RNA–Protein interactions for RNA: ENST00000486425.1

MUC4-222, Transcript of mucin 4, cell surface associated, human

TSL 4

Gene MUC4, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC4-222	ENST00000486425	COL23A1	Q86Y22	540 aa	Predicted RBP	8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	HSCB	Q8IWL3	235 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	MPND	Q8N594	471 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	HPS1	Q92902	700 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	MAP4K1	Q92918	833 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	NLRP3	Q96P20	1036 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	MPHOSPH8	Q99549	860 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	FSD1	Q9BTV5	496 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	ANTXR1	Q9H6X2	564 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	ANO2	Q9NQ90	1003 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	SEC31B	Q9NQW1	1179 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	HELLS	Q9NRZ9	838 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	TFCP2L1	Q9NZI6	479 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	MYH1	P12882	1939 aa		8.92	□□□□□ -0.98
MUC4-222	ENST00000486425	SLX4	Q8IY92	1834 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	IRS2	Q9Y4H2	1338 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	POTEC	B2RU33	542 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	IGSF3	O75054	1194 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	ZFY	P08048	801 aa	Predicted RBP	8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	UQCRFS1P1	P0C7P4	283 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	SLC5A1	P13866	664 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	POLD1	P28340	1107 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	ADORA1	P30542	326 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	DDIT3	P35638	169 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	MCAM	P43121	646 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	MCM2	P49736	904 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	UBE4A	Q14139	1066 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	NECTIN1	Q15223	517 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	TSGA10IP	Q3SY00	556 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	TTC39A	Q5SRH9	613 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	ZMYM1	Q5SVZ6	1142 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	CWC27	Q6UX04	472 aa	Known RBP	8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	ANKRD18A	Q8IVF6	992 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	ARMC2	Q8NEN0	867 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	NEUROD6	Q96NK8	337 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	CCDC85A	Q96PX6	553 aa	Predicted RBP	8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	TM6SF1	Q9BZW5	370 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	BCL11A	Q9H165	835 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	DACH1	Q9UI36	760 aa		8.91	□□□□□ -0.98
MUC4-222	ENST00000486425	COL1A1	P02452	1464 aa	Predicted RBP	8.9	□□□□□ -0.98
MUC4-222	ENST00000486425		K7ELQ4	463 aa	Predicted RBP	8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	POLRMT	O00411	1230 aa	Known RBP	8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	CHRND	Q07001	517 aa		8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	TTF1	Q15361	905 aa	Predicted RBP	8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	CCDC102B	Q68D86	513 aa		8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	PRR5L	Q6MZQ0	368 aa		8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	KIAA1211	Q6ZU35	1233 aa		8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	CNBD1	Q8NA66	436 aa		8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	FOXJ1	Q92949	421 aa		8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	FAM227B	Q96M60	508 aa		8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	HMG20B	Q9P0W2	317 aa		8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	PALD1	Q9ULE6	856 aa		8.9	□□□□□ -0.98
MUC4-222	ENST00000486425	ARFGEF1	Q9Y6D6	1849 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	ZMYM6	O95789	1325 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	GOLIM4	O00461	696 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	TAF5L	O75529	589 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	HOXA10	P31260	410 aa	Predicted RBP	8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	SCARF1	Q14162	830 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	GPR162	Q16538	588 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	MCMDC2	Q4G0Z9	681 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	TMED8	Q6PL24	325 aa	Predicted RBP	8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	C15orf52	Q6ZUT6	534 aa	Known RBP	8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	SMIM5	Q71RC9	77 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	DDX46	Q7L014	1031 aa	Known RBP	8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	ZNF589	Q86UQ0	364 aa	Predicted RBP	8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	NLGN2	Q8NFZ4	835 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	EDC3	Q96F86	508 aa	Known RBP	8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	DNAJC2	Q99543	621 aa	Known RBP	8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	DSCC1	Q9BVC3	393 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	MINPP1	Q9UNW1	487 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	CD2AP	Q9Y5K6	639 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	SNX14	Q9Y5W7	946 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	FER1L6	Q2WGJ9	1857 aa		8.89	□□□□□ -0.99
MUC4-222	ENST00000486425	MAST3	O60307	1309 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	FAM177B	A6PVY3	158 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	RNF113A	O15541	343 aa	Known RBP	8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	GRIN3B	O60391	1043 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	SERPINB2	P05120	415 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	GTF2E1	P29083	439 aa	Predicted RBP	8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	PHKA1	P46020	1223 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	RPS8	P62241	208 aa	Known RBP	8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	ST5	P78524	1137 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	PTH1R	Q03431	593 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	DDR1	Q08345	913 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	GRAP	Q13588	217 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	GORAB	Q5T7V8	394 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	ZSCAN25	Q6NSZ9	544 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	BICDL1	Q6ZP65	573 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	TMC4	Q7Z404	712 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	NLGN1	Q8N2Q7	840 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	FAM174A	Q8TBP5	190 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	GRAPL	Q8TC17	118 aa	Predicted RBP	8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	CELF1	Q92879	486 aa	Known RBP	8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	TTC14	Q96N46	770 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	ANKRD2	Q9GZV1	360 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	WASF2	Q9Y6W5	498 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	PCNT	O95613	3336 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	SCN9A	Q15858	1988 aa		8.88	□□□□□ -0.99
MUC4-222	ENST00000486425	CYP2E1	P05181	493 aa	Predicted RBP	8.87	□□□□□ -0.99

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms