RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 PARK7Q99497 189 aaKnown RBP26.74■■□□□ 1.87
HLA-F-228ENST00000486194 MOGSQ13724 837 aa26.73■■□□□ 1.87
HLA-F-228ENST00000486194 FOXP4Q8IVH2 680 aaPredicted RBP26.73■■□□□ 1.87
HLA-F-228ENST00000486194 MAPKAPK5Q8IW41 473 aa26.73■■□□□ 1.87
HLA-F-228ENST00000486194 TRIM34Q9BYJ4 488 aa26.73■■□□□ 1.87
HLA-F-228ENST00000486194 ANTXR1Q9H6X2 564 aa26.73■■□□□ 1.87
HLA-F-228ENST00000486194 FAM196BA6NMK8 535 aa26.72■■□□□ 1.87
HLA-F-228ENST00000486194 GNRH1P01148 92 aa26.72■■□□□ 1.87
HLA-F-228ENST00000486194 SLURP2P0DP57 97 aa26.72■■□□□ 1.87
HLA-F-228ENST00000486194 NDUFB9Q9Y6M9 179 aa26.72■■□□□ 1.87
HLA-F-228ENST00000486194 DOCK1Q14185 1865 aa26.72■■□□□ 1.87
HLA-F-228ENST00000486194 HLA-DOAP06340 250 aa26.71■■□□□ 1.87
HLA-F-228ENST00000486194 CAP2P40123 477 aa26.71■■□□□ 1.87
HLA-F-228ENST00000486194 LACTBP83111 547 aaPredicted RBP26.71■■□□□ 1.87
HLA-F-228ENST00000486194 C17orf99Q6UX52 265 aa26.71■■□□□ 1.87
HLA-F-228ENST00000486194 CRACR2BQ8N4Y2 399 aaPredicted RBP26.71■■□□□ 1.87
HLA-F-228ENST00000486194 SLC45A1Q9Y2W3 748 aa26.71■■□□□ 1.87
HLA-F-228ENST00000486194 TRIM75PA6NK02 468 aa26.7■■□□□ 1.86
HLA-F-228ENST00000486194 DYNLL1P63167 89 aaKnown RBP26.7■■□□□ 1.86
HLA-F-228ENST00000486194 GPAT2Q6NUI2 795 aa26.7■■□□□ 1.86
HLA-F-228ENST00000486194 GADL1Q6ZQY3 521 aa26.7■■□□□ 1.86
HLA-F-228ENST00000486194 MIGA1Q8NAN2 632 aa26.7■■□□□ 1.86
HLA-F-228ENST00000486194 USP5P45974 858 aa26.69■■□□□ 1.86
HLA-F-228ENST00000486194 LRRCC1Q9C099 1032 aa26.69■■□□□ 1.86
HLA-F-228ENST00000486194 BCL11AQ9H165 835 aa26.69■■□□□ 1.86
HLA-F-228ENST00000486194 CPA4Q9UI42 421 aa26.69■■□□□ 1.86
HLA-F-228ENST00000486194 METTL16Q86W50 562 aaKnown RBP26.68■■□□□ 1.86
HLA-F-228ENST00000486194 DNAJC2Q99543 621 aaKnown RBP26.68■■□□□ 1.86
HLA-F-228ENST00000486194 AS3MTQ9HBK9 375 aa26.68■■□□□ 1.86
HLA-F-228ENST00000486194 GINM1Q9NU53 330 aa26.68■■□□□ 1.86
HLA-F-228ENST00000486194 PALD1Q9ULE6 856 aa26.68■■□□□ 1.86
HLA-F-228ENST00000486194 ADGRA2Q96PE1 1338 aa26.67■■□□□ 1.86
HLA-F-228ENST00000486194 USP17L5A8MUK1 530 aa26.67■■□□□ 1.86
HLA-F-228ENST00000486194 PRMT2P55345 433 aa26.67■■□□□ 1.86
HLA-F-228ENST00000486194 SLC9C2Q5TAH2 1124 aa26.67■■□□□ 1.86
HLA-F-228ENST00000486194 ZNF280CQ8ND82 737 aa26.67■■□□□ 1.86
HLA-F-228ENST00000486194 MYO5AQ9Y4I1 1855 aaKnown RBP26.67■■□□□ 1.86
HLA-F-228ENST00000486194 GOLIM4O00461 696 aa26.66■■□□□ 1.86
HLA-F-228ENST00000486194 ASNSP08243 561 aa26.66■■□□□ 1.86
HLA-F-228ENST00000486194 CAP1Q01518 475 aa26.66■■□□□ 1.86
HLA-F-228ENST00000486194 PROCA1Q8NCQ7 364 aaPredicted RBP26.66■■□□□ 1.86
HLA-F-228ENST00000486194 SAP30BPQ9UHR5 308 aaKnown RBP26.66■■□□□ 1.86
HLA-F-228ENST00000486194 AGTPBP1Q9UPW5 1226 aa26.66■■□□□ 1.86
HLA-F-228ENST00000486194 MAGEB6P1A0A0J9YX57 407 aa26.65■■□□□ 1.86
HLA-F-228ENST00000486194 ATP5JP18859 108 aa26.65■■□□□ 1.86
HLA-F-228ENST00000486194 SPP2Q13103 211 aa26.65■■□□□ 1.86
HLA-F-228ENST00000486194 NBPF11Q86T75 865 aa26.65■■□□□ 1.86
HLA-F-228ENST00000486194 ARMC5Q96C12 935 aa26.65■■□□□ 1.86
HLA-F-228ENST00000486194 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.65■■□□□ 1.86
HLA-F-228ENST00000486194 FOCADQ5VW36 1801 aa26.65■■□□□ 1.86
HLA-F-228ENST00000486194 CYP2C8P10632 490 aa26.64■■□□□ 1.86
HLA-F-228ENST00000486194 PDE6AP16499 860 aa26.64■■□□□ 1.86
HLA-F-228ENST00000486194 HOXD10P28358 340 aa26.64■■□□□ 1.86
HLA-F-228ENST00000486194 TTC6Q86TZ1 520 aa26.64■■□□□ 1.86
HLA-F-228ENST00000486194 CCDC84Q86UT8 332 aaPredicted RBP26.64■■□□□ 1.86
HLA-F-228ENST00000486194 PAG1Q9NWQ8 432 aa26.64■■□□□ 1.86
HLA-F-228ENST00000486194 PNMA3Q9UL41 463 aa26.64■■□□□ 1.86
HLA-F-228ENST00000486194 PABPC4Q13310 644 aaKnown RBP eCLIP26.63■■□□□ 1.85
HLA-F-228ENST00000486194 SLC9C1Q4G0N8 1177 aa26.63■■□□□ 1.85
HLA-F-228ENST00000486194 SMCR8Q8TEV9 937 aaPredicted RBP26.63■■□□□ 1.85
HLA-F-228ENST00000486194 RIOK1Q9BRS2 568 aaKnown RBP26.63■■□□□ 1.85
HLA-F-228ENST00000486194 ARHGAP39Q9C0H5 1083 aa26.63■■□□□ 1.85
HLA-F-228ENST00000486194 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.63■■□□□ 1.85
HLA-F-228ENST00000486194 DNAJC18Q9H819 358 aa26.63■■□□□ 1.85
HLA-F-228ENST00000486194 PTCH2Q9Y6C5 1203 aa26.63■■□□□ 1.85
HLA-F-228ENST00000486194 BCRP11274 1271 aa26.62■■□□□ 1.85
HLA-F-228ENST00000486194 PSMC4P43686 418 aa26.62■■□□□ 1.85
HLA-F-228ENST00000486194 RRP1BQ14684 758 aaKnown RBP26.62■■□□□ 1.85
HLA-F-228ENST00000486194 WDR18Q9BV38 432 aa26.62■■□□□ 1.85
HLA-F-228ENST00000486194 CRNKL1Q9BZJ0 848 aaKnown RBP26.62■■□□□ 1.85
HLA-F-228ENST00000486194 EHD4Q9H223 541 aa26.62■■□□□ 1.85
HLA-F-228ENST00000486194 BOLA2Q9H3K6 86 aa26.62■■□□□ 1.85
HLA-F-228ENST00000486194 PHIPQ8WWQ0 1821 aa26.62■■□□□ 1.85
HLA-F-228ENST00000486194 CDK5RAP2Q96SN8 1893 aa26.62■■□□□ 1.85
HLA-F-228ENST00000486194 FMNL1O95466 1100 aaPredicted RBP26.61■■□□□ 1.85
HLA-F-228ENST00000486194 HAUS7Q99871 368 aa26.61■■□□□ 1.85
HLA-F-228ENST00000486194 SERPINB13Q9UIV8 391 aa26.61■■□□□ 1.85
HLA-F-228ENST00000486194 ZNF532Q9HCE3 1301 aa26.61■■□□□ 1.85
HLA-F-228ENST00000486194 HMGCS2P54868 508 aa26.6■■□□□ 1.85
HLA-F-228ENST00000486194 FCGRTP55899 365 aa26.6■■□□□ 1.85
HLA-F-228ENST00000486194 SH3D19Q5HYK7 790 aa26.6■■□□□ 1.85
HLA-F-228ENST00000486194 DCTPP1Q9H773 170 aa26.6■■□□□ 1.85
HLA-F-228ENST00000486194 SIPA1L1O43166 1804 aa26.6■■□□□ 1.85
HLA-F-228ENST00000486194 TRIM47Q96LD4 638 aa26.59■■□□□ 1.85
HLA-F-228ENST00000486194 SRRDQ9UH36 339 aa26.59■■□□□ 1.85
HLA-F-228ENST00000486194 PTPRFP10586 1907 aa26.59■■□□□ 1.85
HLA-F-228ENST00000486194 ATAD5Q96QE3 1844 aa26.58■■□□□ 1.85
HLA-F-228ENST00000486194 C19orf81C9J6K1 198 aa26.58■■□□□ 1.85
HLA-F-228ENST00000486194 SLC4A8Q2Y0W8 1093 aa26.58■■□□□ 1.85
HLA-F-228ENST00000486194 TREML2Q5T2D2 321 aa26.58■■□□□ 1.85
HLA-F-228ENST00000486194 GPATCH3Q96I76 525 aa26.58■■□□□ 1.85
HLA-F-228ENST00000486194 TMOD4Q9NZQ9 345 aa26.58■■□□□ 1.85
HLA-F-228ENST00000486194 ZBTB21Q9ULJ3 1066 aa26.58■■□□□ 1.85
HLA-F-228ENST00000486194 TCRBV5S4A2TA0A5A2 114 aa26.57■■□□□ 1.84
HLA-F-228ENST00000486194 SMARCA5O60264 1052 aaPredicted RBP26.57■■□□□ 1.84
HLA-F-228ENST00000486194 GDF11O95390 407 aa26.57■■□□□ 1.84
HLA-F-228ENST00000486194 POLR3DP05423 398 aaPredicted RBP26.57■■□□□ 1.84
HLA-F-228ENST00000486194 OSBPP22059 807 aa26.57■■□□□ 1.84
HLA-F-228ENST00000486194 RRP1P56182 461 aaKnown RBP26.57■■□□□ 1.84
HLA-F-228ENST00000486194 BACE1P56817 501 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms