RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 COPRSQ9NQ92 184 aa10.74□□□□□ -0.69
COL12A1-208ENST00000486533 STK24Q9Y6E0 443 aa10.74□□□□□ -0.69
COL12A1-208ENST00000486533 OTOFQ9HC10 1997 aa10.74□□□□□ -0.69
COL12A1-208ENST00000486533 USP2O75604 605 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-208ENST00000486533 ZBTB48P10074 688 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-208ENST00000486533 ZNF445P59923 1031 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 HS1BP3Q53T59 392 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 WNK4Q96J92 1243 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 MANSC4A6NHS7 340 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-208ENST00000486533 UNCXA6NJT0 531 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 ESPNB1AK53 854 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 NCLP19338 710 aaKnown RBP10.73□□□□□ -0.69
COL12A1-208ENST00000486533 MX1P20591 662 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 PRDX5P30044 214 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 PHKA1P46020 1223 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 NASPP49321 788 aaPredicted RBP10.73□□□□□ -0.69
COL12A1-208ENST00000486533 ATP8B2P98198 1209 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 HHIPL2Q6UWX4 724 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 INTS4Q96HW7 963 aaKnown RBP10.73□□□□□ -0.69
COL12A1-208ENST00000486533 TEPSINQ96N21 525 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 MRIQ9BWK5 157 aa10.73□□□□□ -0.69
COL12A1-208ENST00000486533 STK25O00506 426 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 ALDH1A1P00352 501 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 LDHBP07195 334 aaKnown RBP10.72□□□□□ -0.69
COL12A1-208ENST00000486533 ADORA1P30542 326 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 INHBEP58166 350 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 TFCP2Q12800 502 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 MTX1Q13505 466 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 DIXDC1Q155Q3 683 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 CCDC102BQ68D86 513 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 APOBEC3HQ6NTF7 200 aaKnown RBP10.72□□□□□ -0.69
COL12A1-208ENST00000486533 TMEM92Q6UXU6 159 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 CTU1Q7Z7A3 348 aaKnown RBP10.72□□□□□ -0.69
COL12A1-208ENST00000486533 ZNF296Q8WUU4 475 aaPredicted RBP10.72□□□□□ -0.69
COL12A1-208ENST00000486533 ELP3Q9H9T3 547 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 STAP2Q9UGK3 403 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 DENND2AQ9ULE3 1009 aa10.72□□□□□ -0.69
COL12A1-208ENST00000486533 A0A1B0GUL7 405 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 GPR25O00155 361 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 SEMA3EO15041 775 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 CYP2E1P05181 493 aaPredicted RBP10.71□□□□□ -0.69
COL12A1-208ENST00000486533 EMP3P54852 163 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 TIMM10P62072 90 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 OPTNQ96CV9 577 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 IL17RAQ96F46 866 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 PPP1R9BQ96SB3 815 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 ESYT1Q9BSJ8 1104 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 AKAP2Q9Y2D5 859 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 DAGLAQ9Y4D2 1042 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 CSADQ9Y600 493 aa10.71□□□□□ -0.69
COL12A1-208ENST00000486533 CENPFP49454 3210 aa10.71□□□□□ -0.7
COL12A1-208ENST00000486533 LAMB1P07942 1786 aa10.71□□□□□ -0.7
COL12A1-208ENST00000486533 CD2BP2O95400 341 aaKnown RBP10.7□□□□□ -0.7
COL12A1-208ENST00000486533 PDIA4P13667 645 aaKnown RBP10.7□□□□□ -0.7
COL12A1-208ENST00000486533 RASGRF1Q13972 1273 aa10.7□□□□□ -0.7
COL12A1-208ENST00000486533 VGLL4Q14135 290 aa10.7□□□□□ -0.7
COL12A1-208ENST00000486533 FKBP1CQ5VVH2 108 aa10.7□□□□□ -0.7
COL12A1-208ENST00000486533 MCTP1Q6DN14 999 aa10.7□□□□□ -0.7
COL12A1-208ENST00000486533 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-208ENST00000486533 FAM83AQ86UY5 434 aa10.7□□□□□ -0.7
COL12A1-208ENST00000486533 ZGPATQ8N5A5 531 aaKnown RBP10.7□□□□□ -0.7
COL12A1-208ENST00000486533 HOOK2Q96ED9 719 aa10.7□□□□□ -0.7
COL12A1-208ENST00000486533 NEUROD6Q96NK8 337 aa10.7□□□□□ -0.7
COL12A1-208ENST00000486533 MFRPQ9BY79 579 aa10.7□□□□□ -0.7
COL12A1-208ENST00000486533 RRAGDQ9NQL2 400 aaPredicted RBP10.7□□□□□ -0.7
COL12A1-208ENST00000486533 SALL1Q9NSC2 1324 aa10.7□□□□□ -0.7
COL12A1-208ENST00000486533 PNMA6EA0A0J9YXQ4 647 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 IGF2BP3O00425 579 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL12A1-208ENST00000486533 MSNP26038 577 aaKnown RBP10.69□□□□□ -0.7
COL12A1-208ENST00000486533 GJA5P36382 358 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 MAP3K9P80192 1104 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 TCP10Q12799 353 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 G3BP1Q13283 466 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL12A1-208ENST00000486533 GORABQ5T7V8 394 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 OTUD7BQ6GQQ9 843 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 DZIP1Q86YF9 867 aaKnown RBP10.69□□□□□ -0.7
COL12A1-208ENST00000486533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.69□□□□□ -0.7
COL12A1-208ENST00000486533 XAGE2Q96GT9 111 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 WRNIP1Q96S55 665 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 R3HDMLQ9H3Y0 253 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 ABCF2Q9UG63 623 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 MYH2Q9UKX2 1941 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 HTTP42858 3142 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 TRIM6-TRIM34B2RNG4 842 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 APBB1O00213 710 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 FKTNO75072 461 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 NOM1Q5C9Z4 860 aaKnown RBP10.69□□□□□ -0.7
COL12A1-208ENST00000486533 DCAF15Q66K64 600 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 CDC42EP5Q6NZY7 148 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 GPATCH3Q96I76 525 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 NAP1L5Q96NT1 182 aaPredicted RBP10.69□□□□□ -0.7
COL12A1-208ENST00000486533 CFHR5Q9BXR6 569 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 PANK2Q9BZ23 570 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 USP40Q9NVE5 1235 aa10.69□□□□□ -0.7
COL12A1-208ENST00000486533 RPAP1Q9BWH6 1393 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-208ENST00000486533 SALL3Q9BXA9 1300 aa10.68□□□□□ -0.7
COL12A1-208ENST00000486533 SMARCA5O60264 1052 aaPredicted RBP10.68□□□□□ -0.7
COL12A1-208ENST00000486533 TPM2P07951 284 aa10.68□□□□□ -0.7
COL12A1-208ENST00000486533 NEK4P51957 841 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms