RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 COL6A1P12109 1028 aa18.99■□□□□ 0.63
NME1-208ENST00000487481 PRKAR2AP13861 404 aaKnown RBP18.99■□□□□ 0.63
NME1-208ENST00000487481 CCDC184Q52MB2 194 aa18.99■□□□□ 0.63
NME1-208ENST00000487481 DDX4Q9NQI0 724 aaKnown RBP18.99■□□□□ 0.63
NME1-208ENST00000487481 ZBTB22O15209 634 aa18.98■□□□□ 0.63
NME1-208ENST00000487481 RFX5P48382 616 aaPredicted RBP18.98■□□□□ 0.63
NME1-208ENST00000487481 SPP2Q13103 211 aa18.98■□□□□ 0.63
NME1-208ENST00000487481 PICALMQ13492 652 aa18.98■□□□□ 0.63
NME1-208ENST00000487481 ATP2B3Q16720 1220 aa18.98■□□□□ 0.63
NME1-208ENST00000487481 DZIP1Q86YF9 867 aaKnown RBP18.98■□□□□ 0.63
NME1-208ENST00000487481 SLF2Q8IX21 1173 aa18.98■□□□□ 0.63
NME1-208ENST00000487481 ZNF280CQ8ND82 737 aa18.98■□□□□ 0.63
NME1-208ENST00000487481 SOCS4Q8WXH5 440 aa18.98■□□□□ 0.63
NME1-208ENST00000487481 OSBPL5Q9H0X9 879 aaPredicted RBP18.98■□□□□ 0.63
NME1-208ENST00000487481 ASCC2Q9H1I8 757 aaPredicted RBP18.98■□□□□ 0.63
NME1-208ENST00000487481 MORF4L1Q9UBU8 362 aa18.98■□□□□ 0.63
NME1-208ENST00000487481 DNAH12Q6ZR08 3092 aa18.98■□□□□ 0.63
NME1-208ENST00000487481 XRCC5P13010 732 aaKnown RBP18.97■□□□□ 0.63
NME1-208ENST00000487481 HMGCS2P54868 508 aa18.97■□□□□ 0.63
NME1-208ENST00000487481 MDM2Q00987 491 aaPredicted RBP18.97■□□□□ 0.63
NME1-208ENST00000487481 ATG9AQ7Z3C6 839 aa18.97■□□□□ 0.63
NME1-208ENST00000487481 FAM163AQ96GL9 167 aaPredicted RBP18.97■□□□□ 0.63
NME1-208ENST00000487481 SALL2Q9Y467 1007 aaPredicted RBP18.97■□□□□ 0.63
NME1-208ENST00000487481 PRUNE2Q8WUY3 3088 aa18.97■□□□□ 0.63
NME1-208ENST00000487481 MAST2Q6P0Q8 1798 aa18.96■□□□□ 0.63
NME1-208ENST00000487481 CYP2B6P20813 491 aa18.96■□□□□ 0.63
NME1-208ENST00000487481 PHKA1P46020 1223 aa18.96■□□□□ 0.63
NME1-208ENST00000487481 LRRC26Q2I0M4 334 aa18.96■□□□□ 0.63
NME1-208ENST00000487481 TRMT44Q8IYL2 757 aaKnown RBP18.96■□□□□ 0.63
NME1-208ENST00000487481 NUDT12Q9BQG2 462 aa18.96■□□□□ 0.63
NME1-208ENST00000487481 FBXO3Q9UK99 471 aa18.96■□□□□ 0.63
NME1-208ENST00000487481 FRMPD3Q5JV73 1810 aa18.95■□□□□ 0.62
NME1-208ENST00000487481 NPM3O75607 178 aaKnown RBP18.95■□□□□ 0.62
NME1-208ENST00000487481 BTDP43251 543 aa18.95■□□□□ 0.62
NME1-208ENST00000487481 SH3D19Q5HYK7 790 aa18.95■□□□□ 0.62
NME1-208ENST00000487481 USP44Q9H0E7 712 aa18.95■□□□□ 0.62
NME1-208ENST00000487481 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.95■□□□□ 0.62
NME1-208ENST00000487481 CIAO1O76071 339 aa18.94■□□□□ 0.62
NME1-208ENST00000487481 ZKSCAN1P17029 563 aaPredicted RBP18.94■□□□□ 0.62
NME1-208ENST00000487481 ZNF697Q5TEC3 545 aa18.94■□□□□ 0.62
NME1-208ENST00000487481 CEP126Q9P2H0 1117 aa18.94■□□□□ 0.62
NME1-208ENST00000487481 MROH7-TTC4A0A0A0MT08 1334 aa18.94■□□□□ 0.62
NME1-208ENST00000487481 PDS5AQ29RF7 1337 aaKnown RBP18.94■□□□□ 0.62
NME1-208ENST00000487481 FAM196BA6NMK8 535 aa18.93■□□□□ 0.62
NME1-208ENST00000487481 USP17L5A8MUK1 530 aa18.93■□□□□ 0.62
NME1-208ENST00000487481 IRX3P78415 501 aaPredicted RBP18.93■□□□□ 0.62
NME1-208ENST00000487481 PDE3AQ14432 1141 aa18.93■□□□□ 0.62
NME1-208ENST00000487481 FAM161BQ96MY7 647 aa18.93■□□□□ 0.62
NME1-208ENST00000487481 LBHD1Q9BQE6 289 aaPredicted RBP18.93■□□□□ 0.62
NME1-208ENST00000487481 PTPRCP08575 1304 aa18.93■□□□□ 0.62
NME1-208ENST00000487481 TTC28Q96AY4 2481 aa18.93■□□□□ 0.62
NME1-208ENST00000487481 CDH23Q9H251 3354 aa18.92■□□□□ 0.62
NME1-208ENST00000487481 CAP2P40123 477 aa18.92■□□□□ 0.62
NME1-208ENST00000487481 RHBDL3P58872 404 aa18.92■□□□□ 0.62
NME1-208ENST00000487481 CACNB2Q08289 660 aaPredicted RBP18.92■□□□□ 0.62
NME1-208ENST00000487481 SPTY2D1Q68D10 685 aaPredicted RBP18.92■□□□□ 0.62
NME1-208ENST00000487481 LHX8Q68G74 356 aa18.92■□□□□ 0.62
NME1-208ENST00000487481 AS3MTQ9HBK9 375 aa18.92■□□□□ 0.62
NME1-208ENST00000487481 PRDM6Q9NQX0 595 aa18.92■□□□□ 0.62
NME1-208ENST00000487481 ABCF2Q9UG63 623 aa18.92■□□□□ 0.62
NME1-208ENST00000487481 GPR75-ASB3A0A0A6YYF3 556 aa18.91■□□□□ 0.62
NME1-208ENST00000487481 MAPK4P31152 587 aa18.91■□□□□ 0.62
NME1-208ENST00000487481 RASGRF1Q13972 1273 aa18.91■□□□□ 0.62
NME1-208ENST00000487481 CCDC102BQ68D86 513 aa18.91■□□□□ 0.62
NME1-208ENST00000487481 GPRC5AQ8NFJ5 357 aa18.91■□□□□ 0.62
NME1-208ENST00000487481 SIL1Q9H173 461 aa18.91■□□□□ 0.62
NME1-208ENST00000487481 MAP4K4O95819 1239 aaPredicted RBP18.9■□□□□ 0.62
NME1-208ENST00000487481 CCND3P30281 292 aaPredicted RBP18.9■□□□□ 0.62
NME1-208ENST00000487481 HOXA7P31268 230 aaPredicted RBP18.9■□□□□ 0.62
NME1-208ENST00000487481 RGS2P41220 211 aa18.9■□□□□ 0.62
NME1-208ENST00000487481 USP6NLQ92738 828 aa18.9■□□□□ 0.62
NME1-208ENST00000487481 LTBP2Q14767 1821 aa18.9■□□□□ 0.62
NME1-208ENST00000487481 HERVK_113P62684 666 aa18.89■□□□□ 0.61
NME1-208ENST00000487481 MTMR2Q13614 643 aa18.89■□□□□ 0.61
NME1-208ENST00000487481 MRPL50Q8N5N7 158 aaKnown RBP18.89■□□□□ 0.61
NME1-208ENST00000487481 MAFAQ8NHW3 353 aaPredicted RBP18.89■□□□□ 0.61
NME1-208ENST00000487481 APBA2Q99767 749 aa18.89■□□□□ 0.61
NME1-208ENST00000487481 WDR18Q9BV38 432 aa18.89■□□□□ 0.61
NME1-208ENST00000487481 TXNRD2Q9NNW7 524 aa18.89■□□□□ 0.61
NME1-208ENST00000487481 TMOD4Q9NZQ9 345 aa18.89■□□□□ 0.61
NME1-208ENST00000487481 HERC5Q9UII4 1024 aaKnown RBP18.89■□□□□ 0.61
NME1-208ENST00000487481 ADORA1P30542 326 aa18.88■□□□□ 0.61
NME1-208ENST00000487481 IL15P40933 162 aaPredicted RBP18.88■□□□□ 0.61
NME1-208ENST00000487481 BACE1P56817 501 aa18.88■□□□□ 0.61
NME1-208ENST00000487481 MECOMQ03112 1051 aa18.88■□□□□ 0.61
NME1-208ENST00000487481 RRP1BQ14684 758 aaKnown RBP18.88■□□□□ 0.61
NME1-208ENST00000487481 GTF3C2Q8WUA4 911 aaPredicted RBP18.88■□□□□ 0.61
NME1-208ENST00000487481 P2RX7Q99572 595 aaKnown RBP18.88■□□□□ 0.61
NME1-208ENST00000487481 CDX2Q99626 313 aaPredicted RBP18.88■□□□□ 0.61
NME1-208ENST00000487481 MUC3AQ02505 3323 aa18.88■□□□□ 0.61
NME1-208ENST00000487481 ERVK-9P63128 1117 aa18.87■□□□□ 0.61
NME1-208ENST00000487481 ERVK-24P63145 666 aa18.87■□□□□ 0.61
NME1-208ENST00000487481 CCL14Q16627 93 aa18.87■□□□□ 0.61
NME1-208ENST00000487481 MORN1Q5T089 497 aa18.87■□□□□ 0.61
NME1-208ENST00000487481 ERICH6Q7L0X2 663 aa18.87■□□□□ 0.61
NME1-208ENST00000487481 GPR142Q7Z601 462 aa18.87■□□□□ 0.61
NME1-208ENST00000487481 CCAR1Q8IX12 1150 aaKnown RBP18.87■□□□□ 0.61
NME1-208ENST00000487481 PRKAG2Q9UGJ0 569 aa18.87■□□□□ 0.61
NME1-208ENST00000487481 ASNSP08243 561 aa18.86■□□□□ 0.61
NME1-208ENST00000487481 ZNF384Q8TF68 577 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms