RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 AGPSO00116 658 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 ATP6V1AP38606 617 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 ARHGAP25P42331 645 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 GCKRQ14397 625 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 BANK1Q8NDB2 785 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 ALG1Q9BT22 464 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 RABEP2Q9H5N1 569 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.09□□□□□ -0.47
CCDC171-208ENST00000486641 SLIT1O75093 1534 aa12.09□□□□□ -0.47
CCDC171-208ENST00000486641 M0R2C6 588 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 MFAP3LO75121 409 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 PBX1P40424 430 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 TTC39AQ5SRH9 613 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 NT5DC1Q5TFE4 455 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 KRT40Q6A162 431 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 ELOA2Q8IYF1 753 aaPredicted RBP12.08□□□□□ -0.48
CCDC171-208ENST00000486641 GRAMD1CQ8IYS0 662 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 COG1Q8WTW3 980 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 SERTAD1Q9UHV2 236 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 DACH1Q9UI36 760 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 SUFUQ9UMX1 484 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 FXR1P51114 621 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC171-208ENST00000486641 FAM76AQ8TAV0 307 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 SEC31BQ9NQW1 1179 aa12.08□□□□□ -0.48
CCDC171-208ENST00000486641 CCDC196A0A1B0GTZ2 297 aa12.07□□□□□ -0.48
CCDC171-208ENST00000486641 POLR2DO15514 142 aaKnown RBP12.07□□□□□ -0.48
CCDC171-208ENST00000486641 ZMYND10O75800 440 aa12.07□□□□□ -0.48
CCDC171-208ENST00000486641 ANTXR2P58335 489 aa12.07□□□□□ -0.48
CCDC171-208ENST00000486641 ERVK-24P63145 666 aa12.07□□□□□ -0.48
CCDC171-208ENST00000486641 GRIN1Q05586 938 aa12.07□□□□□ -0.48
CCDC171-208ENST00000486641 PDIA6Q15084 440 aa12.07□□□□□ -0.48
CCDC171-208ENST00000486641 NEUROD6Q96NK8 337 aa12.07□□□□□ -0.48
CCDC171-208ENST00000486641 GYPCP04921 128 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 PLCD1P51178 756 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 MAP9Q49MG5 647 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 MB21D2Q8IYB1 491 aaPredicted RBP12.06□□□□□ -0.48
CCDC171-208ENST00000486641 BCAS4Q8TDM0 211 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 MMS19Q96T76 1030 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 MYD88Q99836 296 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 DDX21Q9NR30 783 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC171-208ENST00000486641 MYO1AQ9UBC5 1043 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 HDAC6Q9UBN7 1215 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 ADD3Q9UEY8 706 aaKnown RBP12.06□□□□□ -0.48
CCDC171-208ENST00000486641 WWC3Q9ULE0 1092 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 HEG1Q9ULI3 1381 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 RNF113AO15541 343 aaKnown RBP12.06□□□□□ -0.48
CCDC171-208ENST00000486641 INPP5BP32019 993 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 AKAP4Q5JQC9 854 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 ZNF530Q6P9A1 599 aaPredicted RBP12.06□□□□□ -0.48
CCDC171-208ENST00000486641 GSPT2Q8IYD1 628 aaKnown RBP12.06□□□□□ -0.48
CCDC171-208ENST00000486641 CNPY4Q8N129 248 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 KRI1Q8N9T8 703 aaKnown RBP12.06□□□□□ -0.48
CCDC171-208ENST00000486641 MYH8P13535 1937 aa12.06□□□□□ -0.48
CCDC171-208ENST00000486641 C4AP0C0L4 1744 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 C4BP0C0L5 1744 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 GOLGA6CA6NDK9 693 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 RNF225M0QZC1 329 aaPredicted RBP12.05□□□□□ -0.48
CCDC171-208ENST00000486641 ENC1O14682 589 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 RNMTO43148 476 aaKnown RBP12.05□□□□□ -0.48
CCDC171-208ENST00000486641 GOLGA6DP0CG33 693 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 MYBL2P10244 700 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 FECHP22830 423 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 ERCC5P28715 1186 aaPredicted RBP12.05□□□□□ -0.48
CCDC171-208ENST00000486641 USP8P40818 1118 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 STX17P56962 302 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 TIMM10P62072 90 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 NEXNQ0ZGT2 675 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 TRAPPC11Q7Z392 1133 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 STK11IPQ8N1F8 1099 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 OSBP2Q969R2 916 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 CRACR2AQ9BSW2 395 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 CAPS2Q9BXY5 557 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 GOLGA6AQ9NYA3 693 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 TRIM10Q9UDY6 481 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 FOXP2O15409 715 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 SRGAP2O75044 1071 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 MCM3P25205 808 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 PPFIA1Q13136 1202 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 TMTC1Q8IUR5 882 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 CNGA4Q8IV77 575 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 PRPF38AQ8NAV1 312 aaKnown RBP12.05□□□□□ -0.48
CCDC171-208ENST00000486641 PHKBQ93100 1093 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 SLF1Q9BQI6 1058 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 SELENOOQ9BVL4 669 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 SAMM50Q9Y512 469 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 NWD2Q9ULI1 1742 aa12.05□□□□□ -0.48
CCDC171-208ENST00000486641 FGAP02671 866 aa12.04□□□□□ -0.48
CCDC171-208ENST00000486641 MYL6BP14649 208 aa12.04□□□□□ -0.48
CCDC171-208ENST00000486641 RXRAP19793 462 aa12.04□□□□□ -0.48
CCDC171-208ENST00000486641 HDGFP51858 240 aaKnown RBP12.04□□□□□ -0.48
CCDC171-208ENST00000486641 IMMTQ16891 758 aaKnown RBP12.04□□□□□ -0.48
CCDC171-208ENST00000486641 SPATA1Q5VX52 437 aa12.04□□□□□ -0.48
CCDC171-208ENST00000486641 TTC19Q6DKK2 380 aaPredicted RBP12.04□□□□□ -0.48
CCDC171-208ENST00000486641 KLHL10Q6JEL2 608 aa12.04□□□□□ -0.48
CCDC171-208ENST00000486641 TRIML1Q8N9V2 468 aa12.04□□□□□ -0.48
CCDC171-208ENST00000486641 CCDC51Q96ER9 411 aa12.04□□□□□ -0.48
CCDC171-208ENST00000486641 JPH2Q9BR39 696 aaPredicted RBP12.04□□□□□ -0.48
CCDC171-208ENST00000486641 GUCA1BQ9UMX6 200 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms