RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 NUDT12Q9BQG2 462 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 AS3MTQ9HBK9 375 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 PRKAG2Q9UGJ0 569 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 RLFQ13129 1914 aa9.56□□□□□ -0.88
PDPN-205ENST00000487038 CDK5RAP2Q96SN8 1893 aa9.55□□□□□ -0.88
PDPN-205ENST00000487038 ZKSCAN1P17029 563 aaPredicted RBP9.55□□□□□ -0.88
PDPN-205ENST00000487038 MAP3K10Q02779 954 aa9.55□□□□□ -0.88
PDPN-205ENST00000487038 EXOSC9Q06265 439 aaKnown RBP9.55□□□□□ -0.88
PDPN-205ENST00000487038 TRIM32Q13049 653 aa9.55□□□□□ -0.88
PDPN-205ENST00000487038 DZIP1Q86YF9 867 aaKnown RBP9.55□□□□□ -0.88
PDPN-205ENST00000487038 MAFAQ8NHW3 353 aaPredicted RBP9.55□□□□□ -0.88
PDPN-205ENST00000487038 KAZALD1Q96I82 304 aa9.55□□□□□ -0.88
PDPN-205ENST00000487038 FAM161BQ96MY7 647 aa9.55□□□□□ -0.88
PDPN-205ENST00000487038 OSBPL5Q9H0X9 879 aaPredicted RBP9.55□□□□□ -0.88
PDPN-205ENST00000487038 DENND2AQ9ULE3 1009 aa9.55□□□□□ -0.88
PDPN-205ENST00000487038 TBC1D12O60347 775 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 COL6A1P12109 1028 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 XRCC5P13010 732 aaKnown RBP9.54□□□□□ -0.88
PDPN-205ENST00000487038 CYP2B6P20813 491 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 IRX3P78415 501 aaPredicted RBP9.54□□□□□ -0.88
PDPN-205ENST00000487038 PICALMQ13492 652 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 MAP3K21Q5TCX8 1036 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 WDR63Q8IWG1 891 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 ZFPM1Q8IX07 1006 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 CCAR1Q8IX12 1150 aaKnown RBP9.54□□□□□ -0.88
PDPN-205ENST00000487038 ZNF280CQ8ND82 737 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDPN-205ENST00000487038 CWC22Q9HCG8 908 aaKnown RBP9.54□□□□□ -0.88
PDPN-205ENST00000487038 MORF4L1Q9UBU8 362 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 GJD2Q9UKL4 321 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 SIPA1L1O43166 1804 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 GAKO14976 1311 aa9.54□□□□□ -0.88
PDPN-205ENST00000487038 DDTLA6NHG4 134 aaPredicted RBP9.53□□□□□ -0.88
PDPN-205ENST00000487038 EYA2O00167 538 aa9.53□□□□□ -0.88
PDPN-205ENST00000487038 MAPK4P31152 587 aa9.53□□□□□ -0.88
PDPN-205ENST00000487038 RGS2P41220 211 aa9.53□□□□□ -0.88
PDPN-205ENST00000487038 HMGCS2P54868 508 aa9.53□□□□□ -0.88
PDPN-205ENST00000487038 SPP2Q13103 211 aa9.53□□□□□ -0.88
PDPN-205ENST00000487038 LRRC26Q2I0M4 334 aa9.53□□□□□ -0.88
PDPN-205ENST00000487038 ANKRD44Q8N8A2 993 aa9.53□□□□□ -0.88
PDPN-205ENST00000487038 KLHDC4Q8TBB5 520 aa9.53□□□□□ -0.88
PDPN-205ENST00000487038 GTF3C2Q8WUA4 911 aaPredicted RBP9.53□□□□□ -0.88
PDPN-205ENST00000487038 ASCC2Q9H1I8 757 aaPredicted RBP9.53□□□□□ -0.88
PDPN-205ENST00000487038 PIEZO1Q92508 2521 aa9.53□□□□□ -0.88
PDPN-205ENST00000487038 USP17L5A8MUK1 530 aa9.52□□□□□ -0.89
PDPN-205ENST00000487038 MSCO60682 206 aa9.52□□□□□ -0.89
PDPN-205ENST00000487038 BTDP43251 543 aa9.52□□□□□ -0.89
PDPN-205ENST00000487038 ATP2B3Q16720 1220 aa9.52□□□□□ -0.89
PDPN-205ENST00000487038 SPTY2D1Q68D10 685 aaPredicted RBP9.52□□□□□ -0.89
PDPN-205ENST00000487038 SH3BP5LQ7L8J4 393 aa9.52□□□□□ -0.89
PDPN-205ENST00000487038 CCDC84Q86UT8 332 aaPredicted RBP9.52□□□□□ -0.89
PDPN-205ENST00000487038 CDX2Q99626 313 aaPredicted RBP9.52□□□□□ -0.89
PDPN-205ENST00000487038 APBA2Q99767 749 aa9.52□□□□□ -0.89
PDPN-205ENST00000487038 TMOD4Q9NZQ9 345 aa9.52□□□□□ -0.89
PDPN-205ENST00000487038 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.52□□□□□ -0.89
PDPN-205ENST00000487038 FBXO3Q9UK99 471 aa9.52□□□□□ -0.89
PDPN-205ENST00000487038 MROH7-TTC4A0A0A0MT08 1334 aa9.52□□□□□ -0.89
PDPN-205ENST00000487038 ZNF236Q9UL36 1845 aa9.52□□□□□ -0.89
PDPN-205ENST00000487038 ZBTB22O15209 634 aa9.51□□□□□ -0.89
PDPN-205ENST00000487038 NPM3O75607 178 aaKnown RBP9.51□□□□□ -0.89
PDPN-205ENST00000487038 MAP4K4O95819 1239 aaPredicted RBP9.51□□□□□ -0.89
PDPN-205ENST00000487038 FOSL2P15408 326 aa9.51□□□□□ -0.89
PDPN-205ENST00000487038 CACNB2Q08289 660 aaPredicted RBP9.51□□□□□ -0.89
PDPN-205ENST00000487038 SH3D19Q5HYK7 790 aa9.51□□□□□ -0.89
PDPN-205ENST00000487038 GPRC5AQ8NFJ5 357 aa9.51□□□□□ -0.89
PDPN-205ENST00000487038 SENP6Q9GZR1 1112 aaPredicted RBP9.51□□□□□ -0.89
PDPN-205ENST00000487038 DDX4Q9NQI0 724 aaKnown RBP9.51□□□□□ -0.89
PDPN-205ENST00000487038 ABCF2Q9UG63 623 aa9.51□□□□□ -0.89
PDPN-205ENST00000487038 PTPRCP08575 1304 aa9.51□□□□□ -0.89
PDPN-205ENST00000487038 PDS5AQ29RF7 1337 aaKnown RBP9.51□□□□□ -0.89
PDPN-205ENST00000487038 GLRX3O76003 335 aaKnown RBP9.5□□□□□ -0.89
PDPN-205ENST00000487038 CCND3P30281 292 aaPredicted RBP9.5□□□□□ -0.89
PDPN-205ENST00000487038 CAP2P40123 477 aa9.5□□□□□ -0.89
PDPN-205ENST00000487038 HERVK_113P62684 666 aa9.5□□□□□ -0.89
PDPN-205ENST00000487038 MTMR2Q13614 643 aa9.5□□□□□ -0.89
PDPN-205ENST00000487038 FAM163AQ96GL9 167 aaPredicted RBP9.5□□□□□ -0.89
PDPN-205ENST00000487038 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
PDPN-205ENST00000487038 HERC5Q9UII4 1024 aaKnown RBP9.5□□□□□ -0.89
PDPN-205ENST00000487038 MYH1P12882 1939 aa9.5□□□□□ -0.89
PDPN-205ENST00000487038 TMEM265A0A087WTH1 108 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 FAM196BA6NMK8 535 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 C19orf81C9J6K1 198 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 DNM1LO00429 736 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 CIAO1O76071 339 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 ASNSP08243 561 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 COL9A1P20849 921 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 HOXA7P31268 230 aaPredicted RBP9.49□□□□□ -0.89
PDPN-205ENST00000487038 PHKA1P46020 1223 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 BACE1P56817 501 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 ERVK-9P63128 1117 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 ERVK-24P63145 666 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 CCNA1P78396 465 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 GSTO1P78417 241 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 SMAD3P84022 425 aaKnown RBP9.49□□□□□ -0.89
PDPN-205ENST00000487038 TJAP1Q5JTD0 557 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 MFSD14CQ5VZR4 134 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 LHX8Q68G74 356 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 ERICH6Q7L0X2 663 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 GPR142Q7Z601 462 aa9.49□□□□□ -0.89
PDPN-205ENST00000487038 PLEKHH3Q7Z736 793 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms