RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 CHMP4CQ96CF2 233 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 ZDHHC15Q96MV8 337 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 LLPHQ9BRT6 129 aaKnown RBP10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 GPHNQ9NQX3 736 aaPredicted RBP10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 ZNF277Q9NRM2 450 aaPredicted RBP10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 MCM9Q9NXL9 1143 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 RNF181Q9P0P0 153 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 ZSWIM5Q9P217 1185 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 ANGEL1Q9UNK9 670 aaKnown RBP10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 SMC3Q9UQE7 1217 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 FLT1P17948 1338 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 F8W031 263 aaPredicted RBP10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 NFKBIEO00221 500 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 BRD1O95696 1058 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 SLC3A2P08195 630 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 VIL1P09327 827 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 USP17L8P0C7I0 530 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 CRKP46108 304 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 RASSF7Q02833 373 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 SCRN1Q12765 414 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 NFKBIBQ15653 356 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 APOBEC3HQ6NTF7 200 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 LARGE2Q8N3Y3 721 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 SMARCC2Q8TAQ2 1214 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 TNPO1Q92973 898 aaKnown RBP10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 GMLQ99445 158 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 TAOK3Q9H2K8 898 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 LY9Q9HBG7 655 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 SERPINA10Q9UK55 444 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 BRPF3Q9ULD4 1205 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 ZDHHC9Q9Y397 364 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 NID2Q14112 1375 aa10.11□□□□□ -0.79
NUDCD3-209ENST00000487118 KLF18A0A0U1RQI7 1052 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 IFIT3O14879 490 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 WDHD1O75717 1129 aaPredicted RBP10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 PDIA4P13667 645 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 GJB2P29033 226 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 SCNN1DP51172 638 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 EVX2Q03828 476 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 STK3Q13188 491 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 PKP1Q13835 747 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 SEC23AQ15436 765 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 TMEM67Q5HYA8 995 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 PRPF38BQ5VTL8 546 aaKnown RBP10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 CDC42EP5Q6NZY7 148 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 RSBN1LQ6PCB5 846 aaPredicted RBP10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 KIAA0825Q8IV33 1275 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 MAPKAPK5Q8IW41 473 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 AMOTL1Q8IY63 956 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 NIM1KQ8IY84 436 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 ZNRF3Q9ULT6 936 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 HPS5Q9UPZ3 1129 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 ECM29Q5VYK3 1845 aa10.1□□□□□ -0.79
NUDCD3-209ENST00000487118 GOLGA8BA8MQT2 603 aa10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 NPM3O75607 178 aaKnown RBP10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 CTDNEP1O95476 244 aa10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 RCAN1P53805 252 aa10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 PDE4BQ07343 736 aa10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 SART3Q15020 963 aaKnown RBP10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 APOA5Q6Q788 366 aa10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 TMTC2Q8N394 836 aa10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 NSUN7Q8NE18 718 aaKnown RBP10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 SENP2Q9HC62 589 aa10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 TOMM22Q9NS69 142 aa10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 USP40Q9NVE5 1235 aa10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 DICER1Q9UPY3 1922 aaKnown RBP10.09□□□□□ -0.79
NUDCD3-209ENST00000487118 WDR33Q9C0J8 1336 aaKnown RBP10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 MYH1P12882 1939 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 PSMD14O00487 310 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 JAK2O60674 1132 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 RAD17O75943 681 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 POLR3DP05423 398 aaPredicted RBP10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 HSPA8P11142 646 aaKnown RBP10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 SYT1P21579 422 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 MCM4P33991 863 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 PLCD1P51178 756 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 HMGN5P82970 282 aaKnown RBP10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 WTAPQ15007 396 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 C16orf86Q6ZW13 317 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 STK11IPQ8N1F8 1099 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 AGBL3Q8NEM8 1001 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 GBP4Q96PP9 640 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 ZSCAN10Q96SZ4 725 aaPredicted RBP10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 UBAC1Q9BSL1 405 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 IDI2Q9BXS1 227 aa10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 DDX4Q9NQI0 724 aaKnown RBP10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 SAP30BPQ9UHR5 308 aaKnown RBP10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 COL2A1P02458 1487 aaPredicted RBP10.08□□□□□ -0.8
NUDCD3-209ENST00000487118 TNKSO95271 1327 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 ERICH2A1L162 156 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 PTPDC1A2A3K4 754 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 CCDC69A6NI79 296 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 POTECB2RU33 542 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 ZBTB43O43298 467 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 STX6O43752 255 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 DHX16O60231 1041 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 RANBP6O60518 1105 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 PRDM1O75626 825 aa10.07□□□□□ -0.8
NUDCD3-209ENST00000487118 PDCP20941 246 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms