RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 USP5P45974 858 aa15.64■□□□□ 0.09
CHMP3-208ENST00000486404 PPP4CP60510 307 aa15.64■□□□□ 0.09
CHMP3-208ENST00000486404 DYNLL1P63167 89 aaKnown RBP15.64■□□□□ 0.09
CHMP3-208ENST00000486404 FAM43AQ8N2R8 423 aa15.64■□□□□ 0.09
CHMP3-208ENST00000486404 ERO1AQ96HE7 468 aa15.64■□□□□ 0.09
CHMP3-208ENST00000486404 ZCCHC17Q9NP64 241 aaKnown RBP15.64■□□□□ 0.09
CHMP3-208ENST00000486404 HERC5Q9UII4 1024 aaKnown RBP15.64■□□□□ 0.09
CHMP3-208ENST00000486404 SMARCA5O60264 1052 aaPredicted RBP15.63■□□□□ 0.09
CHMP3-208ENST00000486404 TBC1D12O60347 775 aa15.63■□□□□ 0.09
CHMP3-208ENST00000486404 CTNND1O60716 968 aaKnown RBP15.63■□□□□ 0.09
CHMP3-208ENST00000486404 PDE6AP16499 860 aa15.63■□□□□ 0.09
CHMP3-208ENST00000486404 PKN2Q16513 984 aaKnown RBP15.63■□□□□ 0.09
CHMP3-208ENST00000486404 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.63■□□□□ 0.09
CHMP3-208ENST00000486404 PAG1Q9NWQ8 432 aa15.63■□□□□ 0.09
CHMP3-208ENST00000486404 SAP30BPQ9UHR5 308 aaKnown RBP15.63■□□□□ 0.09
CHMP3-208ENST00000486404 KCNH4Q9UQ05 1017 aa15.63■□□□□ 0.09
CHMP3-208ENST00000486404 ZHX2Q9Y6X8 837 aa15.63■□□□□ 0.09
CHMP3-208ENST00000486404 ZSWIM8A7E2V4 1837 aa15.62■□□□□ 0.09
CHMP3-208ENST00000486404 MAGEB6P1A0A0J9YX57 407 aa15.62■□□□□ 0.09
CHMP3-208ENST00000486404 BTBD19C9JJ37 291 aa15.62■□□□□ 0.09
CHMP3-208ENST00000486404 SLURP2P0DP57 97 aa15.62■□□□□ 0.09
CHMP3-208ENST00000486404 PTPRAP18433 802 aa15.62■□□□□ 0.09
CHMP3-208ENST00000486404 SLC4A8Q2Y0W8 1093 aa15.62■□□□□ 0.09
CHMP3-208ENST00000486404 SLC9C2Q5TAH2 1124 aa15.62■□□□□ 0.09
CHMP3-208ENST00000486404 BOLA2Q9H3K6 86 aa15.62■□□□□ 0.09
CHMP3-208ENST00000486404 PI4KBQ9UBF8 816 aa15.62■□□□□ 0.09
CHMP3-208ENST00000486404 BAZ2AQ9UIF9 1905 aaKnown RBP15.61■□□□□ 0.09
CHMP3-208ENST00000486404 ATP5JP18859 108 aa15.61■□□□□ 0.09
CHMP3-208ENST00000486404 SP3Q02447 781 aa15.61■□□□□ 0.09
CHMP3-208ENST00000486404 MAP3K10Q02779 954 aa15.61■□□□□ 0.09
CHMP3-208ENST00000486404 GADL1Q6ZQY3 521 aa15.61■□□□□ 0.09
CHMP3-208ENST00000486404 ANKRD23Q86SG2 305 aa15.61■□□□□ 0.09
CHMP3-208ENST00000486404 CD99L2Q8TCZ2 262 aa15.61■□□□□ 0.09
CHMP3-208ENST00000486404 CRBNQ96SW2 442 aa15.61■□□□□ 0.09
CHMP3-208ENST00000486404 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
CHMP3-208ENST00000486404 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
CHMP3-208ENST00000486404 TRIM17Q9Y577 477 aa15.61■□□□□ 0.09
CHMP3-208ENST00000486404 ZNF532Q9HCE3 1301 aa15.61■□□□□ 0.09
CHMP3-208ENST00000486404 TRIM75PA6NK02 468 aa15.6■□□□□ 0.09
CHMP3-208ENST00000486404 PDHXO00330 501 aa15.6■□□□□ 0.09
CHMP3-208ENST00000486404 CXCL11O14625 94 aa15.6■□□□□ 0.09
CHMP3-208ENST00000486404 ARHGEF6Q15052 776 aa15.6■□□□□ 0.09
CHMP3-208ENST00000486404 FASTKD5Q7L8L6 764 aaKnown RBP15.6■□□□□ 0.09
CHMP3-208ENST00000486404 PARK7Q99497 189 aaKnown RBP15.6■□□□□ 0.09
CHMP3-208ENST00000486404 HAUS7Q99871 368 aa15.6■□□□□ 0.09
CHMP3-208ENST00000486404 CRNKL1Q9BZJ0 848 aaKnown RBP15.6■□□□□ 0.09
CHMP3-208ENST00000486404 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.6■□□□□ 0.09
CHMP3-208ENST00000486404 PALD1Q9ULE6 856 aa15.6■□□□□ 0.09
CHMP3-208ENST00000486404 MGAMO43451 1857 aa15.6■□□□□ 0.09
CHMP3-208ENST00000486404 A0A0G2JLL6 359 aaPredicted RBP15.59■□□□□ 0.09
CHMP3-208ENST00000486404 KIF22Q14807 665 aa15.59■□□□□ 0.09
CHMP3-208ENST00000486404 FBXO46Q6PJ61 603 aaPredicted RBP15.59■□□□□ 0.09
CHMP3-208ENST00000486404 PRRT2Q7Z6L0 340 aaPredicted RBP15.59■□□□□ 0.09
CHMP3-208ENST00000486404 EDC3Q96F86 508 aaKnown RBP15.59■□□□□ 0.09
CHMP3-208ENST00000486404 TBC1D2Q9BYX2 928 aa15.59■□□□□ 0.09
CHMP3-208ENST00000486404 ECHDC1Q9NTX5 307 aa15.59■□□□□ 0.09
CHMP3-208ENST00000486404 HPS5Q9UPZ3 1129 aa15.59■□□□□ 0.09
CHMP3-208ENST00000486404 TLR2O60603 784 aa15.58■□□□□ 0.08
CHMP3-208ENST00000486404 CAP2P40123 477 aa15.58■□□□□ 0.08
CHMP3-208ENST00000486404 ZSCAN25Q6NSZ9 544 aa15.58■□□□□ 0.08
CHMP3-208ENST00000486404 OTOP1Q7RTM1 612 aa15.58■□□□□ 0.08
CHMP3-208ENST00000486404 CCDC84Q86UT8 332 aaPredicted RBP15.58■□□□□ 0.08
CHMP3-208ENST00000486404 EFCC1Q9HA90 598 aa15.58■□□□□ 0.08
CHMP3-208ENST00000486404 AS3MTQ9HBK9 375 aa15.58■□□□□ 0.08
CHMP3-208ENST00000486404 AFG3L2Q9Y4W6 797 aa15.58■□□□□ 0.08
CHMP3-208ENST00000486404 PCDHB15Q9Y5E8 787 aa15.58■□□□□ 0.08
CHMP3-208ENST00000486404 GDF11O95390 407 aa15.57■□□□□ 0.08
CHMP3-208ENST00000486404 TTC6Q86TZ1 520 aa15.57■□□□□ 0.08
CHMP3-208ENST00000486404 FOXP4Q8IVH2 680 aaPredicted RBP15.57■□□□□ 0.08
CHMP3-208ENST00000486404 RIOK1Q9BRS2 568 aaKnown RBP15.57■□□□□ 0.08
CHMP3-208ENST00000486404 USP17L5A8MUK1 530 aa15.56■□□□□ 0.08
CHMP3-208ENST00000486404 MBD4O95243 580 aa15.56■□□□□ 0.08
CHMP3-208ENST00000486404 POLR3DP05423 398 aaPredicted RBP15.56■□□□□ 0.08
CHMP3-208ENST00000486404 ASNSP08243 561 aa15.56■□□□□ 0.08
CHMP3-208ENST00000486404 ADD2P35612 726 aa15.56■□□□□ 0.08
CHMP3-208ENST00000486404 LCORLQ8N3X6 602 aa15.56■□□□□ 0.08
CHMP3-208ENST00000486404 ZNF280CQ8ND82 737 aa15.56■□□□□ 0.08
CHMP3-208ENST00000486404 SMCR8Q8TEV9 937 aaPredicted RBP15.56■□□□□ 0.08
CHMP3-208ENST00000486404 DDRGK1Q96HY6 314 aa15.56■□□□□ 0.08
CHMP3-208ENST00000486404 DNAJC18Q9H819 358 aa15.56■□□□□ 0.08
CHMP3-208ENST00000486404 CPA4Q9UI42 421 aa15.56■□□□□ 0.08
CHMP3-208ENST00000486404 SERPINB13Q9UIV8 391 aa15.56■□□□□ 0.08
CHMP3-208ENST00000486404 RBBP6Q7Z6E9 1792 aaKnown RBP15.55■□□□□ 0.08
CHMP3-208ENST00000486404 TCRBV5S4A2TA0A5A2 114 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 SPP2Q13103 211 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 MOGSQ13724 837 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 TSHZ3Q63HK5 1081 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 AMOTL1Q8IY63 956 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 EHD4Q9H223 541 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 ARMT1Q9H993 441 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 GINM1Q9NU53 330 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 MCM9Q9NXL9 1143 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 PNMA3Q9UL41 463 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 ZBTB21Q9ULJ3 1066 aa15.55■□□□□ 0.08
CHMP3-208ENST00000486404 TTC41PQ6P2S7 1318 aa15.54■□□□□ 0.08
CHMP3-208ENST00000486404 ERC2O15083 957 aa15.54■□□□□ 0.08
CHMP3-208ENST00000486404 CYP2C8P10632 490 aa15.54■□□□□ 0.08
CHMP3-208ENST00000486404 HMGCS2P54868 508 aa15.54■□□□□ 0.08
CHMP3-208ENST00000486404 SOX10P56693 466 aa15.54■□□□□ 0.08
CHMP3-208ENST00000486404 LACTBP83111 547 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms