RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 MS4A4AQ96JQ5 239 aa17.26■□□□□ 0.35
BRCA1-218ENST00000489037 SAP30BPQ9UHR5 308 aaKnown RBP17.26■□□□□ 0.35
BRCA1-218ENST00000489037 DOCK1Q14185 1865 aa17.26■□□□□ 0.35
BRCA1-218ENST00000489037 IGF2BP3O00425 579 aaKnown RBP eCLIP17.25■□□□□ 0.35
BRCA1-218ENST00000489037 ADD2P35612 726 aa17.25■□□□□ 0.35
BRCA1-218ENST00000489037 TTC6Q86TZ1 520 aa17.25■□□□□ 0.35
BRCA1-218ENST00000489037 CFHR5Q9BXR6 569 aa17.25■□□□□ 0.35
BRCA1-218ENST00000489037 PALD1Q9ULE6 856 aa17.25■□□□□ 0.35
BRCA1-218ENST00000489037 GLRX3O76003 335 aaKnown RBP17.24■□□□□ 0.35
BRCA1-218ENST00000489037 UBE3CQ15386 1083 aa17.24■□□□□ 0.35
BRCA1-218ENST00000489037 NOM1Q5C9Z4 860 aaKnown RBP17.24■□□□□ 0.35
BRCA1-218ENST00000489037 BRI3BPQ8WY22 251 aa17.24■□□□□ 0.35
BRCA1-218ENST00000489037 RIOK1Q9BRS2 568 aaKnown RBP17.24■□□□□ 0.35
BRCA1-218ENST00000489037 ZHX2Q9Y6X8 837 aa17.24■□□□□ 0.35
BRCA1-218ENST00000489037 ATAD5Q96QE3 1844 aa17.24■□□□□ 0.35
BRCA1-218ENST00000489037 TCRBV5S4A2TA0A5A2 114 aa17.23■□□□□ 0.35
BRCA1-218ENST00000489037 FAM196BA6NMK8 535 aa17.23■□□□□ 0.35
BRCA1-218ENST00000489037 GPR25O00155 361 aa17.23■□□□□ 0.35
BRCA1-218ENST00000489037 CXCL11O14625 94 aa17.23■□□□□ 0.35
BRCA1-218ENST00000489037 POLR3DP05423 398 aaPredicted RBP17.23■□□□□ 0.35
BRCA1-218ENST00000489037 PTPRAP18433 802 aa17.23■□□□□ 0.35
BRCA1-218ENST00000489037 MX1P20591 662 aa17.23■□□□□ 0.35
BRCA1-218ENST00000489037 TAF1CQ15572 869 aaPredicted RBP17.23■□□□□ 0.35
BRCA1-218ENST00000489037 DDRGK1Q96HY6 314 aa17.23■□□□□ 0.35
BRCA1-218ENST00000489037 PTPN18Q99952 460 aa17.23■□□□□ 0.35
BRCA1-218ENST00000489037 ZFYVE28Q9HCC9 887 aa17.23■□□□□ 0.35
BRCA1-218ENST00000489037 NAV1Q8NEY1 1877 aa17.22■□□□□ 0.35
BRCA1-218ENST00000489037 FKTNO75072 461 aa17.22■□□□□ 0.35
BRCA1-218ENST00000489037 IFFO2Q5TF58 517 aa17.22■□□□□ 0.35
BRCA1-218ENST00000489037 TSHZ3Q63HK5 1081 aa17.22■□□□□ 0.35
BRCA1-218ENST00000489037 KBTBD3Q8NAB2 608 aa17.22■□□□□ 0.35
BRCA1-218ENST00000489037 ZNF296Q8WUU4 475 aaPredicted RBP17.22■□□□□ 0.35
BRCA1-218ENST00000489037 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
BRCA1-218ENST00000489037 ZCCHC17Q9NP64 241 aaKnown RBP17.22■□□□□ 0.35
BRCA1-218ENST00000489037 KCNH4Q9UQ05 1017 aa17.22■□□□□ 0.35
BRCA1-218ENST00000489037 MBD4O95243 580 aa17.21■□□□□ 0.35
BRCA1-218ENST00000489037 ZFYP08048 801 aaPredicted RBP17.21■□□□□ 0.35
BRCA1-218ENST00000489037 SLURP2P0DP57 97 aa17.21■□□□□ 0.35
BRCA1-218ENST00000489037 CAP2P40123 477 aa17.21■□□□□ 0.35
BRCA1-218ENST00000489037 DGKZQ13574 1117 aa17.21■□□□□ 0.35
BRCA1-218ENST00000489037 FASTKD5Q7L8L6 764 aaKnown RBP17.21■□□□□ 0.35
BRCA1-218ENST00000489037 AMOTL1Q8IY63 956 aa17.21■□□□□ 0.35
BRCA1-218ENST00000489037 LCORLQ8N3X6 602 aa17.21■□□□□ 0.35
BRCA1-218ENST00000489037 ARMT1Q9H993 441 aa17.21■□□□□ 0.35
BRCA1-218ENST00000489037 AS3MTQ9HBK9 375 aa17.21■□□□□ 0.35
BRCA1-218ENST00000489037 SIPA1L1O43166 1804 aa17.2■□□□□ 0.34
BRCA1-218ENST00000489037 BTBD19C9JJ37 291 aa17.2■□□□□ 0.34
BRCA1-218ENST00000489037 CRHR2Q13324 411 aa17.2■□□□□ 0.34
BRCA1-218ENST00000489037 SLC4A8Q2Y0W8 1093 aa17.2■□□□□ 0.34
BRCA1-218ENST00000489037 METTL16Q86W50 562 aaKnown RBP17.2■□□□□ 0.34
BRCA1-218ENST00000489037 FAM43AQ8N2R8 423 aa17.2■□□□□ 0.34
BRCA1-218ENST00000489037 GINM1Q9NU53 330 aa17.2■□□□□ 0.34
BRCA1-218ENST00000489037 MCM9Q9NXL9 1143 aa17.2■□□□□ 0.34
BRCA1-218ENST00000489037 SERPINB13Q9UIV8 391 aa17.2■□□□□ 0.34
BRCA1-218ENST00000489037 AFG3L2Q9Y4W6 797 aa17.2■□□□□ 0.34
BRCA1-218ENST00000489037 PHIPQ8WWQ0 1821 aa17.19■□□□□ 0.34
BRCA1-218ENST00000489037 USP17L5A8MUK1 530 aa17.19■□□□□ 0.34
BRCA1-218ENST00000489037 RNF113AO15541 343 aaKnown RBP17.19■□□□□ 0.34
BRCA1-218ENST00000489037 ASNSP08243 561 aa17.19■□□□□ 0.34
BRCA1-218ENST00000489037 B4GALNT3Q6L9W6 998 aa17.19■□□□□ 0.34
BRCA1-218ENST00000489037 CTU1Q7Z7A3 348 aaKnown RBP17.19■□□□□ 0.34
BRCA1-218ENST00000489037 ANKRD23Q86SG2 305 aa17.19■□□□□ 0.34
BRCA1-218ENST00000489037 SMC5Q8IY18 1101 aa17.19■□□□□ 0.34
BRCA1-218ENST00000489037 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
BRCA1-218ENST00000489037 SDR42E1Q8WUS8 393 aa17.19■□□□□ 0.34
BRCA1-218ENST00000489037 EHD4Q9H223 541 aa17.19■□□□□ 0.34
BRCA1-218ENST00000489037 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
BRCA1-218ENST00000489037 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
BRCA1-218ENST00000489037 PTPRFP10586 1907 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 MYH8P13535 1937 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 TRIM75PA6NK02 468 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 IRX6P78412 446 aaPredicted RBP17.18■□□□□ 0.34
BRCA1-218ENST00000489037 GADL1Q6ZQY3 521 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 PI4K2BQ8TCG2 481 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 ERO1AQ96HE7 468 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 LNPKQ9C0E8 428 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 MCOLN1Q9GZU1 580 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 R3HDMLQ9H3Y0 253 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 SLC4A4Q9Y6R1 1079 aa17.18■□□□□ 0.34
BRCA1-218ENST00000489037 A0A0G2JLL6 359 aaPredicted RBP17.17■□□□□ 0.34
BRCA1-218ENST00000489037 PDHXO00330 501 aa17.17■□□□□ 0.34
BRCA1-218ENST00000489037 IGHDP01880 384 aa17.17■□□□□ 0.34
BRCA1-218ENST00000489037 ARHGEF6Q15052 776 aa17.17■□□□□ 0.34
BRCA1-218ENST00000489037 PKN2Q16513 984 aaKnown RBP17.17■□□□□ 0.34
BRCA1-218ENST00000489037 SLFNL1Q499Z3 407 aa17.17■□□□□ 0.34
BRCA1-218ENST00000489037 PRRT2Q7Z6L0 340 aaPredicted RBP17.17■□□□□ 0.34
BRCA1-218ENST00000489037 ZNF280CQ8ND82 737 aa17.17■□□□□ 0.34
BRCA1-218ENST00000489037 APPBP2Q92624 585 aa17.17■□□□□ 0.34
BRCA1-218ENST00000489037 DCP1AQ9NPI6 582 aaPredicted RBP17.17■□□□□ 0.34
BRCA1-218ENST00000489037 STAP2Q9UGK3 403 aa17.17■□□□□ 0.34
BRCA1-218ENST00000489037 GDF11O95390 407 aa17.16■□□□□ 0.34
BRCA1-218ENST00000489037 PDE1AP54750 535 aa17.16■□□□□ 0.34
BRCA1-218ENST00000489037 SP3Q02447 781 aa17.16■□□□□ 0.34
BRCA1-218ENST00000489037 SPP2Q13103 211 aa17.16■□□□□ 0.34
BRCA1-218ENST00000489037 CERKLQ49MI3 558 aaPredicted RBP17.16■□□□□ 0.34
BRCA1-218ENST00000489037 CHD1LQ86WJ1 897 aa17.16■□□□□ 0.34
BRCA1-218ENST00000489037 PUS7LQ9H0K6 701 aaKnown RBP17.16■□□□□ 0.34
BRCA1-218ENST00000489037 DNAJC18Q9H819 358 aa17.16■□□□□ 0.34
BRCA1-218ENST00000489037 CABP5Q9NP86 173 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms