RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 MAP3K9P80192 1104 aa14.04□□□□□ -0.16
CLIP2-207ENST00000487447 NOGQ13253 232 aa14.04□□□□□ -0.16
CLIP2-207ENST00000487447 TTC22Q5TAA0 569 aa14.04□□□□□ -0.16
CLIP2-207ENST00000487447 ZSCAN29Q8IWY8 852 aaPredicted RBP14.04□□□□□ -0.16
CLIP2-207ENST00000487447 CLMNQ96JQ2 1002 aa14.04□□□□□ -0.16
CLIP2-207ENST00000487447 DCP1AQ9NPI6 582 aaPredicted RBP14.04□□□□□ -0.16
CLIP2-207ENST00000487447 PI4KBQ9UBF8 816 aa14.04□□□□□ -0.16
CLIP2-207ENST00000487447 SNCAIPQ9Y6H5 919 aa14.04□□□□□ -0.16
CLIP2-207ENST00000487447 M0R2C6 588 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 ZBTB48P10074 688 aaPredicted RBP14.03□□□□□ -0.16
CLIP2-207ENST00000487447 USP5P45974 858 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 VGLL4Q14135 290 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 GIMAP6Q6P9H5 292 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 MIGA2Q7L4E1 593 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 FOXP4Q8IVH2 680 aaPredicted RBP14.03□□□□□ -0.16
CLIP2-207ENST00000487447 SDR42E1Q8WUS8 393 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 CCDC136Q96JN2 1154 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 WRNIP1Q96S55 665 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 DNAJC18Q9H819 358 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 PTPRFP10586 1907 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 MYH8P13535 1937 aa14.03□□□□□ -0.16
CLIP2-207ENST00000487447 SPDYE5A6NIY4 337 aa14.02□□□□□ -0.17
CLIP2-207ENST00000487447 GPAA1O43292 621 aa14.02□□□□□ -0.17
CLIP2-207ENST00000487447 CA12O43570 354 aa14.02□□□□□ -0.17
CLIP2-207ENST00000487447 GNAT2P19087 354 aa14.02□□□□□ -0.17
CLIP2-207ENST00000487447 GABPAQ06546 454 aa14.02□□□□□ -0.17
CLIP2-207ENST00000487447 SPRYD7Q5W111 196 aa14.02□□□□□ -0.17
CLIP2-207ENST00000487447 WNK4Q96J92 1243 aa14.02□□□□□ -0.17
CLIP2-207ENST00000487447 HELLSQ9NRZ9 838 aa14.02□□□□□ -0.17
CLIP2-207ENST00000487447 PPP4R2Q9NY27 417 aa14.02□□□□□ -0.17
CLIP2-207ENST00000487447 PALD1Q9ULE6 856 aa14.02□□□□□ -0.17
CLIP2-207ENST00000487447 LAMA4Q16363 1823 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 ROBO3Q96MS0 1386 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 GSG1L2A8MUP6 293 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 PRKAB2O43741 272 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 HLA-DOAP06340 250 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 SLURP2P0DP57 97 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 SDSP20132 328 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 INPP5BP32019 993 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 GJA5P36382 358 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 TTC6Q86TZ1 520 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 REM2Q8IYK8 340 aaPredicted RBP14.01□□□□□ -0.17
CLIP2-207ENST00000487447 SEC62Q99442 399 aaKnown RBP14.01□□□□□ -0.17
CLIP2-207ENST00000487447 MCOLN1Q9GZU1 580 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 CSADQ9Y600 493 aa14.01□□□□□ -0.17
CLIP2-207ENST00000487447 GREB1LQ9C091 1923 aaPredicted RBP14.01□□□□□ -0.17
CLIP2-207ENST00000487447 A0A0D9SFI3 127 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 TRIM6-TRIM34B2RNG4 842 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 FOXP2O15409 715 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 CTNND1O60716 968 aaKnown RBP14□□□□□ -0.17
CLIP2-207ENST00000487447 KIF23Q02241 960 aaPredicted RBP14□□□□□ -0.17
CLIP2-207ENST00000487447 SBK1Q52WX2 424 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 TATDN1Q6P1N9 297 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 ERO1BQ86YB8 467 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 SCYL3Q8IZE3 742 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 ZKSCAN4Q969J2 545 aaPredicted RBP14□□□□□ -0.17
CLIP2-207ENST00000487447 SLC10A4Q96EP9 437 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 EPB41L4AQ9HCS5 686 aaPredicted RBP14□□□□□ -0.17
CLIP2-207ENST00000487447 SAP30BPQ9UHR5 308 aaKnown RBP14□□□□□ -0.17
CLIP2-207ENST00000487447 SERPINB13Q9UIV8 391 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 SLC4A4Q9Y6R1 1079 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 LOC285556D6RIA3 1793 aa14□□□□□ -0.17
CLIP2-207ENST00000487447 TESPA1A2RU30 521 aaPredicted RBP13.99□□□□□ -0.17
CLIP2-207ENST00000487447 FAM196BA6NMK8 535 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 HIP1O00291 1037 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 PLCD1P51178 756 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 PPATQ06203 517 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 DGKZQ13574 1117 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 RRP1BQ14684 758 aaKnown RBP13.99□□□□□ -0.17
CLIP2-207ENST00000487447 C12orf60Q5U649 245 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 RILPL2Q969X0 211 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 OPTNQ96CV9 577 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 FAM227BQ96M60 508 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 ELP3Q9H9T3 547 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.99□□□□□ -0.17
CLIP2-207ENST00000487447 GINM1Q9NU53 330 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 MCM9Q9NXL9 1143 aa13.99□□□□□ -0.17
CLIP2-207ENST00000487447 ARPP21Q9UBL0 812 aaPredicted RBP13.99□□□□□ -0.17
CLIP2-207ENST00000487447 ZMYM6O95789 1325 aa13.98□□□□□ -0.17
CLIP2-207ENST00000487447 PATL2C9JE40 543 aaKnown RBP13.98□□□□□ -0.17
CLIP2-207ENST00000487447 CAP2P40123 477 aa13.98□□□□□ -0.17
CLIP2-207ENST00000487447 TM4SF4P48230 202 aa13.98□□□□□ -0.17
CLIP2-207ENST00000487447 EVX2Q03828 476 aa13.98□□□□□ -0.17
CLIP2-207ENST00000487447 NMIQ13287 307 aaPredicted RBP13.98□□□□□ -0.17
CLIP2-207ENST00000487447 PPIL2Q13356 520 aa13.98□□□□□ -0.17
CLIP2-207ENST00000487447 MCMDC2Q4G0Z9 681 aa13.98□□□□□ -0.17
CLIP2-207ENST00000487447 CASP8AP2Q9UKL3 1982 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 MANSC4A6NHS7 340 aaPredicted RBP13.97□□□□□ -0.17
CLIP2-207ENST00000487447 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 USP17L21D6R901 530 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 TRPA1O75762 1119 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 SHMT1P34896 483 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 INHBEP58166 350 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 MLLT1Q03111 559 aaPredicted RBP13.97□□□□□ -0.17
CLIP2-207ENST00000487447 CTR9Q6PD62 1173 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 IFNL3Q8IZI9 196 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 DDRGK1Q96HY6 314 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 MS4A4AQ96JQ5 239 aa13.97□□□□□ -0.17
CLIP2-207ENST00000487447 KCNH4Q9UQ05 1017 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms