RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CHMLP26374 656 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 INPP5BP32019 993 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 TDO2P48775 406 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 VGLL4Q14135 290 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 MAP3K11Q16584 847 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 MCMDC2Q4G0Z9 681 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 CYP4F22Q6NT55 531 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 TICAM2Q86XR7 235 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 CRACR2BQ8N4Y2 399 aaPredicted RBP13.24□□□□□ -0.29
UBE4B-210ENST00000488228 KLRG1Q96E93 195 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 ATP8A2Q9NTI2 1148 aa13.24□□□□□ -0.29
UBE4B-210ENST00000488228 LOC285556D6RIA3 1793 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 USP17L12C9JPN9 530 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 USP17L21D6R901 530 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 APPP05067 770 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 GNAT2P19087 354 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 PLCD1P51178 756 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 LDLRAD1Q5T700 205 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.23□□□□□ -0.29
UBE4B-210ENST00000488228 RASAL3Q86YV0 1011 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 SLC44A5Q8NCS7 719 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 ZKSCAN4Q969J2 545 aaPredicted RBP13.23□□□□□ -0.29
UBE4B-210ENST00000488228 DDRGK1Q96HY6 314 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 ELP3Q9H9T3 547 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBE4B-210ENST00000488228 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.23□□□□□ -0.29
UBE4B-210ENST00000488228 PI4KBQ9UBF8 816 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 ARPP21Q9UBL0 812 aaPredicted RBP13.23□□□□□ -0.29
UBE4B-210ENST00000488228 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 MYH4Q9Y623 1939 aa13.23□□□□□ -0.29
UBE4B-210ENST00000488228 ROBO3Q96MS0 1386 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 RAD50Q92878 1312 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
UBE4B-210ENST00000488228 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
UBE4B-210ENST00000488228 RRP1BQ14684 758 aaKnown RBP13.22□□□□□ -0.29
UBE4B-210ENST00000488228 SHROOM1Q2M3G4 852 aaPredicted RBP13.22□□□□□ -0.29
UBE4B-210ENST00000488228 RGMBQ6NW40 437 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 CTR9Q6PD62 1173 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 ANKRD13AQ8IZ07 590 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 DYNLL2Q96FJ2 89 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 CAPNS2Q96L46 248 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 TRIM34Q9BYJ4 488 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 EHD4Q9H223 541 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 SERPINB13Q9UIV8 391 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 SNCAIPQ9Y6H5 919 aa13.22□□□□□ -0.29
UBE4B-210ENST00000488228 PHF20L1A8MW92 1017 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 CDC45O75419 566 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 GDF11O95390 407 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 SLC10A3P09131 477 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 VEGFBP49765 207 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 MAP3K9P80192 1104 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 DEFB115Q30KQ5 88 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 C12orf60Q5U649 245 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 GIMAP6Q6P9H5 292 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 TTC6Q86TZ1 520 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 AMOTL1Q8IY63 956 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 STK11IPQ8N1F8 1099 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 HHIPL1Q96JK4 782 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 NAPBQ9H115 298 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 HERC5Q9UII4 1024 aaKnown RBP13.21□□□□□ -0.29
UBE4B-210ENST00000488228 ZNF112Q9UJU3 913 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 CSADQ9Y600 493 aa13.21□□□□□ -0.29
UBE4B-210ENST00000488228 MINDY4BA8MYZ0 360 aa13.2□□□□□ -0.3
UBE4B-210ENST00000488228 FAM155AB1AL88 458 aaPredicted RBP13.2□□□□□ -0.3
UBE4B-210ENST00000488228 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
UBE4B-210ENST00000488228 TBC1D12O60347 775 aa13.2□□□□□ -0.3
UBE4B-210ENST00000488228 AOC2O75106 756 aa13.2□□□□□ -0.3
UBE4B-210ENST00000488228 HSPD1P10809 573 aaKnown RBP13.2□□□□□ -0.3
UBE4B-210ENST00000488228 SHMT1P34896 483 aa13.2□□□□□ -0.3
UBE4B-210ENST00000488228 MFAP1P55081 439 aaKnown RBP13.2□□□□□ -0.3
UBE4B-210ENST00000488228 MAP3K10Q02779 954 aa13.2□□□□□ -0.3
UBE4B-210ENST00000488228 GABPAQ06546 454 aa13.2□□□□□ -0.3
UBE4B-210ENST00000488228 CCDC84Q86UT8 332 aaPredicted RBP13.2□□□□□ -0.3
UBE4B-210ENST00000488228 METTL16Q86W50 562 aaKnown RBP13.2□□□□□ -0.3
UBE4B-210ENST00000488228 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
UBE4B-210ENST00000488228 ZMYM6O95789 1325 aa13.19□□□□□ -0.3
UBE4B-210ENST00000488228 SGSM2O43147 1006 aa13.19□□□□□ -0.3
UBE4B-210ENST00000488228 GJA5P36382 358 aa13.19□□□□□ -0.3
UBE4B-210ENST00000488228 JAG1P78504 1218 aa13.19□□□□□ -0.3
UBE4B-210ENST00000488228 NOL9Q5SY16 702 aaKnown RBP13.19□□□□□ -0.3
UBE4B-210ENST00000488228 FOXP4Q8IVH2 680 aaPredicted RBP13.19□□□□□ -0.3
UBE4B-210ENST00000488228 SCYL3Q8IZE3 742 aa13.19□□□□□ -0.3
UBE4B-210ENST00000488228 RUFY2Q8WXA3 655 aa13.19□□□□□ -0.3
UBE4B-210ENST00000488228 OPTNQ96CV9 577 aa13.19□□□□□ -0.3
UBE4B-210ENST00000488228 OTUD5Q96G74 571 aa13.19□□□□□ -0.3
UBE4B-210ENST00000488228 ZIC5Q96T25 663 aa13.19□□□□□ -0.3
UBE4B-210ENST00000488228 PCNTO95613 3336 aa13.19□□□□□ -0.3
UBE4B-210ENST00000488228 WDR33Q9C0J8 1336 aaKnown RBP13.18□□□□□ -0.3
UBE4B-210ENST00000488228 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
UBE4B-210ENST00000488228 HAND2P61296 217 aa13.18□□□□□ -0.3
UBE4B-210ENST00000488228 PPARAQ07869 468 aa13.18□□□□□ -0.3
UBE4B-210ENST00000488228 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
UBE4B-210ENST00000488228 C16orf86Q6ZW13 317 aa13.18□□□□□ -0.3
UBE4B-210ENST00000488228 DNAJC5GQ8N7S2 189 aa13.18□□□□□ -0.3
UBE4B-210ENST00000488228 SLC10A4Q96EP9 437 aa13.18□□□□□ -0.3
UBE4B-210ENST00000488228 ESYT1Q9BSJ8 1104 aa13.18□□□□□ -0.3
UBE4B-210ENST00000488228 ZBTB21Q9ULJ3 1066 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms