RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PLCL1Q15111 1095 aa7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 MAP1SQ66K74 1059 aaPredicted RBP7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 ASIC4Q96FT7 647 aa7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 PIDD1Q9HB75 910 aa7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 AKAP2Q9Y2D5 859 aa7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 ABCA10Q8WWZ4 1543 aa7.06□□□□□ -1.28
SNRNP40-205ENST00000486941 RING1Q06587 406 aa7.05□□□□□ -1.28
SNRNP40-205ENST00000486941 ENOX2Q16206 610 aaKnown RBP7.05□□□□□ -1.28
SNRNP40-205ENST00000486941 CCER1Q8TC90 406 aaPredicted RBP7.05□□□□□ -1.28
SNRNP40-205ENST00000486941 NECAB3Q96P71 396 aaPredicted RBP7.05□□□□□ -1.28
SNRNP40-205ENST00000486941 OSBPL7Q9BZF2 842 aa7.05□□□□□ -1.28
SNRNP40-205ENST00000486941 PCOLCE2Q9UKZ9 415 aa7.05□□□□□ -1.28
SNRNP40-205ENST00000486941 GNEQ9Y223 722 aaKnown RBP7.05□□□□□ -1.28
SNRNP40-205ENST00000486941 CSADQ9Y600 493 aa7.05□□□□□ -1.28
SNRNP40-205ENST00000486941 PNMA6FA0A0J9YX94 578 aa7.04□□□□□ -1.28
SNRNP40-205ENST00000486941 ENC1O14682 589 aa7.04□□□□□ -1.28
SNRNP40-205ENST00000486941 NME2P22392 152 aa7.04□□□□□ -1.28
SNRNP40-205ENST00000486941 ERVK-24P63145 666 aa7.04□□□□□ -1.28
SNRNP40-205ENST00000486941 LCE1DQ5T752 114 aa7.04□□□□□ -1.28
SNRNP40-205ENST00000486941 TOP6BLQ8N6T0 577 aa7.04□□□□□ -1.28
SNRNP40-205ENST00000486941 RNF214Q8ND24 703 aa7.04□□□□□ -1.28
SNRNP40-205ENST00000486941 NLRP2Q9NX02 1062 aa7.04□□□□□ -1.28
SNRNP40-205ENST00000486941 DCTN4Q9UJW0 460 aa7.04□□□□□ -1.28
SNRNP40-205ENST00000486941 ABCA5Q8WWZ7 1642 aa7.04□□□□□ -1.28
SNRNP40-205ENST00000486941 PRKCQQ04759 706 aa7.03□□□□□ -1.28
SNRNP40-205ENST00000486941 PPP2R3AQ06190 1150 aa7.03□□□□□ -1.28
SNRNP40-205ENST00000486941 PPM1JQ5JR12 505 aa7.03□□□□□ -1.28
SNRNP40-205ENST00000486941 STK11IPQ8N1F8 1099 aa7.03□□□□□ -1.28
SNRNP40-205ENST00000486941 LRRN4CLQ8ND94 238 aa7.03□□□□□ -1.28
SNRNP40-205ENST00000486941 VAV3Q9UKW4 847 aa7.03□□□□□ -1.28
SNRNP40-205ENST00000486941 WWC3Q9ULE0 1092 aa7.03□□□□□ -1.28
SNRNP40-205ENST00000486941 CNTNAP4Q9C0A0 1308 aa7.02□□□□□ -1.28
SNRNP40-205ENST00000486941 FBXO24O75426 580 aa7.02□□□□□ -1.29
SNRNP40-205ENST00000486941 XRCC5P13010 732 aaKnown RBP7.02□□□□□ -1.29
SNRNP40-205ENST00000486941 PLCB3Q01970 1234 aa7.02□□□□□ -1.29
SNRNP40-205ENST00000486941 AOC3Q16853 763 aa7.02□□□□□ -1.29
SNRNP40-205ENST00000486941 ZNF648Q5T619 568 aaPredicted RBP7.02□□□□□ -1.29
SNRNP40-205ENST00000486941 MISP3Q96FF7 219 aa7.02□□□□□ -1.29
SNRNP40-205ENST00000486941 TNKS2Q9H2K2 1166 aa7.02□□□□□ -1.29
SNRNP40-205ENST00000486941 MKNK2Q9HBH9 465 aa7.02□□□□□ -1.29
SNRNP40-205ENST00000486941 WRNQ14191 1432 aaPredicted RBP eCLIP7.01□□□□□ -1.29
SNRNP40-205ENST00000486941 DCDC2CA8MYV0 355 aa7.01□□□□□ -1.29
SNRNP40-205ENST00000486941 CEACAM5P06731 702 aa7.01□□□□□ -1.29
SNRNP40-205ENST00000486941 PTPN11Q06124 597 aaPredicted RBP7.01□□□□□ -1.29
SNRNP40-205ENST00000486941 IFI16Q16666 785 aaKnown RBP7.01□□□□□ -1.29
SNRNP40-205ENST00000486941 TPTE2Q6XPS3 522 aa7.01□□□□□ -1.29
SNRNP40-205ENST00000486941 C12orf40Q86WS4 652 aa7.01□□□□□ -1.29
SNRNP40-205ENST00000486941 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.01□□□□□ -1.29
SNRNP40-205ENST00000486941 PRDM7Q9NQW5 492 aa7.01□□□□□ -1.29
SNRNP40-205ENST00000486941 BIN2Q9UBW5 565 aaPredicted RBP7.01□□□□□ -1.29
SNRNP40-205ENST00000486941 NKPD1Q17RQ9 610 aa7□□□□□ -1.29
SNRNP40-205ENST00000486941 RC3H2Q9HBD1 1191 aaKnown RBP7□□□□□ -1.29
SNRNP40-205ENST00000486941 GRIN2AQ12879 1464 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 TOP2BQ02880 1626 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 BIVM-ERCC5R4GMW8 1640 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 EOMESO95936 686 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 ITIH2P19823 946 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 ZNF124Q15973 351 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 ATG4DQ86TL0 474 aaPredicted RBP6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 SPACA3Q8IXA5 215 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 CBX8Q9HC52 389 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 PPP4R2Q9NY27 417 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 NUP160Q12769 1436 aa6.99□□□□□ -1.29
SNRNP40-205ENST00000486941 MAPK1P28482 360 aa6.98□□□□□ -1.29
SNRNP40-205ENST00000486941 FMR1Q06787 632 aaKnown RBP eCLIP6.98□□□□□ -1.29
SNRNP40-205ENST00000486941 INPP5AQ14642 412 aa6.98□□□□□ -1.29
SNRNP40-205ENST00000486941 FHAD1B1AJZ9 1412 aa6.98□□□□□ -1.29
SNRNP40-205ENST00000486941 ADAMTS12P58397 1594 aa6.98□□□□□ -1.29
SNRNP40-205ENST00000486941 TMEM265A0A087WTH1 108 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 CELA3AP09093 270 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 CDK8P49336 464 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 CEP170Q5SW79 1584 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 ERCC6L2Q5T890 1561 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 ZBTB37Q5TC79 503 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 PI4K2BQ8TCG2 481 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 HRASLS5Q96KN8 279 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 EMILIN2Q9BXX0 1053 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 SSU72Q9NP77 194 aaKnown RBP6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 PRDM10Q9NQV6 1147 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 SHROOM2Q13796 1616 aa6.97□□□□□ -1.29
SNRNP40-205ENST00000486941 ERICH3Q5RHP9 1530 aa6.96□□□□□ -1.29
SNRNP40-205ENST00000486941 TRIM37O94972 964 aa6.96□□□□□ -1.3
SNRNP40-205ENST00000486941 FAM168AQ92567 244 aa6.96□□□□□ -1.3
SNRNP40-205ENST00000486941 FBRSQ9HAH7 460 aa6.96□□□□□ -1.3
SNRNP40-205ENST00000486941 PRR33A8MZF0 331 aa6.95□□□□□ -1.3
SNRNP40-205ENST00000486941 IGF2BP3O00425 579 aaKnown RBP eCLIP6.95□□□□□ -1.3
SNRNP40-205ENST00000486941 BRD1O95696 1058 aa6.95□□□□□ -1.3
SNRNP40-205ENST00000486941 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.95□□□□□ -1.3
SNRNP40-205ENST00000486941 ACSBG1Q96GR2 724 aa6.95□□□□□ -1.3
SNRNP40-205ENST00000486941 SNX11Q9Y5W9 270 aa6.95□□□□□ -1.3
SNRNP40-205ENST00000486941 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.94□□□□□ -1.3
SNRNP40-205ENST00000486941 SLITRK5O94991 958 aa6.94□□□□□ -1.3
SNRNP40-205ENST00000486941 GSTT1P30711 240 aa6.94□□□□□ -1.3
SNRNP40-205ENST00000486941 MAPK8P45983 427 aa6.94□□□□□ -1.3
SNRNP40-205ENST00000486941 MESP2Q0VG99 397 aa6.94□□□□□ -1.3
SNRNP40-205ENST00000486941 LRFN4Q6PJG9 635 aa6.94□□□□□ -1.3
SNRNP40-205ENST00000486941 RIN3Q8TB24 985 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms