RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 RESP18Q5W5W9 173 aa16.19■□□□□ 0.18
COL16A1-214ENST00000488128 HDXQ7Z353 690 aa16.19■□□□□ 0.18
COL16A1-214ENST00000488128 PACS2Q86VP3 889 aa16.19■□□□□ 0.18
COL16A1-214ENST00000488128 SLC35F6Q8N357 371 aa16.19■□□□□ 0.18
COL16A1-214ENST00000488128 NOA1Q8NC60 698 aaKnown RBP16.19■□□□□ 0.18
COL16A1-214ENST00000488128 PLBD2Q8NHP8 589 aa16.19■□□□□ 0.18
COL16A1-214ENST00000488128 NCOA7Q8NI08 942 aa16.19■□□□□ 0.18
COL16A1-214ENST00000488128 RIN2Q8WYP3 895 aaPredicted RBP16.19■□□□□ 0.18
COL16A1-214ENST00000488128 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
COL16A1-214ENST00000488128 KIF5CO60282 957 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 ZMYND10O75800 440 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 CDC25AP30304 524 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 AFMP43652 599 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 TTC39AQ5SRH9 613 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 NCAPH2Q6IBW4 605 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 NFXL1Q6ZNB6 911 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 BTBD18B2RXH4 712 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 IRX3P78415 501 aaPredicted RBP16.18■□□□□ 0.18
COL16A1-214ENST00000488128 POSTNQ15063 836 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 CYB5R4Q7L1T6 521 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 IGSF22Q8N9C0 903 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 STAMQ92783 540 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 MAP3K14Q99558 947 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 ADGRG1Q9Y653 693 aa16.18■□□□□ 0.18
COL16A1-214ENST00000488128 GOLGA6L9A6NEM1 432 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 B4E1Z4 1266 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 AKR1B15C9JRZ8 316 aaPredicted RBP16.17■□□□□ 0.18
COL16A1-214ENST00000488128 CASP8Q14790 479 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 BRD3Q15059 726 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 RABL6Q3YEC7 729 aaPredicted RBP16.17■□□□□ 0.18
COL16A1-214ENST00000488128 STRN4Q9NRL3 753 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 TFR2Q9UP52 801 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 ALS2Q96Q42 1657 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 TNS3Q68CZ2 1445 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 LRRIQ3A6PVS8 624 aaPredicted RBP16.17■□□□□ 0.18
COL16A1-214ENST00000488128 AKAP17AQ02040 695 aaKnown RBP16.17■□□□□ 0.18
COL16A1-214ENST00000488128 SLC26A6Q9BXS9 759 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 CDC23Q9UJX2 597 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 L1RE1Q9UN81 338 aa16.17■□□□□ 0.18
COL16A1-214ENST00000488128 EIF3CLB5ME19 914 aaKnown RBP16.16■□□□□ 0.18
COL16A1-214ENST00000488128 CASP14P31944 242 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 GUCY1A2P33402 732 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 CCT6AP40227 531 aaKnown RBP16.16■□□□□ 0.18
COL16A1-214ENST00000488128 ZAP70P43403 619 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 GTF2A1P52655 376 aaPredicted RBP16.16■□□□□ 0.18
COL16A1-214ENST00000488128 CASP7P55210 303 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 HSP90B2PQ58FF3 399 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 ZCRB1Q8TBF4 217 aaKnown RBP16.16■□□□□ 0.18
COL16A1-214ENST00000488128 DRC1Q96MC2 740 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 EIF3CQ99613 913 aaKnown RBP16.16■□□□□ 0.18
COL16A1-214ENST00000488128 FAM204AQ9H8W3 233 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 ENC1O14682 589 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 FOXO4P98177 505 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 PPFIBP1Q86W92 1011 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 KIF1AQ12756 1690 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 ADAMTS7Q9UKP4 1686 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 GPAA1O43292 621 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 TRDNQ13061 729 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 SART3Q15020 963 aaKnown RBP16.16■□□□□ 0.18
COL16A1-214ENST00000488128 E2F4Q16254 413 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 TRIM10Q9UDY6 481 aa16.16■□□□□ 0.18
COL16A1-214ENST00000488128 ZNF18P17022 549 aa16.15■□□□□ 0.18
COL16A1-214ENST00000488128 TRIM29Q14134 588 aa16.15■□□□□ 0.18
COL16A1-214ENST00000488128 RANBP6O60518 1105 aaKnown RBP16.15■□□□□ 0.18
COL16A1-214ENST00000488128 PPP6R2O75170 966 aa16.15■□□□□ 0.18
COL16A1-214ENST00000488128 IARSP41252 1262 aaKnown RBP16.15■□□□□ 0.18
COL16A1-214ENST00000488128 MDM2Q00987 491 aaPredicted RBP16.15■□□□□ 0.18
COL16A1-214ENST00000488128 NR5A1Q13285 461 aa16.15■□□□□ 0.18
COL16A1-214ENST00000488128 LRRC31Q6UY01 552 aa16.15■□□□□ 0.18
COL16A1-214ENST00000488128 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.15■□□□□ 0.18
COL16A1-214ENST00000488128 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
COL16A1-214ENST00000488128 TBC1D10CQ8IV04 446 aa16.15■□□□□ 0.18
COL16A1-214ENST00000488128 CTAGE9A4FU28 777 aa16.14■□□□□ 0.17
COL16A1-214ENST00000488128 FXR1P51114 621 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL16A1-214ENST00000488128 NR1I3Q14994 352 aa16.14■□□□□ 0.17
COL16A1-214ENST00000488128 GSPT2Q8IYD1 628 aaKnown RBP16.14■□□□□ 0.17
COL16A1-214ENST00000488128 KRI1Q8N9T8 703 aaKnown RBP16.14■□□□□ 0.17
COL16A1-214ENST00000488128 ZKSCAN3Q9BRR0 538 aa16.14■□□□□ 0.17
COL16A1-214ENST00000488128 SCN11AQ9UI33 1791 aa16.14■□□□□ 0.17
COL16A1-214ENST00000488128 NUTM2AQ8IVF1 878 aaPredicted RBP16.14■□□□□ 0.17
COL16A1-214ENST00000488128 NBPF3Q9H094 633 aa16.14■□□□□ 0.17
COL16A1-214ENST00000488128 CWC25Q9NXE8 425 aaPredicted RBP16.14■□□□□ 0.17
COL16A1-214ENST00000488128 HDAC6Q9UBN7 1215 aa16.14■□□□□ 0.17
COL16A1-214ENST00000488128 ANGEL1Q9UNK9 670 aaKnown RBP16.14■□□□□ 0.17
COL16A1-214ENST00000488128 RNF225M0QZC1 329 aaPredicted RBP16.13■□□□□ 0.17
COL16A1-214ENST00000488128 ERLIN1O75477 346 aa16.13■□□□□ 0.17
COL16A1-214ENST00000488128 EIF3JO75822 258 aaKnown RBP16.13■□□□□ 0.17
COL16A1-214ENST00000488128 APOA5Q6Q788 366 aa16.13■□□□□ 0.17
COL16A1-214ENST00000488128 SLF1Q9BQI6 1058 aa16.13■□□□□ 0.17
COL16A1-214ENST00000488128 PSD3Q9NYI0 1048 aa16.13■□□□□ 0.17
COL16A1-214ENST00000488128 PCDHB6Q9Y5E3 794 aa16.13■□□□□ 0.17
COL16A1-214ENST00000488128 H7C1W4 665 aa16.13■□□□□ 0.17
COL16A1-214ENST00000488128 SRGAP2O75044 1071 aa16.13■□□□□ 0.17
COL16A1-214ENST00000488128 TTC31Q49AM3 519 aaPredicted RBP16.13■□□□□ 0.17
COL16A1-214ENST00000488128 CEP112Q8N8E3 955 aa16.13■□□□□ 0.17
COL16A1-214ENST00000488128 CTAGE15A4D2H0 777 aa16.12■□□□□ 0.17
COL16A1-214ENST00000488128 CTAGE8P0CG41 777 aa16.12■□□□□ 0.17
COL16A1-214ENST00000488128 CD44P16070 742 aaKnown RBP16.12■□□□□ 0.17
COL16A1-214ENST00000488128 TOB1P50616 345 aaPredicted RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms