RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 NEUROD2Q15784 382 aa14.88□□□□□ -0.03
TRIM56-204ENST00000487252 CCL14Q16627 93 aa14.88□□□□□ -0.03
TRIM56-204ENST00000487252 CDC42EP5Q6NZY7 148 aa14.88□□□□□ -0.03
TRIM56-204ENST00000487252 LDHAL6AQ6ZMR3 332 aa14.88□□□□□ -0.03
TRIM56-204ENST00000487252 ZFPM1Q8IX07 1006 aa14.88□□□□□ -0.03
TRIM56-204ENST00000487252 LPAR1Q92633 364 aa14.88□□□□□ -0.03
TRIM56-204ENST00000487252 TIFAQ96CG3 184 aa14.88□□□□□ -0.03
TRIM56-204ENST00000487252 ATP11BQ9Y2G3 1177 aa14.88□□□□□ -0.03
TRIM56-204ENST00000487252 ELL2O00472 640 aaPredicted RBP14.87□□□□□ -0.03
TRIM56-204ENST00000487252 ADGRE1Q14246 886 aa14.87□□□□□ -0.03
TRIM56-204ENST00000487252 MORN1Q5T089 497 aa14.87□□□□□ -0.03
TRIM56-204ENST00000487252 CCDC30Q5VVM6 783 aa14.87□□□□□ -0.03
TRIM56-204ENST00000487252 SLC39A5Q6ZMH5 540 aa14.87□□□□□ -0.03
TRIM56-204ENST00000487252 SH3RF1Q7Z6J0 888 aa14.87□□□□□ -0.03
TRIM56-204ENST00000487252 ASCC2Q9H1I8 757 aaPredicted RBP14.87□□□□□ -0.03
TRIM56-204ENST00000487252 ITGB8P26012 769 aa14.86□□□□□ -0.03
TRIM56-204ENST00000487252 CHAF1AQ13111 956 aaPredicted RBP14.86□□□□□ -0.03
TRIM56-204ENST00000487252 C1orf53Q5VUE5 145 aa14.86□□□□□ -0.03
TRIM56-204ENST00000487252 C8orf58Q8NAV2 365 aa14.86□□□□□ -0.03
TRIM56-204ENST00000487252 ZNF594Q96JF6 807 aaPredicted RBP14.86□□□□□ -0.03
TRIM56-204ENST00000487252 PRDM5Q9NQX1 630 aaPredicted RBP14.86□□□□□ -0.03
TRIM56-204ENST00000487252 DDX20Q9UHI6 824 aaKnown RBP14.86□□□□□ -0.03
TRIM56-204ENST00000487252 IQSEC3Q9UPP2 1182 aaPredicted RBP14.86□□□□□ -0.03
TRIM56-204ENST00000487252 MSCO60682 206 aa14.85□□□□□ -0.03
TRIM56-204ENST00000487252 CHMP4AQ9BY43 222 aa14.85□□□□□ -0.03
TRIM56-204ENST00000487252 PRDM12Q9H4Q4 367 aa14.85□□□□□ -0.03
TRIM56-204ENST00000487252 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.85□□□□□ -0.03
TRIM56-204ENST00000487252 RGS2P41220 211 aa14.84□□□□□ -0.03
TRIM56-204ENST00000487252 PABPC4Q13310 644 aaKnown RBP eCLIP14.84□□□□□ -0.03
TRIM56-204ENST00000487252 TRIM60Q495X7 471 aa14.84□□□□□ -0.03
TRIM56-204ENST00000487252 SH3BP5LQ7L8J4 393 aa14.84□□□□□ -0.03
TRIM56-204ENST00000487252 CCDC84Q86UT8 332 aaPredicted RBP14.84□□□□□ -0.03
TRIM56-204ENST00000487252 APBA2Q99767 749 aa14.84□□□□□ -0.03
TRIM56-204ENST00000487252 TXNRD2Q9NNW7 524 aa14.84□□□□□ -0.03
TRIM56-204ENST00000487252 CNNM1Q9NRU3 951 aa14.84□□□□□ -0.03
TRIM56-204ENST00000487252 WDFY4Q6ZS81 3184 aa14.83□□□□□ -0.03
TRIM56-204ENST00000487252 PLXNA1Q9UIW2 1896 aa14.83□□□□□ -0.04
TRIM56-204ENST00000487252 IGHA2P01877 340 aa14.83□□□□□ -0.04
TRIM56-204ENST00000487252 MAPK4P31152 587 aa14.83□□□□□ -0.04
TRIM56-204ENST00000487252 CCDC85BQ15834 202 aaPredicted RBP14.83□□□□□ -0.04
TRIM56-204ENST00000487252 MYH16Q9H6N6 1097 aa14.83□□□□□ -0.04
TRIM56-204ENST00000487252 TRANK1O15050 2925 aa14.83□□□□□ -0.04
TRIM56-204ENST00000487252 UTYO14607 1347 aa14.83□□□□□ -0.04
TRIM56-204ENST00000487252 RFX7Q2KHR2 1363 aa14.83□□□□□ -0.04
TRIM56-204ENST00000487252 SLURP2P0DP57 97 aa14.82□□□□□ -0.04
TRIM56-204ENST00000487252 TFF2Q03403 129 aa14.82□□□□□ -0.04
TRIM56-204ENST00000487252 SH3D19Q5HYK7 790 aa14.82□□□□□ -0.04
TRIM56-204ENST00000487252 LMBR1LQ6UX01 489 aa14.82□□□□□ -0.04
TRIM56-204ENST00000487252 LINS1Q8NG48 757 aa14.82□□□□□ -0.04
TRIM56-204ENST00000487252 KHSRPQ92945 711 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRIM56-204ENST00000487252 IDI2Q9BXS1 227 aa14.82□□□□□ -0.04
TRIM56-204ENST00000487252 IFT57Q9NWB7 429 aa14.82□□□□□ -0.04
TRIM56-204ENST00000487252 LRRFIP2Q9Y608 721 aaKnown RBP14.82□□□□□ -0.04
TRIM56-204ENST00000487252 PEX10O60683 326 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 ENTPD3O75355 529 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 KCNQ1P51787 676 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 SPP2Q13103 211 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 AAK1Q2M2I8 961 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 CCDC57Q2TAC2 916 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 EPHA10Q5JZY3 1008 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 G2E3Q7L622 706 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 GPR142Q7Z601 462 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 VPS37DQ86XT2 251 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 GPRC5AQ8NFJ5 357 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 PBX4Q9BYU1 374 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 FLRT1Q9NZU1 646 aa14.81□□□□□ -0.04
TRIM56-204ENST00000487252 KIAA0355O15063 1070 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 HOXA7P31268 230 aaPredicted RBP14.8□□□□□ -0.04
TRIM56-204ENST00000487252 PBX2P40425 430 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 HMGCS2P54868 508 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 GJC2Q5T442 439 aaPredicted RBP14.8□□□□□ -0.04
TRIM56-204ENST00000487252 RASIP1Q5U651 963 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 CCDC146Q8IYE0 955 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 ZNF280CQ8ND82 737 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 TBC1D2Q9BYX2 928 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 PUS3Q9BZE2 481 aaKnown RBP14.8□□□□□ -0.04
TRIM56-204ENST00000487252 PORCNQ9H237 461 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 TSPYL2Q9H2G4 693 aaPredicted RBP14.8□□□□□ -0.04
TRIM56-204ENST00000487252 RBPJLQ9UBG7 517 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 CHMP3Q9Y3E7 222 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 TACC3Q9Y6A5 838 aa14.8□□□□□ -0.04
TRIM56-204ENST00000487252 FRAT2O75474 233 aaPredicted RBP14.79□□□□□ -0.04
TRIM56-204ENST00000487252 RGS3P49796 1198 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 TLE2Q04725 743 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 MAP2K5Q13163 448 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 DIXDC1Q155Q3 683 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 Q3C1V9 767 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 CAVIN4Q5BKX8 364 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 TSPYL6Q8N831 410 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 ARRDC4Q8NCT1 418 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 TRPV1Q8NER1 839 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 RUNDC1Q96C34 613 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 USP40Q9NVE5 1235 aa14.79□□□□□ -0.04
TRIM56-204ENST00000487252 ATAD5Q96QE3 1844 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 MROH5Q6ZUA9 1318 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 KIF16BQ96L93 1317 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 FAM86C2PA6NEL3 165 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 DDTLA6NHG4 134 aaPredicted RBP14.78□□□□□ -0.04
TRIM56-204ENST00000487252 PI4K2BG5E9Z4 385 aa14.78□□□□□ -0.04
TRIM56-204ENST00000487252 SMIM22K7EJ46 135 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms