RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.24■□□□□ 0.03
SSR4-210ENST00000485612 PTPRFP10586 1907 aa15.23■□□□□ 0.03
SSR4-210ENST00000485612 TMEM265A0A087WTH1 108 aa15.23■□□□□ 0.03
SSR4-210ENST00000485612 PDE8BO95263 885 aa15.23■□□□□ 0.03
SSR4-210ENST00000485612 XRCC5P13010 732 aaKnown RBP15.23■□□□□ 0.03
SSR4-210ENST00000485612 CCND3P30281 292 aaPredicted RBP15.23■□□□□ 0.03
SSR4-210ENST00000485612 SMAD3P84022 425 aaKnown RBP15.23■□□□□ 0.03
SSR4-210ENST00000485612 MAP3K10Q02779 954 aa15.23■□□□□ 0.03
SSR4-210ENST00000485612 PABPC4Q13310 644 aaKnown RBP eCLIP15.23■□□□□ 0.039e-9■■■■■ 34.3
SSR4-210ENST00000485612 ZSCAN29Q8IWY8 852 aaPredicted RBP15.23■□□□□ 0.03
SSR4-210ENST00000485612 TRMT44Q8IYL2 757 aaKnown RBP15.23■□□□□ 0.03
SSR4-210ENST00000485612 NUDT12Q9BQG2 462 aa15.23■□□□□ 0.03
SSR4-210ENST00000485612 ENTPD3O75355 529 aa15.22■□□□□ 0.03
SSR4-210ENST00000485612 SLURP2P0DP57 97 aa15.22■□□□□ 0.03
SSR4-210ENST00000485612 ZKSCAN1P17029 563 aaPredicted RBP15.22■□□□□ 0.03
SSR4-210ENST00000485612 RGS3P49796 1198 aa15.22■□□□□ 0.03
SSR4-210ENST00000485612 C9orf50Q5SZB4 431 aa15.22■□□□□ 0.03
SSR4-210ENST00000485612 SSH1Q8WYL5 1049 aa15.22■□□□□ 0.03
SSR4-210ENST00000485612 IFIT1P09914 478 aaKnown RBP15.21■□□□□ 0.03
SSR4-210ENST00000485612 ATN1P54259 1190 aaPredicted RBP15.21■□□□□ 0.03
SSR4-210ENST00000485612 SPP2Q13103 211 aa15.21■□□□□ 0.03
SSR4-210ENST00000485612 SH3BP5LQ7L8J4 393 aa15.21■□□□□ 0.03
SSR4-210ENST00000485612 SOCS4Q8WXH5 440 aa15.21■□□□□ 0.03
SSR4-210ENST00000485612 IDI2Q9BXS1 227 aa15.21■□□□□ 0.03
SSR4-210ENST00000485612 USP44Q9H0E7 712 aa15.21■□□□□ 0.03
SSR4-210ENST00000485612 ASCC2Q9H1I8 757 aaPredicted RBP15.21■□□□□ 0.03
SSR4-210ENST00000485612 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.03
SSR4-210ENST00000485612 CDH23Q9H251 3354 aa15.21■□□□□ 0.03
SSR4-210ENST00000485612 PHIPQ8WWQ0 1821 aa15.2■□□□□ 0.02
SSR4-210ENST00000485612 DNAH12Q6ZR08 3092 aa15.2■□□□□ 0.02
SSR4-210ENST00000485612 DDTLA6NHG4 134 aaPredicted RBP15.2■□□□□ 0.02
SSR4-210ENST00000485612 PTPRCP08575 1304 aa15.19■□□□□ 0.02
SSR4-210ENST00000485612 FGFR2P21802 821 aa15.19■□□□□ 0.02
SSR4-210ENST00000485612 PRDX5P30044 214 aa15.19■□□□□ 0.02
SSR4-210ENST00000485612 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
SSR4-210ENST00000485612 RFX5P48382 616 aaPredicted RBP15.19■□□□□ 0.02
SSR4-210ENST00000485612 HMGCS2P54868 508 aa15.19■□□□□ 0.02
SSR4-210ENST00000485612 MAP3K12Q12852 859 aa15.19■□□□□ 0.02
SSR4-210ENST00000485612 PDE3AQ14432 1141 aa15.19■□□□□ 0.02
SSR4-210ENST00000485612 USP38Q8NB14 1042 aa15.19■□□□□ 0.02
SSR4-210ENST00000485612 ZNF280CQ8ND82 737 aa15.19■□□□□ 0.02
SSR4-210ENST00000485612 ATAD5Q96QE3 1844 aa15.19■□□□□ 0.02
SSR4-210ENST00000485612 KIF16BQ96L93 1317 aa15.18■□□□□ 0.02
SSR4-210ENST00000485612 LDHBP07195 334 aaKnown RBP15.18■□□□□ 0.02
SSR4-210ENST00000485612 RTP1P59025 263 aa15.18■□□□□ 0.02
SSR4-210ENST00000485612 PUM3Q15397 648 aaKnown RBP15.18■□□□□ 0.02
SSR4-210ENST00000485612 CCL14Q16627 93 aa15.18■□□□□ 0.02
SSR4-210ENST00000485612 GPRC5AQ8NFJ5 357 aa15.18■□□□□ 0.02
SSR4-210ENST00000485612 CDCA7LQ96GN5 454 aa15.18■□□□□ 0.02
SSR4-210ENST00000485612 MYO5AQ9Y4I1 1855 aaKnown RBP15.18■□□□□ 0.02
SSR4-210ENST00000485612 PLXNB2O15031 1838 aa15.17■□□□□ 0.02
SSR4-210ENST00000485612 DOCK1Q14185 1865 aa15.17■□□□□ 0.02
SSR4-210ENST00000485612 RGS2P41220 211 aa15.17■□□□□ 0.02
SSR4-210ENST00000485612 SLFN5Q08AF3 891 aa15.17■□□□□ 0.02
SSR4-210ENST00000485612 USP6NLQ92738 828 aa15.17■□□□□ 0.02
SSR4-210ENST00000485612 BADQ92934 168 aa15.17■□□□□ 0.02
SSR4-210ENST00000485612 TBC1D2Q9BYX2 928 aa15.17■□□□□ 0.02
SSR4-210ENST00000485612 ATP11BQ9Y2G3 1177 aa15.17■□□□□ 0.02
SSR4-210ENST00000485612 CDK5RAP2Q96SN8 1893 aa15.16■□□□□ 0.02
SSR4-210ENST00000485612 TTC28Q96AY4 2481 aa15.16■□□□□ 0.02
SSR4-210ENST00000485612 E9PSI1 815 aa15.16■□□□□ 0.02
SSR4-210ENST00000485612 TBC1D12O60347 775 aa15.16■□□□□ 0.02
SSR4-210ENST00000485612 PEX10O60683 326 aa15.16■□□□□ 0.02
SSR4-210ENST00000485612 MAPK4P31152 587 aa15.16■□□□□ 0.02
SSR4-210ENST00000485612 IRX3P78415 501 aaPredicted RBP15.16■□□□□ 0.02
SSR4-210ENST00000485612 GRIN2CQ14957 1233 aa15.16■□□□□ 0.02
SSR4-210ENST00000485612 CCAR1Q8IX12 1150 aaKnown RBP15.16■□□□□ 0.02
SSR4-210ENST00000485612 OSBPL5Q9H0X9 879 aaPredicted RBP15.16■□□□□ 0.02
SSR4-210ENST00000485612 PRDM5Q9NQX1 630 aaPredicted RBP15.16■□□□□ 0.02
SSR4-210ENST00000485612 EYA2O00167 538 aa15.15■□□□□ 0.02
SSR4-210ENST00000485612 SLC5A1P13866 664 aa15.15■□□□□ 0.02
SSR4-210ENST00000485612 PICALMQ13492 652 aa15.15■□□□□ 0.02
SSR4-210ENST00000485612 SH3D19Q5HYK7 790 aa15.15■□□□□ 0.02
SSR4-210ENST00000485612 MORN1Q5T089 497 aa15.15■□□□□ 0.02
SSR4-210ENST00000485612 ATG9AQ7Z3C6 839 aa15.15■□□□□ 0.02
SSR4-210ENST00000485612 ATXN2LQ8WWM7 1075 aaKnown RBP15.15■□□□□ 0.02
SSR4-210ENST00000485612 LPAR1Q92633 364 aa15.15■□□□□ 0.02
SSR4-210ENST00000485612 P2RX7Q99572 595 aaKnown RBP15.15■□□□□ 0.02
SSR4-210ENST00000485612 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.15■□□□□ 0.02
SSR4-210ENST00000485612 TXNRD2Q9NNW7 524 aa15.15■□□□□ 0.02
SSR4-210ENST00000485612 DDX4Q9NQI0 724 aaKnown RBP15.15■□□□□ 0.02
SSR4-210ENST00000485612 DDX20Q9UHI6 824 aaKnown RBP15.15■□□□□ 0.02
SSR4-210ENST00000485612 DNM1LO00429 736 aa15.14■□□□□ 0.01
SSR4-210ENST00000485612 GPR142Q7Z601 462 aa15.14■□□□□ 0.01
SSR4-210ENST00000485612 PLEKHH3Q7Z736 793 aa15.14■□□□□ 0.01
SSR4-210ENST00000485612 LPIN2Q92539 896 aa15.14■□□□□ 0.01
SSR4-210ENST00000485612 APBA2Q99767 749 aa15.14■□□□□ 0.01
SSR4-210ENST00000485612 SIL1Q9H173 461 aa15.14■□□□□ 0.01
SSR4-210ENST00000485612 SMC4Q9NTJ3 1288 aa15.14■□□□□ 0.01
SSR4-210ENST00000485612 FAM196BA6NMK8 535 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 USP17L5A8MUK1 530 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 CNGA1P29973 690 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 HOXA7P31268 230 aaPredicted RBP15.13■□□□□ 0.01
SSR4-210ENST00000485612 HERVK_113P62684 666 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 Q3C1V9 767 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 MFSD14CQ5VZR4 134 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 ADAMTS19Q8TE59 1207 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 ASB2Q96Q27 587 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 PORCNQ9H237 461 aa15.13■□□□□ 0.01
SSR4-210ENST00000485612 AS3MTQ9HBK9 375 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms