RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 FOXP4Q8IVH2 680 aaPredicted RBP15.88■□□□□ 0.13
SF1-216ENST00000486867 ZKSCAN4Q969J2 545 aaPredicted RBP15.88■□□□□ 0.13
SF1-216ENST00000486867 OSBP2Q969R2 916 aa15.88■□□□□ 0.13
SF1-216ENST00000486867 EVI5LQ96CN4 794 aa15.88■□□□□ 0.13
SF1-216ENST00000486867 DCP1AQ9NPI6 582 aaPredicted RBP15.88■□□□□ 0.13
SF1-216ENST00000486867 ATP8A2Q9NTI2 1148 aa15.88■□□□□ 0.13
SF1-216ENST00000486867 GREB1LQ9C091 1923 aaPredicted RBP15.88■□□□□ 0.13
SF1-216ENST00000486867 CASP8AP2Q9UKL3 1982 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 MANSC4A6NHS7 340 aaPredicted RBP15.87■□□□□ 0.13
SF1-216ENST00000486867 CTNND1O60716 968 aaKnown RBP15.87■□□□□ 0.13
SF1-216ENST00000486867 USP5P45974 858 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 INHBEP58166 350 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 ZMYM1Q5SVZ6 1142 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 OPTNQ96CV9 577 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 MS4A4AQ96JQ5 239 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 STRBPQ96SI9 672 aaKnown RBP15.87■□□□□ 0.13
SF1-216ENST00000486867 DNAJC18Q9H819 358 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 ARMT1Q9H993 441 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 ELP3Q9H9T3 547 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 SAGE1Q9NXZ1 904 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 PALD1Q9ULE6 856 aa15.87■□□□□ 0.13
SF1-216ENST00000486867 SLURP2P0DP57 97 aa15.86■□□□□ 0.13
SF1-216ENST00000486867 PPATQ06203 517 aa15.86■□□□□ 0.13
SF1-216ENST00000486867 PPIL2Q13356 520 aa15.86■□□□□ 0.13
SF1-216ENST00000486867 SCYL3Q8IZE3 742 aa15.86■□□□□ 0.13
SF1-216ENST00000486867 CFHR5Q9BXR6 569 aa15.86■□□□□ 0.13
SF1-216ENST00000486867 KCNH4Q9UQ05 1017 aa15.86■□□□□ 0.13
SF1-216ENST00000486867 FOXN1O15353 648 aa15.85■□□□□ 0.13
SF1-216ENST00000486867 CENPBP07199 599 aaPredicted RBP15.85■□□□□ 0.13
SF1-216ENST00000486867 GABPAQ06546 454 aa15.85■□□□□ 0.13
SF1-216ENST00000486867 SREBF2Q12772 1141 aa15.85■□□□□ 0.13
SF1-216ENST00000486867 GIMAP6Q6P9H5 292 aa15.85■□□□□ 0.13
SF1-216ENST00000486867 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
SF1-216ENST00000486867 AIDAQ96BJ3 306 aa15.85■□□□□ 0.13
SF1-216ENST00000486867 FSD1Q9BTV5 496 aa15.85■□□□□ 0.13
SF1-216ENST00000486867 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.85■□□□□ 0.13
SF1-216ENST00000486867 GINM1Q9NU53 330 aa15.85■□□□□ 0.13
SF1-216ENST00000486867 LAMA4Q16363 1823 aa15.84■□□□□ 0.13
SF1-216ENST00000486867 PRKAB2O43741 272 aa15.84■□□□□ 0.13
SF1-216ENST00000486867 HLA-DOAP06340 250 aa15.84■□□□□ 0.13
SF1-216ENST00000486867 CAP2P40123 477 aa15.84■□□□□ 0.13
SF1-216ENST00000486867 RRP1BQ14684 758 aaKnown RBP15.84■□□□□ 0.13
SF1-216ENST00000486867 TATDN1Q6P1N9 297 aa15.84■□□□□ 0.13
SF1-216ENST00000486867 CENPQQ7L2Z9 268 aaPredicted RBP15.84■□□□□ 0.13
SF1-216ENST00000486867 TTC6Q86TZ1 520 aa15.84■□□□□ 0.13
SF1-216ENST00000486867 SDR42E1Q8WUS8 393 aa15.84■□□□□ 0.13
SF1-216ENST00000486867 SAP30BPQ9UHR5 308 aaKnown RBP15.84■□□□□ 0.13
SF1-216ENST00000486867 SERPINB13Q9UIV8 391 aa15.84■□□□□ 0.13
SF1-216ENST00000486867 FAM196BA6NMK8 535 aa15.83■□□□□ 0.12
SF1-216ENST00000486867 GSG1L2A8MUP6 293 aa15.83■□□□□ 0.12
SF1-216ENST00000486867 M0R2C6 588 aa15.83■□□□□ 0.12
SF1-216ENST00000486867 GPAA1O43292 621 aa15.83■□□□□ 0.12
SF1-216ENST00000486867 PTPRAP18433 802 aa15.83■□□□□ 0.12
SF1-216ENST00000486867 CTCFP49711 727 aaPredicted RBP15.83■□□□□ 0.12
SF1-216ENST00000486867 PLCD1P51178 756 aa15.83■□□□□ 0.12
SF1-216ENST00000486867 GTF2A2P52657 109 aa15.83■□□□□ 0.12
SF1-216ENST00000486867 OTUD5Q96G74 571 aa15.83■□□□□ 0.12
SF1-216ENST00000486867 RNF186Q9NXI6 227 aa15.83■□□□□ 0.12
SF1-216ENST00000486867 IRF6O14896 467 aa15.82■□□□□ 0.12
SF1-216ENST00000486867 HSPA8P11142 646 aaKnown RBP15.82■□□□□ 0.12
SF1-216ENST00000486867 GNAT2P19087 354 aa15.82■□□□□ 0.12
SF1-216ENST00000486867 SBK1Q52WX2 424 aa15.82■□□□□ 0.12
SF1-216ENST00000486867 NOM1Q5C9Z4 860 aaKnown RBP15.82■□□□□ 0.12
SF1-216ENST00000486867 C12orf60Q5U649 245 aa15.82■□□□□ 0.12
SF1-216ENST00000486867 ERICH6BQ5W0A0 696 aa15.82■□□□□ 0.12
SF1-216ENST00000486867 IFNL1Q8IU54 200 aa15.82■□□□□ 0.12
SF1-216ENST00000486867 BEGAINQ9BUH8 593 aa15.82■□□□□ 0.12
SF1-216ENST00000486867 TBC1D2Q9BYX2 928 aa15.82■□□□□ 0.12
SF1-216ENST00000486867 ZCCHC17Q9NP64 241 aaKnown RBP15.82■□□□□ 0.12
SF1-216ENST00000486867 SLC4A4Q9Y6R1 1079 aa15.82■□□□□ 0.12
SF1-216ENST00000486867 ROBO3Q96MS0 1386 aa15.82■□□□□ 0.12
SF1-216ENST00000486867 CXCL11O14625 94 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 FOXP2O15409 715 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 SHMT1P34896 483 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 MKRN3Q13064 507 aaKnown RBP15.81■□□□□ 0.12
SF1-216ENST00000486867 MOGSQ13724 837 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 TTC22Q5TAA0 569 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 BRI3BPQ8WY22 251 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 SEC62Q99442 399 aaKnown RBP15.81■□□□□ 0.12
SF1-216ENST00000486867 PTPN18Q99952 460 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 PRDM10Q9NQV6 1147 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 HELLSQ9NRZ9 838 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 MCM9Q9NXL9 1143 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 AFG3L2Q9Y4W6 797 aa15.81■□□□□ 0.12
SF1-216ENST00000486867 IGF2BP3O00425 579 aaKnown RBP eCLIP15.8■□□□□ 0.12
SF1-216ENST00000486867 ALDH1A1P00352 501 aa15.8■□□□□ 0.12
SF1-216ENST00000486867 ASNSP08243 561 aa15.8■□□□□ 0.12
SF1-216ENST00000486867 CETPP11597 493 aa15.8■□□□□ 0.12
SF1-216ENST00000486867 GSPT1P15170 499 aaKnown RBP15.8■□□□□ 0.12
SF1-216ENST00000486867 JAG1P78504 1218 aa15.8■□□□□ 0.12
SF1-216ENST00000486867 SNAPC2Q13487 334 aa15.8■□□□□ 0.12
SF1-216ENST00000486867 CTR9Q6PD62 1173 aa15.8■□□□□ 0.12
SF1-216ENST00000486867 CRACR2BQ8N4Y2 399 aaPredicted RBP15.8■□□□□ 0.12
SF1-216ENST00000486867 EPB41L4AQ9HCS5 686 aaPredicted RBP15.8■□□□□ 0.12
SF1-216ENST00000486867 PICK1Q9NRD5 415 aa15.8■□□□□ 0.12
SF1-216ENST00000486867 MYH4Q9Y623 1939 aa15.8■□□□□ 0.12
SF1-216ENST00000486867 PATL2C9JE40 543 aaKnown RBP15.79■□□□□ 0.12
SF1-216ENST00000486867 USP17L12C9JPN9 530 aa15.79■□□□□ 0.12
SF1-216ENST00000486867 USP17L21D6R901 530 aa15.79■□□□□ 0.12
SF1-216ENST00000486867 POLR3DP05423 398 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms