RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 PCDH10Q9P2E7 1040 aa16.83■□□□□ 0.28
SCAF4-206ENST00000485790 HSP90AB4PQ58FF6 505 aa16.82■□□□□ 0.28
SCAF4-206ENST00000485790 CERS3Q8IU89 383 aa16.82■□□□□ 0.28
SCAF4-206ENST00000485790 ERC1Q8IUD2 1116 aa16.82■□□□□ 0.28
SCAF4-206ENST00000485790 PROCA1Q8NCQ7 364 aaPredicted RBP16.82■□□□□ 0.28
SCAF4-206ENST00000485790 SH3RF3Q8TEJ3 882 aaPredicted RBP16.82■□□□□ 0.28
SCAF4-206ENST00000485790 AATFQ9NY61 560 aaKnown RBP eCLIP16.82■□□□□ 0.284e-6■□□□□ 10.1
SCAF4-206ENST00000485790 AGTPBP1Q9UPW5 1226 aa16.82■□□□□ 0.28
SCAF4-206ENST00000485790 ARAP2Q8WZ64 1704 aa16.82■□□□□ 0.28
SCAF4-206ENST00000485790 PDE4DIPQ5VU43 2346 aa16.81■□□□□ 0.28
SCAF4-206ENST00000485790 ADGRA2Q96PE1 1338 aa16.81■□□□□ 0.28
SCAF4-206ENST00000485790 TNPO2O14787 897 aaKnown RBP16.81■□□□□ 0.28
SCAF4-206ENST00000485790 CAPN2P17655 700 aa16.81■□□□□ 0.28
SCAF4-206ENST00000485790 TMED8Q6PL24 325 aaPredicted RBP16.81■□□□□ 0.28
SCAF4-206ENST00000485790 CRACR2BQ8N4Y2 399 aaPredicted RBP16.81■□□□□ 0.28
SCAF4-206ENST00000485790 SLAIN1Q8ND83 568 aa16.81■□□□□ 0.28
SCAF4-206ENST00000485790 TGFBRAP1Q8WUH2 860 aa16.81■□□□□ 0.28
SCAF4-206ENST00000485790 COA7Q96BR5 231 aa16.81■□□□□ 0.28
SCAF4-206ENST00000485790 C1orf115Q9H7X2 142 aa16.81■□□□□ 0.28
SCAF4-206ENST00000485790 GINM1Q9NU53 330 aa16.81■□□□□ 0.28
SCAF4-206ENST00000485790 CYP2E1P05181 493 aaPredicted RBP16.8■□□□□ 0.28
SCAF4-206ENST00000485790 ASNSP08243 561 aa16.8■□□□□ 0.28
SCAF4-206ENST00000485790 CTGFP29279 349 aa16.8■□□□□ 0.28
SCAF4-206ENST00000485790 GCLCP48506 637 aaPredicted RBP16.8■□□□□ 0.28
SCAF4-206ENST00000485790 CCDC8Q9H0W5 538 aaPredicted RBP16.8■□□□□ 0.28
SCAF4-206ENST00000485790 RNF208Q9H0X6 261 aa16.8■□□□□ 0.28
SCAF4-206ENST00000485790 RFX7Q2KHR2 1363 aa16.79■□□□□ 0.28
SCAF4-206ENST00000485790 FAM196BA6NMK8 535 aa16.79■□□□□ 0.28
SCAF4-206ENST00000485790 HLA-DOAP06340 250 aa16.79■□□□□ 0.28
SCAF4-206ENST00000485790 GJB1P08034 283 aa16.79■□□□□ 0.28
SCAF4-206ENST00000485790 SLURP2P0DP57 97 aa16.79■□□□□ 0.28
SCAF4-206ENST00000485790 CYP7A1P22680 504 aa16.79■□□□□ 0.28
SCAF4-206ENST00000485790 ZAP70P43403 619 aa16.79■□□□□ 0.28
SCAF4-206ENST00000485790 PRKCZQ05513 592 aa16.79■□□□□ 0.28
SCAF4-206ENST00000485790 CHMP4BQ9H444 224 aaKnown RBP16.79■□□□□ 0.28
SCAF4-206ENST00000485790 TMOD4Q9NZQ9 345 aa16.79■□□□□ 0.28
SCAF4-206ENST00000485790 C19orf81C9J6K1 198 aa16.78■□□□□ 0.28
SCAF4-206ENST00000485790 ADCY3O60266 1144 aa16.78■□□□□ 0.28
SCAF4-206ENST00000485790 IDH1O75874 414 aaKnown RBP16.78■□□□□ 0.28
SCAF4-206ENST00000485790 CCL5P13501 91 aa16.78■□□□□ 0.28
SCAF4-206ENST00000485790 FLT3LGP49771 235 aa16.78■□□□□ 0.28
SCAF4-206ENST00000485790 MAP3K12Q12852 859 aa16.78■□□□□ 0.28
SCAF4-206ENST00000485790 MTFR1Q15390 333 aa16.78■□□□□ 0.28
SCAF4-206ENST00000485790 MAPKAPK5Q8IW41 473 aa16.78■□□□□ 0.28
SCAF4-206ENST00000485790 ANKRD13CQ8N6S4 541 aa16.78■□□□□ 0.28
SCAF4-206ENST00000485790 PXYLP1Q8TE99 480 aa16.78■□□□□ 0.28
SCAF4-206ENST00000485790 EAF2Q96CJ1 260 aaPredicted RBP16.78■□□□□ 0.28
SCAF4-206ENST00000485790 WDR18Q9BV38 432 aa16.78■□□□□ 0.28
SCAF4-206ENST00000485790 HMGCS2P54868 508 aa16.77■□□□□ 0.28
SCAF4-206ENST00000485790 IRF5Q13568 498 aa16.77■□□□□ 0.28
SCAF4-206ENST00000485790 DPF3Q92784 378 aa16.77■□□□□ 0.28
SCAF4-206ENST00000485790 DBNLQ9UJU6 430 aaKnown RBP16.77■□□□□ 0.28
SCAF4-206ENST00000485790 PALD1Q9ULE6 856 aa16.77■□□□□ 0.28
SCAF4-206ENST00000485790 HTTP42858 3142 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 RLBP1P12271 317 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 USP5P45974 858 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 GJA8P48165 433 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 BACE1P56817 501 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 FAM110CQ1W6H9 321 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 SH3D19Q5HYK7 790 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 TREML2Q5T2D2 321 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 CEP85Q6P2H3 762 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 CCDC84Q86UT8 332 aaPredicted RBP16.76■□□□□ 0.27
SCAF4-206ENST00000485790 PIH1D3Q9NQM4 214 aaKnown RBP16.76■□□□□ 0.27
SCAF4-206ENST00000485790 TAOK2Q9UL54 1235 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 GABRQQ9UN88 632 aa16.76■□□□□ 0.27
SCAF4-206ENST00000485790 COL2A1P02458 1487 aaPredicted RBP16.75■□□□□ 0.27
SCAF4-206ENST00000485790 USP17L10C9JJH3 530 aa16.75■□□□□ 0.27
SCAF4-206ENST00000485790 HMMRO75330 724 aa16.75■□□□□ 0.27
SCAF4-206ENST00000485790 TFRCP02786 760 aaKnown RBP16.75■□□□□ 0.27
SCAF4-206ENST00000485790 IRX3P78415 501 aaPredicted RBP16.75■□□□□ 0.27
SCAF4-206ENST00000485790 TTF1Q15361 905 aaPredicted RBP16.75■□□□□ 0.27
SCAF4-206ENST00000485790 HABP4Q5JVS0 413 aaKnown RBP16.75■□□□□ 0.27
SCAF4-206ENST00000485790 TTC6Q86TZ1 520 aa16.75■□□□□ 0.27
SCAF4-206ENST00000485790 AACSQ86V21 672 aa16.75■□□□□ 0.27
SCAF4-206ENST00000485790 METTL16Q86W50 562 aaKnown RBP16.75■□□□□ 0.27
SCAF4-206ENST00000485790 CCAR1Q8IX12 1150 aaKnown RBP16.75■□□□□ 0.27
SCAF4-206ENST00000485790 RPAP2Q8IXW5 612 aaPredicted RBP16.75■□□□□ 0.27
SCAF4-206ENST00000485790 PANK1Q8TE04 598 aa16.75■□□□□ 0.27
SCAF4-206ENST00000485790 HTATIP2Q9BUP3 242 aa16.75■□□□□ 0.27
SCAF4-206ENST00000485790 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.75■□□□□ 0.27
SCAF4-206ENST00000485790 OTOFQ9HC10 1997 aa16.75■□□□□ 0.27
SCAF4-206ENST00000485790 FLT1P17948 1338 aa16.74■□□□□ 0.27
SCAF4-206ENST00000485790 ZBED9Q6R2W3 1325 aa16.74■□□□□ 0.27
SCAF4-206ENST00000485790 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
SCAF4-206ENST00000485790 MAGEB6Q8N7X4 407 aa16.74■□□□□ 0.27
SCAF4-206ENST00000485790 ASCC2Q9H1I8 757 aaPredicted RBP16.74■□□□□ 0.27
SCAF4-206ENST00000485790 SAP30BPQ9UHR5 308 aaKnown RBP16.74■□□□□ 0.27
SCAF4-206ENST00000485790 SGPL1O95470 568 aa16.73■□□□□ 0.27
SCAF4-206ENST00000485790 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
SCAF4-206ENST00000485790 RRP1BQ14684 758 aaKnown RBP16.73■□□□□ 0.27
SCAF4-206ENST00000485790 ADGRA1Q86SQ6 560 aa16.73■□□□□ 0.27
SCAF4-206ENST00000485790 GPRC5AQ8NFJ5 357 aa16.73■□□□□ 0.27
SCAF4-206ENST00000485790 U2AF1L4Q8WU68 220 aaKnown RBP16.73■□□□□ 0.27
SCAF4-206ENST00000485790 EXOC6BQ9Y2D4 811 aa16.73■□□□□ 0.27
SCAF4-206ENST00000485790 NR2E3Q9Y5X4 410 aa16.73■□□□□ 0.27
SCAF4-206ENST00000485790 LAMB1P07942 1786 aa16.73■□□□□ 0.27
SCAF4-206ENST00000485790 AK9Q5TCS8 1911 aa16.72■□□□□ 0.27
SCAF4-206ENST00000485790 IFIT2P09913 472 aaKnown RBP16.72■□□□□ 0.27
SCAF4-206ENST00000485790 ELNP15502 786 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms