RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 SOCS4Q8WXH5 440 aa12.27□□□□□ -0.45
PTPN7-213ENST00000486116 USP6NLQ92738 828 aa12.27□□□□□ -0.45
PTPN7-213ENST00000486116 NUDT12Q9BQG2 462 aa12.27□□□□□ -0.45
PTPN7-213ENST00000486116 ASCC2Q9H1I8 757 aaPredicted RBP12.27□□□□□ -0.45
PTPN7-213ENST00000486116 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
PTPN7-213ENST00000486116 PRDM5Q9NQX1 630 aaPredicted RBP12.27□□□□□ -0.45
PTPN7-213ENST00000486116 RFX7Q2KHR2 1363 aa12.27□□□□□ -0.45
PTPN7-213ENST00000486116 CTNND1O60716 968 aaKnown RBP12.26□□□□□ -0.45
PTPN7-213ENST00000486116 DNAJB2P25686 324 aa12.26□□□□□ -0.45
PTPN7-213ENST00000486116 EPHB4P54760 987 aa12.26□□□□□ -0.45
PTPN7-213ENST00000486116 MAP3K10Q02779 954 aa12.26□□□□□ -0.45
PTPN7-213ENST00000486116 PDE3AQ14432 1141 aa12.26□□□□□ -0.45
PTPN7-213ENST00000486116 SH3RF1Q7Z6J0 888 aa12.26□□□□□ -0.45
PTPN7-213ENST00000486116 ALYREFQ86V81 257 aaKnown RBP12.26□□□□□ -0.45
PTPN7-213ENST00000486116 DNAAF4Q8WXU2 420 aa12.26□□□□□ -0.45
PTPN7-213ENST00000486116 RNPC3Q96LT9 517 aaKnown RBP12.26□□□□□ -0.45
PTPN7-213ENST00000486116 ZNF576Q9H609 170 aa12.26□□□□□ -0.45
PTPN7-213ENST00000486116 PDLIM7Q9NR12 457 aa12.26□□□□□ -0.45
PTPN7-213ENST00000486116 LRRFIP2Q9Y608 721 aaKnown RBP12.26□□□□□ -0.45
PTPN7-213ENST00000486116 XIRP2A4UGR9 3374 aa12.26□□□□□ -0.45
PTPN7-213ENST00000486116 TRIM43BA6NCK2 446 aa12.25□□□□□ -0.45
PTPN7-213ENST00000486116 DNM1LO00429 736 aa12.25□□□□□ -0.45
PTPN7-213ENST00000486116 TRIM43Q96BQ3 446 aaPredicted RBP12.25□□□□□ -0.45
PTPN7-213ENST00000486116 STK31Q9BXU1 1019 aa12.25□□□□□ -0.45
PTPN7-213ENST00000486116 CHMP4AQ9BY43 222 aa12.25□□□□□ -0.45
PTPN7-213ENST00000486116 TXNRD2Q9NNW7 524 aa12.25□□□□□ -0.45
PTPN7-213ENST00000486116 ITGB8P26012 769 aa12.24□□□□□ -0.45
PTPN7-213ENST00000486116 RGS3P49796 1198 aa12.24□□□□□ -0.45
PTPN7-213ENST00000486116 HMGCS2P54868 508 aa12.24□□□□□ -0.45
PTPN7-213ENST00000486116 FLIIQ13045 1269 aa12.24□□□□□ -0.45
PTPN7-213ENST00000486116 TRIM60Q495X7 471 aa12.24□□□□□ -0.45
PTPN7-213ENST00000486116 CAVIN4Q5BKX8 364 aa12.24□□□□□ -0.45
PTPN7-213ENST00000486116 MORN1Q5T089 497 aa12.24□□□□□ -0.45
PTPN7-213ENST00000486116 AKNAD1Q5T1N1 836 aa12.24□□□□□ -0.45
PTPN7-213ENST00000486116 EPHX3Q9H6B9 360 aa12.24□□□□□ -0.45
PTPN7-213ENST00000486116 USP40Q9NVE5 1235 aa12.24□□□□□ -0.45
PTPN7-213ENST00000486116 DDX20Q9UHI6 824 aaKnown RBP12.24□□□□□ -0.45
PTPN7-213ENST00000486116 MROH5Q6ZUA9 1318 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 DDTLA6NHG4 134 aaPredicted RBP12.23□□□□□ -0.45
PTPN7-213ENST00000486116 SLC4A2P04920 1241 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 RGS2P41220 211 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 SPP2Q13103 211 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 PABPC4Q13310 644 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTPN7-213ENST00000486116 SNX17Q15036 470 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 SLC39A5Q6ZMH5 540 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 LPAR1Q92633 364 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 GAS2L1Q99501 681 aaPredicted RBP12.23□□□□□ -0.45
PTPN7-213ENST00000486116 APBA2Q99767 749 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 FLRT1Q9NZU1 646 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 SIPA1L1O43166 1804 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 LRRC37A2A6NM11 1700 aa12.23□□□□□ -0.45
PTPN7-213ENST00000486116 ENTPD3O75355 529 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 BMP1P13497 986 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 PRDX5P30044 214 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 FKBP5Q13451 457 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-213ENST00000486116 ADGRE1Q14246 886 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 CCDC85BQ15834 202 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-213ENST00000486116 GJC2Q5T442 439 aaPredicted RBP12.22□□□□□ -0.45
PTPN7-213ENST00000486116 GPR142Q7Z601 462 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 VGLL2Q8N8G2 317 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 TIFAQ96CG3 184 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 IDI2Q9BXS1 227 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 PORCNQ9H237 461 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 PRDM12Q9H4Q4 367 aa12.22□□□□□ -0.45
PTPN7-213ENST00000486116 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.21□□□□□ -0.45
PTPN7-213ENST00000486116 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.21□□□□□ -0.45
PTPN7-213ENST00000486116 Q3C1V9 767 aa12.21□□□□□ -0.45
PTPN7-213ENST00000486116 SH3D19Q5HYK7 790 aa12.21□□□□□ -0.45
PTPN7-213ENST00000486116 ZSCAN29Q8IWY8 852 aaPredicted RBP12.21□□□□□ -0.45
PTPN7-213ENST00000486116 ZNF280CQ8ND82 737 aa12.21□□□□□ -0.45
PTPN7-213ENST00000486116 GPRC5AQ8NFJ5 357 aa12.21□□□□□ -0.45
PTPN7-213ENST00000486116 P2RX7Q99572 595 aaKnown RBP12.21□□□□□ -0.45
PTPN7-213ENST00000486116 UTYO14607 1347 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 CHD7Q9P2D1 2997 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 FAM196BA6NMK8 535 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 MAPK4P31152 587 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 CALD1Q05682 793 aaKnown RBP12.2□□□□□ -0.46
PTPN7-213ENST00000486116 LRRC24Q50LG9 513 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 TMEM31Q5JXX7 168 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 BEND3Q5T5X7 828 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 TRPV1Q8NER1 839 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 CCER1Q8TC90 406 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-213ENST00000486116 C11orf16Q9NQ32 467 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 DDX4Q9NQI0 724 aaKnown RBP12.2□□□□□ -0.46
PTPN7-213ENST00000486116 RBPJLQ9UBG7 517 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 ADAMTS8Q9UP79 889 aa12.2□□□□□ -0.46
PTPN7-213ENST00000486116 KIF16BQ96L93 1317 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 GRM8O00222 908 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 MSCO60682 206 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 PDE8BO95263 885 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 CNGA1P29973 690 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 PBX2P40425 430 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 HERVK_113P62684 666 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 ERVK-9P63128 1117 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 ERVK-24P63145 666 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 IRX3P78415 501 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-213ENST00000486116 MAP2K5Q13163 448 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 RRP1BQ14684 758 aaKnown RBP12.19□□□□□ -0.46
PTPN7-213ENST00000486116 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms