RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ASCC2Q9H1I8 757 aaPredicted RBP20.15■□□□□ 0.82
USP48-210ENST00000489108 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.15■□□□□ 0.82
USP48-210ENST00000489108 ABCF2Q9UG63 623 aa20.15■□□□□ 0.82
USP48-210ENST00000489108 PLXNB2O15031 1838 aa20.15■□□□□ 0.82
USP48-210ENST00000489108 PFASO15067 1338 aa20.14■□□□□ 0.81
USP48-210ENST00000489108 PTPRCP08575 1304 aa20.14■□□□□ 0.81
USP48-210ENST00000489108 CYP2B6P20813 491 aa20.14■□□□□ 0.81
USP48-210ENST00000489108 ADORA1P30542 326 aa20.14■□□□□ 0.81
USP48-210ENST00000489108 HMGCS2P54868 508 aa20.14■□□□□ 0.81
USP48-210ENST00000489108 CCDC102BQ68D86 513 aa20.14■□□□□ 0.81
USP48-210ENST00000489108 SLF2Q8IX21 1173 aa20.14■□□□□ 0.81
USP48-210ENST00000489108 ZNF280CQ8ND82 737 aa20.14■□□□□ 0.81
USP48-210ENST00000489108 CIAO1O76071 339 aa20.13■□□□□ 0.81
USP48-210ENST00000489108 PABPC4Q13310 644 aaKnown RBP eCLIP20.13■□□□□ 0.81
USP48-210ENST00000489108 OSBPL5Q9H0X9 879 aaPredicted RBP20.13■□□□□ 0.81
USP48-210ENST00000489108 FBXO3Q9UK99 471 aa20.13■□□□□ 0.81
USP48-210ENST00000489108 PRKAR2AP13861 404 aaKnown RBP20.12■□□□□ 0.81
USP48-210ENST00000489108 RHBDL3P58872 404 aa20.12■□□□□ 0.81
USP48-210ENST00000489108 RRP1BQ14684 758 aaKnown RBP20.12■□□□□ 0.81
USP48-210ENST00000489108 MAP3K21Q5TCX8 1036 aa20.12■□□□□ 0.81
USP48-210ENST00000489108 LOC285556D6RIA3 1793 aa20.11■□□□□ 0.81
USP48-210ENST00000489108 MROH7-TTC4A0A0A0MT08 1334 aa20.11■□□□□ 0.81
USP48-210ENST00000489108 GPR75-ASB3A0A0A6YYF3 556 aa20.11■□□□□ 0.81
USP48-210ENST00000489108 PEX10O60683 326 aa20.11■□□□□ 0.81
USP48-210ENST00000489108 MDM2Q00987 491 aaPredicted RBP20.11■□□□□ 0.81
USP48-210ENST00000489108 RASGRF1Q13972 1273 aa20.11■□□□□ 0.81
USP48-210ENST00000489108 MORF4L1Q9UBU8 362 aa20.11■□□□□ 0.81
USP48-210ENST00000489108 ZBTB22O15209 634 aa20.1■□□□□ 0.81
USP48-210ENST00000489108 COL6A1P12109 1028 aa20.1■□□□□ 0.81
USP48-210ENST00000489108 CAP2P40123 477 aa20.1■□□□□ 0.81
USP48-210ENST00000489108 TIMM10P62072 90 aa20.1■□□□□ 0.81
USP48-210ENST00000489108 SH3D19Q5HYK7 790 aa20.1■□□□□ 0.81
USP48-210ENST00000489108 SPTY2D1Q68D10 685 aaPredicted RBP20.1■□□□□ 0.81
USP48-210ENST00000489108 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.1■□□□□ 0.81
USP48-210ENST00000489108 PA2G4Q9UQ80 394 aaKnown RBP20.1■□□□□ 0.81
USP48-210ENST00000489108 ATAD5Q96QE3 1844 aa20.1■□□□□ 0.81
USP48-210ENST00000489108 USP17L5A8MUK1 530 aa20.09■□□□□ 0.81
USP48-210ENST00000489108 POTEB2H3BUK9 544 aa20.09■□□□□ 0.81
USP48-210ENST00000489108 NPM3O75607 178 aaKnown RBP20.09■□□□□ 0.81
USP48-210ENST00000489108 IL15P40933 162 aaPredicted RBP20.09■□□□□ 0.81
USP48-210ENST00000489108 MECOMQ03112 1051 aa20.09■□□□□ 0.81
USP48-210ENST00000489108 LRRC26Q2I0M4 334 aa20.09■□□□□ 0.81
USP48-210ENST00000489108 ZNF384Q8TF68 577 aa20.09■□□□□ 0.81
USP48-210ENST00000489108 SSH1Q8WYL5 1049 aa20.09■□□□□ 0.81
USP48-210ENST00000489108 P2RX7Q99572 595 aaKnown RBP20.09■□□□□ 0.81
USP48-210ENST00000489108 NUDT12Q9BQG2 462 aa20.09■□□□□ 0.81
USP48-210ENST00000489108 TBC1D2Q9BYX2 928 aa20.09■□□□□ 0.81
USP48-210ENST00000489108 XRCC5P13010 732 aaKnown RBP20.08■□□□□ 0.81
USP48-210ENST00000489108 CACNB2Q08289 660 aaPredicted RBP20.08■□□□□ 0.81
USP48-210ENST00000489108 ERICH6Q7L0X2 663 aa20.08■□□□□ 0.81
USP48-210ENST00000489108 GUCD1Q96NT3 240 aa20.08■□□□□ 0.81
USP48-210ENST00000489108 IRX3P78415 501 aaPredicted RBP20.07■□□□□ 0.8
USP48-210ENST00000489108 LHX8Q68G74 356 aa20.07■□□□□ 0.8
USP48-210ENST00000489108 TXNRD2Q9NNW7 524 aa20.07■□□□□ 0.8
USP48-210ENST00000489108 PDS5AQ29RF7 1337 aaKnown RBP20.06■□□□□ 0.8
USP48-210ENST00000489108 UBTFL1P0CB47 393 aaPredicted RBP20.06■□□□□ 0.8
USP48-210ENST00000489108 CCND3P30281 292 aaPredicted RBP20.06■□□□□ 0.8
USP48-210ENST00000489108 FAM109BQ6ICB4 259 aaPredicted RBP20.06■□□□□ 0.8
USP48-210ENST00000489108 GPRC5AQ8NFJ5 357 aa20.06■□□□□ 0.8
USP48-210ENST00000489108 FAM161BQ96MY7 647 aa20.06■□□□□ 0.8
USP48-210ENST00000489108 AS3MTQ9HBK9 375 aa20.06■□□□□ 0.8
USP48-210ENST00000489108 ZKSCAN1P17029 563 aaPredicted RBP20.05■□□□□ 0.8
USP48-210ENST00000489108 HOXA7P31268 230 aaPredicted RBP20.05■□□□□ 0.8
USP48-210ENST00000489108 MTMR2Q13614 643 aa20.05■□□□□ 0.8
USP48-210ENST00000489108 CCL14Q16627 93 aa20.05■□□□□ 0.8
USP48-210ENST00000489108 Q3C1V9 767 aa20.05■□□□□ 0.8
USP48-210ENST00000489108 SOCS4Q8WXH5 440 aa20.05■□□□□ 0.8
USP48-210ENST00000489108 USP6NLQ92738 828 aa20.05■□□□□ 0.8
USP48-210ENST00000489108 WDR18Q9BV38 432 aa20.05■□□□□ 0.8
USP48-210ENST00000489108 RBPJLQ9UBG7 517 aa20.05■□□□□ 0.8
USP48-210ENST00000489108 LAMA2P24043 3122 aaKnown RBP20.04■□□□□ 0.8
USP48-210ENST00000489108 LDHCP07864 332 aa20.04■□□□□ 0.8
USP48-210ENST00000489108 BACE1P56817 501 aa20.04■□□□□ 0.8
USP48-210ENST00000489108 HERVK_113P62684 666 aa20.04■□□□□ 0.8
USP48-210ENST00000489108 TBC1D9Q6ZT07 1266 aa20.04■□□□□ 0.8
USP48-210ENST00000489108 TRMT44Q8IYL2 757 aaKnown RBP20.04■□□□□ 0.8
USP48-210ENST00000489108 FAM9BQ8IZU0 186 aa20.04■□□□□ 0.8
USP48-210ENST00000489108 XAGE2Q96GT9 111 aa20.04■□□□□ 0.8
USP48-210ENST00000489108 COPRSQ9NQ92 184 aa20.04■□□□□ 0.8
USP48-210ENST00000489108 TMOD4Q9NZQ9 345 aa20.04■□□□□ 0.8
USP48-210ENST00000489108 A0A1B0GUL7 405 aa20.03■□□□□ 0.8
USP48-210ENST00000489108 MAP4K4O95819 1239 aaPredicted RBP20.03■□□□□ 0.8
USP48-210ENST00000489108 JAG1P78504 1218 aa20.03■□□□□ 0.8
USP48-210ENST00000489108 PDE3AQ14432 1141 aa20.03■□□□□ 0.8
USP48-210ENST00000489108 NSUN4Q96CB9 384 aaKnown RBP20.03■□□□□ 0.8
USP48-210ENST00000489108 PORCNQ9H237 461 aa20.03■□□□□ 0.8
USP48-210ENST00000489108 HERC5Q9UII4 1024 aaKnown RBP20.03■□□□□ 0.8
USP48-210ENST00000489108 ZNF521Q96K83 1311 aa20.02■□□□□ 0.8
USP48-210ENST00000489108 DNAH12Q6ZR08 3092 aa20.02■□□□□ 0.8
USP48-210ENST00000489108 MAPK4P31152 587 aa20.02■□□□□ 0.8
USP48-210ENST00000489108 GSTO1P78417 241 aa20.02■□□□□ 0.8
USP48-210ENST00000489108 MORN1Q5T089 497 aa20.02■□□□□ 0.8
USP48-210ENST00000489108 CCAR1Q8IX12 1150 aaKnown RBP20.02■□□□□ 0.8
USP48-210ENST00000489108 LBHD1Q9BQE6 289 aaPredicted RBP20.02■□□□□ 0.8
USP48-210ENST00000489108 HMG20BQ9P0W2 317 aa20.02■□□□□ 0.8
USP48-210ENST00000489108 COL2A1P02458 1487 aaPredicted RBP20.02■□□□□ 0.8
USP48-210ENST00000489108 RGS2P41220 211 aa20.01■□□□□ 0.79
USP48-210ENST00000489108 ERVK-9P63128 1117 aa20.01■□□□□ 0.79
USP48-210ENST00000489108 ERVK-24P63145 666 aa20.01■□□□□ 0.79
USP48-210ENST00000489108 MVPQ14764 893 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 616.9 ms