RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 USP26Q9BXU7 913 aa15.27■□□□□ 0.04
HDAC6-229ENST00000486665 VEZTQ9HBM0 779 aa15.27■□□□□ 0.04
HDAC6-229ENST00000486665 DCP1AQ9NPI6 582 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-229ENST00000486665 ATP8A2Q9NTI2 1148 aa15.27■□□□□ 0.04
HDAC6-229ENST00000486665 PDE4DIPQ5VU43 2346 aa15.27■□□□□ 0.03
HDAC6-229ENST00000486665 FLT1P17948 1338 aa15.26■□□□□ 0.03
HDAC6-229ENST00000486665 TCP10Q12799 353 aa15.26■□□□□ 0.03
HDAC6-229ENST00000486665 SAP30BPQ9UHR5 308 aaKnown RBP15.26■□□□□ 0.03
HDAC6-229ENST00000486665 RPAP1Q9BWH6 1393 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-229ENST00000486665 CYP2D7A0A087X1C5 515 aa15.25■□□□□ 0.03
HDAC6-229ENST00000486665 SMIM22K7EJ46 135 aa15.25■□□□□ 0.03
HDAC6-229ENST00000486665 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
HDAC6-229ENST00000486665 REC8O95072 547 aa15.25■□□□□ 0.03
HDAC6-229ENST00000486665 CYP2D6P10635 497 aa15.25■□□□□ 0.03
HDAC6-229ENST00000486665 EVX2Q03828 476 aa15.25■□□□□ 0.03
HDAC6-229ENST00000486665 FKBP1CQ5VVH2 108 aa15.25■□□□□ 0.03
HDAC6-229ENST00000486665 GIMAP6Q6P9H5 292 aa15.25■□□□□ 0.03
HDAC6-229ENST00000486665 CTR9Q6PD62 1173 aa15.25■□□□□ 0.03
HDAC6-229ENST00000486665 SH3BP5LQ7L8J4 393 aa15.25■□□□□ 0.03
HDAC6-229ENST00000486665 OSBPL5Q9H0X9 879 aaPredicted RBP15.25■□□□□ 0.03
HDAC6-229ENST00000486665 TMOD2Q9NZR1 351 aa15.25■□□□□ 0.03
HDAC6-229ENST00000486665 RBM8AQ9Y5S9 174 aaKnown RBP15.25■□□□□ 0.03
HDAC6-229ENST00000486665 USP17L12C9JPN9 530 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 USP17L21D6R901 530 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 ENTPD3O75355 529 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 TBC1D8O95759 1140 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 TDO2P48775 406 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 FKBP1BP68106 108 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
HDAC6-229ENST00000486665 FAM151AQ8WW52 585 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 NACAP1Q9BZK3 213 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 NAPBQ9H115 298 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 MCM9Q9NXL9 1143 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 PALD1Q9ULE6 856 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 FZD1Q9UP38 647 aa15.24■□□□□ 0.03
HDAC6-229ENST00000486665 U3KPZ7 1027 aaPredicted RBP15.24■□□□□ 0.03
HDAC6-229ENST00000486665 DDTLA6NHG4 134 aaPredicted RBP15.23■□□□□ 0.03
HDAC6-229ENST00000486665 RASA3Q14644 834 aa15.23■□□□□ 0.03
HDAC6-229ENST00000486665 NECTIN1Q15223 517 aa15.23■□□□□ 0.03
HDAC6-229ENST00000486665 SLC4A8Q2Y0W8 1093 aa15.23■□□□□ 0.03
HDAC6-229ENST00000486665 CTU1Q7Z7A3 348 aaKnown RBP15.23■□□□□ 0.03
HDAC6-229ENST00000486665 FAM83AQ86UY5 434 aa15.23■□□□□ 0.03
HDAC6-229ENST00000486665 CDAN1Q8IWY9 1227 aa15.23■□□□□ 0.03
HDAC6-229ENST00000486665 TMEM39BQ9GZU3 492 aa15.23■□□□□ 0.03
HDAC6-229ENST00000486665 MINDY4BA8MYZ0 360 aa15.22■□□□□ 0.03
HDAC6-229ENST00000486665 SLURP2P0DP57 97 aa15.22■□□□□ 0.03
HDAC6-229ENST00000486665 PLCD1P51178 756 aa15.22■□□□□ 0.03
HDAC6-229ENST00000486665 PRKG1Q13976 671 aa15.22■□□□□ 0.03
HDAC6-229ENST00000486665 SBK1Q52WX2 424 aa15.22■□□□□ 0.03
HDAC6-229ENST00000486665 DEFB129Q9H1M3 183 aa15.22■□□□□ 0.03
HDAC6-229ENST00000486665 R3HDMLQ9H3Y0 253 aa15.22■□□□□ 0.03
HDAC6-229ENST00000486665 CTNNA3Q9UI47 895 aa15.22■□□□□ 0.03
HDAC6-229ENST00000486665 TAF6LQ9Y6J9 622 aa15.22■□□□□ 0.03
HDAC6-229ENST00000486665 SLC27A2O14975 620 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 EIF5BO60841 1220 aaKnown RBP15.21■□□□□ 0.03
HDAC6-229ENST00000486665 POLR3DP05423 398 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-229ENST00000486665 TNNI2P48788 182 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 HAND2P61296 217 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 TTLL12Q14166 644 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-229ENST00000486665 C12orf60Q5U649 245 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 CREB3L3Q68CJ9 461 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 APOBEC3FQ8IUX4 373 aaKnown RBP15.21■□□□□ 0.03
HDAC6-229ENST00000486665 ZNF296Q8WUU4 475 aaPredicted RBP15.21■□□□□ 0.03
HDAC6-229ENST00000486665 DDRGK1Q96HY6 314 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 TEPSINQ96N21 525 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 NBPF3Q9H094 633 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 INCENPQ9NQS7 918 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 HPS5Q9UPZ3 1129 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 TACC3Q9Y6A5 838 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 ECM29Q5VYK3 1845 aa15.21■□□□□ 0.03
HDAC6-229ENST00000486665 CDK5RAP2Q96SN8 1893 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 ZMYM6O95789 1325 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 SSC5DA1L4H1 1573 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 ZNF213O14771 459 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 EPB41L2O43491 1005 aaKnown RBP15.2■□□□□ 0.02
HDAC6-229ENST00000486665 CYP21A2P08686 494 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 HSPA4P34932 840 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 CTDSPL2Q05D32 466 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 PPARAQ07869 468 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 ZSCAN29Q8IWY8 852 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-229ENST00000486665 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 STK11IPQ8N1F8 1099 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 KCNB2Q92953 911 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 ARPP21Q9UBL0 812 aaPredicted RBP15.2■□□□□ 0.02
HDAC6-229ENST00000486665 HTTP42858 3142 aa15.2■□□□□ 0.02
HDAC6-229ENST00000486665 TM4SF4P48230 202 aa15.19■□□□□ 0.02
HDAC6-229ENST00000486665 TNFAIP1Q13829 316 aa15.19■□□□□ 0.02
HDAC6-229ENST00000486665 IMMTQ16891 758 aaKnown RBP15.19■□□□□ 0.02
HDAC6-229ENST00000486665 NBPF12Q5TAG4 269 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-229ENST00000486665 REM2Q8IYK8 340 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-229ENST00000486665 DYNLL2Q96FJ2 89 aa15.19■□□□□ 0.02
HDAC6-229ENST00000486665 ANAPC4Q9UJX5 808 aa15.19■□□□□ 0.02
HDAC6-229ENST00000486665 FOCADQ5VW36 1801 aa15.18■□□□□ 0.02
HDAC6-229ENST00000486665 TTC6Q86TZ1 520 aa15.18■□□□□ 0.02
HDAC6-229ENST00000486665 TBC1D10CQ8IV04 446 aa15.18■□□□□ 0.02
HDAC6-229ENST00000486665 C22orf23Q9BZE7 217 aa15.18■□□□□ 0.02
HDAC6-229ENST00000486665 DHX36Q9H2U1 1008 aaKnown RBP15.18■□□□□ 0.02
HDAC6-229ENST00000486665 PI4KBQ9UBF8 816 aa15.18■□□□□ 0.02
HDAC6-229ENST00000486665 SNX14Q9Y5W7 946 aa15.18■□□□□ 0.02
HDAC6-229ENST00000486665 ATRNL1Q5VV63 1379 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms