RNA–Protein interactions for RNA: ENST00000488623.5

CTNS-206, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-206ENST00000488623 DYNLL2Q96FJ2 89 aa17.91■□□□□ 0.46
CTNS-206ENST00000488623 TMOD2Q9NZR1 351 aa17.91■□□□□ 0.46
CTNS-206ENST00000488623 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.91■□□□□ 0.46
CTNS-206ENST00000488623 B4E1Z4 1266 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 MYO1BO43795 1136 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 ST18O60284 1047 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 APLP1P51693 650 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 FSTL1Q12841 308 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 TRDNQ13061 729 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 FKBP1CQ5VVH2 108 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 CYB5R4Q7L1T6 521 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 TTC6Q86TZ1 520 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 IL27Q8NEV9 243 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 TRPM4Q8TD43 1214 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 TCEANC2Q96MN5 208 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 TBC1D2Q9BYX2 928 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 ALDH8A1Q9H2A2 487 aaPredicted RBP17.9■□□□□ 0.46
CTNS-206ENST00000488623 RNF41Q9H4P4 317 aaPredicted RBP17.9■□□□□ 0.46
CTNS-206ENST00000488623 SCN4AP35499 1836 aa17.9■□□□□ 0.46
CTNS-206ENST00000488623 DDTLA6NHG4 134 aaPredicted RBP17.89■□□□□ 0.45
CTNS-206ENST00000488623 SLC3A2P08195 630 aaKnown RBP17.89■□□□□ 0.45
CTNS-206ENST00000488623 HIRAP54198 1017 aaPredicted RBP17.89■□□□□ 0.45
CTNS-206ENST00000488623 ANTXR2P58335 489 aa17.89■□□□□ 0.45
CTNS-206ENST00000488623 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
CTNS-206ENST00000488623 RALYLQ86SE5 291 aaKnown RBP17.89■□□□□ 0.45
CTNS-206ENST00000488623 L3MBTL3Q96JM7 780 aaPredicted RBP17.89■□□□□ 0.45
CTNS-206ENST00000488623 KRT23Q9C075 422 aa17.89■□□□□ 0.45
CTNS-206ENST00000488623 CNNM2Q9H8M5 875 aa17.89■□□□□ 0.45
CTNS-206ENST00000488623 VEZTQ9HBM0 779 aa17.89■□□□□ 0.45
CTNS-206ENST00000488623 ZSWIM5Q9P217 1185 aa17.89■□□□□ 0.45
CTNS-206ENST00000488623 ASTN2O75129 1339 aaPredicted RBP17.89■□□□□ 0.45
CTNS-206ENST00000488623 CNTNAP1P78357 1384 aa17.89■□□□□ 0.45
CTNS-206ENST00000488623 ROBO3Q96MS0 1386 aa17.89■□□□□ 0.45
CTNS-206ENST00000488623 ORC4O43929 436 aa17.88■□□□□ 0.45
CTNS-206ENST00000488623 PRDM1O75626 825 aa17.88■□□□□ 0.45
CTNS-206ENST00000488623 PCP11498 1178 aaKnown RBP17.88■□□□□ 0.45
CTNS-206ENST00000488623 MCM5P33992 734 aa17.88■□□□□ 0.45
CTNS-206ENST00000488623 AK2P54819 239 aa17.88■□□□□ 0.45
CTNS-206ENST00000488623 RRP12Q5JTH9 1297 aaKnown RBP17.88■□□□□ 0.45
CTNS-206ENST00000488623 C16orf86Q6ZW13 317 aa17.88■□□□□ 0.45
CTNS-206ENST00000488623 SMC1BQ8NDV3 1235 aa17.88■□□□□ 0.45
CTNS-206ENST00000488623 FAM151AQ8WW52 585 aa17.88■□□□□ 0.45
CTNS-206ENST00000488623 LRRC2Q9BYS8 371 aa17.88■□□□□ 0.45
CTNS-206ENST00000488623 DHX36Q9H2U1 1008 aaKnown RBP17.88■□□□□ 0.45
CTNS-206ENST00000488623 TOMM22Q9NS69 142 aa17.88■□□□□ 0.45
CTNS-206ENST00000488623 POTECB2RU33 542 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 PRC1O43663 620 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 KDM4AO75164 1064 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 LMOD1P29536 600 aaPredicted RBP17.87■□□□□ 0.45
CTNS-206ENST00000488623 CDK8P49336 464 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 GABPAQ06546 454 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 PDE4BQ07343 736 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 TOB2Q14106 344 aaPredicted RBP17.87■□□□□ 0.45
CTNS-206ENST00000488623 Q6ZUG5 572 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 FAM83AQ86UY5 434 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 SLC44A5Q8NCS7 719 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 IPO9Q96P70 1041 aaKnown RBP17.87■□□□□ 0.45
CTNS-206ENST00000488623 LARP6Q9BRS8 491 aaKnown RBP17.87■□□□□ 0.45
CTNS-206ENST00000488623 PGAP2Q9UHJ9 254 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 HACL1Q9UJ83 578 aa17.87■□□□□ 0.45
CTNS-206ENST00000488623 HLA-DOAP06340 250 aa17.86■□□□□ 0.45
CTNS-206ENST00000488623 SLURP2P0DP57 97 aa17.86■□□□□ 0.45
CTNS-206ENST00000488623 SLC4A3P48751 1232 aa17.86■□□□□ 0.45
CTNS-206ENST00000488623 BECN1Q14457 450 aa17.86■□□□□ 0.45
CTNS-206ENST00000488623 HSCBQ8IWL3 235 aa17.86■□□□□ 0.45
CTNS-206ENST00000488623 ZSCAN29Q8IWY8 852 aaPredicted RBP17.86■□□□□ 0.45
CTNS-206ENST00000488623 ADARB2Q9NS39 739 aaKnown RBP17.86■□□□□ 0.45
CTNS-206ENST00000488623 SCAF8Q9UPN6 1271 aaKnown RBP17.86■□□□□ 0.45
CTNS-206ENST00000488623 WDR19Q8NEZ3 1342 aa17.86■□□□□ 0.45
CTNS-206ENST00000488623 SIPA1L1O43166 1804 aa17.85■□□□□ 0.45
CTNS-206ENST00000488623 COL2A1P02458 1487 aaPredicted RBP17.85■□□□□ 0.45
CTNS-206ENST00000488623 ATRNL1Q5VV63 1379 aa17.85■□□□□ 0.45
CTNS-206ENST00000488623 NOL8Q76FK4 1167 aaKnown RBP17.85■□□□□ 0.45
CTNS-206ENST00000488623 FOXP4Q8IVH2 680 aaPredicted RBP17.85■□□□□ 0.45
CTNS-206ENST00000488623 ESR2Q92731 530 aa17.85■□□□□ 0.45
CTNS-206ENST00000488623 AGXT2Q9BYV1 514 aa17.85■□□□□ 0.45
CTNS-206ENST00000488623 TMEM39BQ9GZU3 492 aa17.85■□□□□ 0.45
CTNS-206ENST00000488623 EHD4Q9H223 541 aa17.85■□□□□ 0.45
CTNS-206ENST00000488623 MKNK2Q9HBH9 465 aa17.85■□□□□ 0.45
CTNS-206ENST00000488623 GPHNQ9NQX3 736 aaPredicted RBP17.85■□□□□ 0.45
CTNS-206ENST00000488623 PI4KBQ9UBF8 816 aa17.85■□□□□ 0.45
CTNS-206ENST00000488623 SERPINB13Q9UIV8 391 aa17.85■□□□□ 0.45
CTNS-206ENST00000488623 RANBP6O60518 1105 aaKnown RBP17.84■□□□□ 0.45
CTNS-206ENST00000488623 RASA1P20936 1047 aa17.84■□□□□ 0.45
CTNS-206ENST00000488623 MCM2P49736 904 aa17.84■□□□□ 0.45
CTNS-206ENST00000488623 RASA3Q14644 834 aa17.84■□□□□ 0.45
CTNS-206ENST00000488623 FAM47AQ5JRC9 791 aa17.84■□□□□ 0.45
CTNS-206ENST00000488623 METTL16Q86W50 562 aaKnown RBP17.84■□□□□ 0.45
CTNS-206ENST00000488623 FBXL16Q8N461 479 aa17.84■□□□□ 0.45
CTNS-206ENST00000488623 IGDCC4Q8TDY8 1250 aa17.84■□□□□ 0.45
CTNS-206ENST00000488623 POLR2AP24928 1970 aaKnown RBP17.84■□□□□ 0.45
CTNS-206ENST00000488623 K7ELQ4 463 aaPredicted RBP17.83■□□□□ 0.44
CTNS-206ENST00000488623 TNNI2P48788 182 aa17.83■□□□□ 0.44
CTNS-206ENST00000488623 ANGEL2Q5VTE6 544 aaKnown RBP17.83■□□□□ 0.44
CTNS-206ENST00000488623 CDAN1Q8IWY9 1227 aa17.83■□□□□ 0.44
CTNS-206ENST00000488623 ZNF444Q8N0Y2 327 aaPredicted RBP17.83■□□□□ 0.44
CTNS-206ENST00000488623 ZKSCAN3Q9BRR0 538 aa17.83■□□□□ 0.44
CTNS-206ENST00000488623 DNAJC18Q9H819 358 aa17.83■□□□□ 0.44
CTNS-206ENST00000488623 SWAP70Q9UH65 585 aa17.83■□□□□ 0.44
CTNS-206ENST00000488623 LIMCH1Q9UPQ0 1083 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms