RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 SLC39A5Q6ZMH5 540 aa19.11■□□□□ 0.65
UFD1-209ENST00000489406 G2E3Q7L622 706 aa19.11■□□□□ 0.65
UFD1-209ENST00000489406 TRIM43Q96BQ3 446 aaPredicted RBP19.11■□□□□ 0.65
UFD1-209ENST00000489406 PDLIM7Q9NR12 457 aa19.11■□□□□ 0.65
UFD1-209ENST00000489406 SUGT1Q9Y2Z0 365 aa19.11■□□□□ 0.65
UFD1-209ENST00000489406 DNM1LO00429 736 aa19.1■□□□□ 0.65
UFD1-209ENST00000489406 CTNND1O60716 968 aaKnown RBP19.1■□□□□ 0.65
UFD1-209ENST00000489406 BMP1P13497 986 aa19.1■□□□□ 0.65
UFD1-209ENST00000489406 TRIM60Q495X7 471 aa19.1■□□□□ 0.65
UFD1-209ENST00000489406 SPINK5Q9NQ38 1064 aaPredicted RBP19.1■□□□□ 0.65
UFD1-209ENST00000489406 USP40Q9NVE5 1235 aa19.1■□□□□ 0.65
UFD1-209ENST00000489406 DAGLAQ9Y4D2 1042 aa19.1■□□□□ 0.65
UFD1-209ENST00000489406 CNGA1P29973 690 aa19.09■□□□□ 0.65
UFD1-209ENST00000489406 RGS2P41220 211 aa19.09■□□□□ 0.65
UFD1-209ENST00000489406 SPP2Q13103 211 aa19.09■□□□□ 0.65
UFD1-209ENST00000489406 DIXDC1Q155Q3 683 aa19.09■□□□□ 0.65
UFD1-209ENST00000489406 CAVIN4Q5BKX8 364 aa19.09■□□□□ 0.65
UFD1-209ENST00000489406 LPAR1Q92633 364 aa19.09■□□□□ 0.65
UFD1-209ENST00000489406 USP6NLQ92738 828 aa19.09■□□□□ 0.65
UFD1-209ENST00000489406 CHMP4AQ9BY43 222 aa19.09■□□□□ 0.65
UFD1-209ENST00000489406 PUS3Q9BZE2 481 aaKnown RBP19.09■□□□□ 0.65
UFD1-209ENST00000489406 DDX20Q9UHI6 824 aaKnown RBP19.09■□□□□ 0.65
UFD1-209ENST00000489406 IGFBP4P22692 258 aa19.08■□□□□ 0.64
UFD1-209ENST00000489406 MRE11P49959 708 aa19.08■□□□□ 0.64
UFD1-209ENST00000489406 HMGCS2P54868 508 aa19.08■□□□□ 0.64
UFD1-209ENST00000489406 ADGRE1Q14246 886 aa19.08■□□□□ 0.64
UFD1-209ENST00000489406 EPHA10Q5JZY3 1008 aa19.08■□□□□ 0.64
UFD1-209ENST00000489406 GJC2Q5T442 439 aaPredicted RBP19.08■□□□□ 0.64
UFD1-209ENST00000489406 ZSCAN29Q8IWY8 852 aaPredicted RBP19.08■□□□□ 0.64
UFD1-209ENST00000489406 DOCK1Q14185 1865 aa19.07■□□□□ 0.64
UFD1-209ENST00000489406 ITGB8P26012 769 aa19.07■□□□□ 0.64
UFD1-209ENST00000489406 TSPYL6Q8N831 410 aa19.07■□□□□ 0.64
UFD1-209ENST00000489406 LINS1Q8NG48 757 aa19.07■□□□□ 0.64
UFD1-209ENST00000489406 RUNDC1Q96C34 613 aa19.07■□□□□ 0.64
UFD1-209ENST00000489406 P2RX7Q99572 595 aaKnown RBP19.07■□□□□ 0.64
UFD1-209ENST00000489406 STK31Q9BXU1 1019 aa19.07■□□□□ 0.64
UFD1-209ENST00000489406 IFT57Q9NWB7 429 aa19.07■□□□□ 0.64
UFD1-209ENST00000489406 DOCK2Q92608 1830 aa19.07■□□□□ 0.64
UFD1-209ENST00000489406 GNAI1P63096 354 aa19.06■□□□□ 0.64
UFD1-209ENST00000489406 MAP3K10Q02779 954 aa19.06■□□□□ 0.64
UFD1-209ENST00000489406 SH3BP5LQ7L8J4 393 aa19.06■□□□□ 0.64
UFD1-209ENST00000489406 CCAR1Q8IX12 1150 aaKnown RBP19.06■□□□□ 0.64
UFD1-209ENST00000489406 GPRC5AQ8NFJ5 357 aa19.06■□□□□ 0.64
UFD1-209ENST00000489406 APBA2Q99767 749 aa19.06■□□□□ 0.64
UFD1-209ENST00000489406 TXNRD2Q9NNW7 524 aa19.06■□□□□ 0.64
UFD1-209ENST00000489406 CXXC1Q9P0U4 656 aaPredicted RBP19.06■□□□□ 0.64
UFD1-209ENST00000489406 RLFQ13129 1914 aa19.06■□□□□ 0.64
UFD1-209ENST00000489406 MYO9BQ13459 2157 aa19.05■□□□□ 0.64
UFD1-209ENST00000489406 FAM86C2PA6NEL3 165 aa19.05■□□□□ 0.64
UFD1-209ENST00000489406 MSCO60682 206 aa19.05■□□□□ 0.64
UFD1-209ENST00000489406 MAPK4P31152 587 aa19.05■□□□□ 0.64
UFD1-209ENST00000489406 RGS3P49796 1198 aa19.05■□□□□ 0.64
UFD1-209ENST00000489406 TFF2Q03403 129 aa19.05■□□□□ 0.64
UFD1-209ENST00000489406 MORN1Q5T089 497 aa19.05■□□□□ 0.64
UFD1-209ENST00000489406 MFSD14CQ5VZR4 134 aa19.05■□□□□ 0.64
UFD1-209ENST00000489406 PORCNQ9H237 461 aa19.05■□□□□ 0.64
UFD1-209ENST00000489406 TSPYL2Q9H2G4 693 aaPredicted RBP19.05■□□□□ 0.64
UFD1-209ENST00000489406 CACNA1AO00555 2505 aa19.05■□□□□ 0.64
UFD1-209ENST00000489406 PBX2P40425 430 aa19.04■□□□□ 0.64
UFD1-209ENST00000489406 KCNQ1P51787 676 aa19.04■□□□□ 0.64
UFD1-209ENST00000489406 GPR142Q7Z601 462 aa19.04■□□□□ 0.64
UFD1-209ENST00000489406 ZNF280CQ8ND82 737 aa19.04■□□□□ 0.64
UFD1-209ENST00000489406 DNAAF4Q8WXU2 420 aa19.04■□□□□ 0.64
UFD1-209ENST00000489406 C11orf16Q9NQ32 467 aa19.04■□□□□ 0.64
UFD1-209ENST00000489406 FLRT1Q9NZU1 646 aa19.04■□□□□ 0.64
UFD1-209ENST00000489406 LOC285556D6RIA3 1793 aa19.04■□□□□ 0.64
UFD1-209ENST00000489406 DDTLA6NHG4 134 aaPredicted RBP19.03■□□□□ 0.64
UFD1-209ENST00000489406 GPR37L1O60883 481 aa19.03■□□□□ 0.64
UFD1-209ENST00000489406 MYCNP04198 464 aaPredicted RBP19.03■□□□□ 0.64
UFD1-209ENST00000489406 SLC4A2P04920 1241 aa19.03■□□□□ 0.64
UFD1-209ENST00000489406 IRX3P78415 501 aaPredicted RBP19.03■□□□□ 0.64
UFD1-209ENST00000489406 SNX17Q15036 470 aa19.03■□□□□ 0.64
UFD1-209ENST00000489406 Q3C1V9 767 aa19.03■□□□□ 0.64
UFD1-209ENST00000489406 PLEKHH3Q7Z736 793 aa19.03■□□□□ 0.64
UFD1-209ENST00000489406 GRXCR1A8MXD5 290 aa19.02■□□□□ 0.64
UFD1-209ENST00000489406 ENTPD3O75355 529 aa19.02■□□□□ 0.64
UFD1-209ENST00000489406 ZEB1P37275 1124 aaPredicted RBP19.02■□□□□ 0.64
UFD1-209ENST00000489406 TLE2Q04725 743 aa19.02■□□□□ 0.64
UFD1-209ENST00000489406 CCDC129Q6ZRS4 1044 aa19.02■□□□□ 0.64
UFD1-209ENST00000489406 ARRDC4Q8NCT1 418 aa19.02■□□□□ 0.64
UFD1-209ENST00000489406 FERMT2Q96AC1 680 aa19.02■□□□□ 0.64
UFD1-209ENST00000489406 EDC3Q96F86 508 aaKnown RBP19.02■□□□□ 0.64
UFD1-209ENST00000489406 RBPJLQ9UBG7 517 aa19.02■□□□□ 0.64
UFD1-209ENST00000489406 XIRP2A4UGR9 3374 aa19.02■□□□□ 0.63
UFD1-209ENST00000489406 MROH5Q6ZUA9 1318 aa19.01■□□□□ 0.63
UFD1-209ENST00000489406 KBTBD13C9JR72 458 aa19.01■□□□□ 0.63
UFD1-209ENST00000489406 HERVK_113P62684 666 aa19.01■□□□□ 0.63
UFD1-209ENST00000489406 FPGSQ05932 587 aa19.01■□□□□ 0.63
UFD1-209ENST00000489406 MAP2K5Q13163 448 aa19.01■□□□□ 0.63
UFD1-209ENST00000489406 PBX4Q9BYU1 374 aa19.01■□□□□ 0.63
UFD1-209ENST00000489406 CWC22Q9HCG8 908 aaKnown RBP19.01■□□□□ 0.63
UFD1-209ENST00000489406 TACC3Q9Y6A5 838 aa19.01■□□□□ 0.63
UFD1-209ENST00000489406 UTYO14607 1347 aa19■□□□□ 0.63
UFD1-209ENST00000489406 FAM196BA6NMK8 535 aa19■□□□□ 0.63
UFD1-209ENST00000489406 RAG1P15918 1043 aa19■□□□□ 0.63
UFD1-209ENST00000489406 ADCYAP1R1P41586 468 aa19■□□□□ 0.63
UFD1-209ENST00000489406 FKBP5Q13451 457 aaPredicted RBP19■□□□□ 0.63
UFD1-209ENST00000489406 AAK1Q2M2I8 961 aa19■□□□□ 0.63
UFD1-209ENST00000489406 ANO1Q5XXA6 986 aa19■□□□□ 0.63
UFD1-209ENST00000489406 WDR66Q8TBY9 1149 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms