RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 PPP2R3BQ9Y5P8 575 aa7.92□□□□□ -1.14
PTPRD-212ENST00000488774 COL2A1P02458 1487 aaPredicted RBP7.92□□□□□ -1.14
PTPRD-212ENST00000488774 TNRC18O15417 2968 aaPredicted RBP7.91□□□□□ -1.14
PTPRD-212ENST00000488774 A0A0D9SFI3 127 aa7.91□□□□□ -1.14
PTPRD-212ENST00000488774 HSPA8P11142 646 aaKnown RBP7.91□□□□□ -1.14
PTPRD-212ENST00000488774 COL13A1Q5TAT6 717 aaPredicted RBP7.91□□□□□ -1.14
PTPRD-212ENST00000488774 VPS53Q5VIR6 699 aa7.91□□□□□ -1.14
PTPRD-212ENST00000488774 ZNF589Q86UQ0 364 aaPredicted RBP7.91□□□□□ -1.14
PTPRD-212ENST00000488774 KBTBD3Q8NAB2 608 aa7.91□□□□□ -1.14
PTPRD-212ENST00000488774 GCC1Q96CN9 775 aa7.91□□□□□ -1.14
PTPRD-212ENST00000488774 OPTNQ96CV9 577 aa7.91□□□□□ -1.14
PTPRD-212ENST00000488774 DYNLL2Q96FJ2 89 aa7.91□□□□□ -1.14
PTPRD-212ENST00000488774 FAM227BQ96M60 508 aa7.91□□□□□ -1.14
PTPRD-212ENST00000488774 WRNIP1Q96S55 665 aa7.91□□□□□ -1.14
PTPRD-212ENST00000488774 ZNFX1Q9P2E3 1918 aaKnown RBP7.91□□□□□ -1.14
PTPRD-212ENST00000488774 TTC41PQ6P2S7 1318 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 MAGEB6P1A0A0J9YX57 407 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 GSG1L2A8MUP6 293 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 PEX10O60683 326 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 ENTPD3O75355 529 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 GUCY1A2P33402 732 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 GSTO1P78417 241 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 MAP3K9P80192 1104 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 POTEEQ6S8J3 1075 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 METTL16Q86W50 562 aaKnown RBP7.9□□□□□ -1.14
PTPRD-212ENST00000488774 CLEC10AQ8IUN9 316 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 BRI3BPQ8WY22 251 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 OTUD5Q96G74 571 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 STRBPQ96SI9 672 aaKnown RBP7.9□□□□□ -1.14
PTPRD-212ENST00000488774 RWDD1Q9H446 243 aaPredicted RBP7.9□□□□□ -1.14
PTPRD-212ENST00000488774 DCP1AQ9NPI6 582 aaPredicted RBP7.9□□□□□ -1.14
PTPRD-212ENST00000488774 INCENPQ9NQS7 918 aa7.9□□□□□ -1.14
PTPRD-212ENST00000488774 IRF6O14896 467 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 RNF113AO15541 343 aaKnown RBP7.89□□□□□ -1.15
PTPRD-212ENST00000488774 GDF11O95390 407 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 LDHCP07864 332 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 SHMT1P34896 483 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 FKBP1BP68106 108 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 GABPAQ06546 454 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 MAP3K12Q12852 859 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 TNFAIP1Q13829 316 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 COL9A3Q14050 684 aaPredicted RBP7.89□□□□□ -1.15
PTPRD-212ENST00000488774 SUPT20HL1Q3ZLR7 823 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 KIAA1755Q5JYT7 1200 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 ZMYM1Q5SVZ6 1142 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 ARMC9Q7Z3E5 817 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 ZSCAN29Q8IWY8 852 aaPredicted RBP7.89□□□□□ -1.15
PTPRD-212ENST00000488774 STK11IPQ8N1F8 1099 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 NBPF3Q9H094 633 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 OSBPL3Q9H4L5 887 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 RNF186Q9NXI6 227 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 TMOD2Q9NZR1 351 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 A0A0G2JMZ2 1700 aa7.89□□□□□ -1.15
PTPRD-212ENST00000488774 SPDYE5A6NIY4 337 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 GPAA1O43292 621 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 GLRX3O76003 335 aaKnown RBP7.88□□□□□ -1.15
PTPRD-212ENST00000488774 TBC1D8O95759 1140 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 TNNI2P48788 182 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 LBX1P52954 281 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 NMIQ13287 307 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-212ENST00000488774 TTF1Q15361 905 aaPredicted RBP7.88□□□□□ -1.15
PTPRD-212ENST00000488774 UBE3CQ15386 1083 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 GPAT2Q6NUI2 795 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 CTR9Q6PD62 1173 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 SIAH1Q8IUQ4 282 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 ANKRD13AQ8IZ07 590 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 FAM43AQ8N2R8 423 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 SLC10A4Q96EP9 437 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 ZNF341Q9BYN7 854 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 TAF6LQ9Y6J9 622 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 LCTP09848 1927 aa7.88□□□□□ -1.15
PTPRD-212ENST00000488774 PPP1R12BO60237 982 aaPredicted RBP7.87□□□□□ -1.15
PTPRD-212ENST00000488774 TBC1D12O60347 775 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 TRPA1O75762 1119 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 PTPRAP18433 802 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 SDSP20132 328 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 CTGFP29279 349 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 NF2P35240 595 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 MAP2K2P36507 400 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 IREB2P48200 963 aaKnown RBP7.87□□□□□ -1.15
PTPRD-212ENST00000488774 TM4SF4P48230 202 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 NOGQ13253 232 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 AAMPQ13685 434 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 NOL9Q5SY16 702 aaKnown RBP7.87□□□□□ -1.15
PTPRD-212ENST00000488774 SLF2Q8IX21 1173 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 APPBP2Q92624 585 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 FSD1Q9BTV5 496 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.87□□□□□ -1.15
PTPRD-212ENST00000488774 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.87□□□□□ -1.15
PTPRD-212ENST00000488774 AFG3L2Q9Y4W6 797 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 SLC4A4Q9Y6R1 1079 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 DNAH12Q6ZR08 3092 aa7.87□□□□□ -1.15
PTPRD-212ENST00000488774 MYH6P13533 1939 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 ADGRA2Q96PE1 1338 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 A0A1W2PRG0 241 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 TESPA1A2RU30 521 aaPredicted RBP7.86□□□□□ -1.15
PTPRD-212ENST00000488774 BTBD19C9JJ37 291 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 USP17L12C9JPN9 530 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 USP17L21D6R901 530 aa7.86□□□□□ -1.15
PTPRD-212ENST00000488774 CAPN15O75808 1086 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms