RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 HLA-DOAP06340 250 aa21.41■■□□□ 1.02
SREBF1-213ENST00000485080 GJA5P36382 358 aa21.41■■□□□ 1.02
SREBF1-213ENST00000485080 OSBP2Q969R2 916 aa21.41■■□□□ 1.02
SREBF1-213ENST00000485080 OPTNQ96CV9 577 aa21.41■■□□□ 1.02
SREBF1-213ENST00000485080 STRBPQ96SI9 672 aaKnown RBP21.41■■□□□ 1.02
SREBF1-213ENST00000485080 FSD1Q9BTV5 496 aa21.41■■□□□ 1.02
SREBF1-213ENST00000485080 DCP1AQ9NPI6 582 aaPredicted RBP21.41■■□□□ 1.02
SREBF1-213ENST00000485080 MYH1P12882 1939 aa21.41■■□□□ 1.02
SREBF1-213ENST00000485080 TESPA1A2RU30 521 aaPredicted RBP21.4■■□□□ 1.02
SREBF1-213ENST00000485080 PDE4AP27815 886 aa21.4■■□□□ 1.02
SREBF1-213ENST00000485080 PPATQ06203 517 aa21.4■■□□□ 1.02
SREBF1-213ENST00000485080 SREBF2Q12772 1141 aa21.4■■□□□ 1.02
SREBF1-213ENST00000485080 PPIL2Q13356 520 aa21.4■■□□□ 1.02
SREBF1-213ENST00000485080 ZMYM1Q5SVZ6 1142 aa21.4■■□□□ 1.02
SREBF1-213ENST00000485080 TTC6Q86TZ1 520 aa21.4■■□□□ 1.02
SREBF1-213ENST00000485080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.4■■□□□ 1.02
SREBF1-213ENST00000485080 SIPA1L1O43166 1804 aa21.4■■□□□ 1.02
SREBF1-213ENST00000485080 DDX60LQ5H9U9 1706 aaKnown RBP21.4■■□□□ 1.02
SREBF1-213ENST00000485080 GIMAP6Q6P9H5 292 aa21.39■■□□□ 1.01
SREBF1-213ENST00000485080 CENPQQ7L2Z9 268 aaPredicted RBP21.39■■□□□ 1.01
SREBF1-213ENST00000485080 SCYL3Q8IZE3 742 aa21.39■■□□□ 1.01
SREBF1-213ENST00000485080 BEGAINQ9BUH8 593 aa21.39■■□□□ 1.01
SREBF1-213ENST00000485080 SAGE1Q9NXZ1 904 aa21.39■■□□□ 1.01
SREBF1-213ENST00000485080 SAP30BPQ9UHR5 308 aaKnown RBP21.39■■□□□ 1.01
SREBF1-213ENST00000485080 SDR42E1Q8WUS8 393 aa21.38■■□□□ 1.01
SREBF1-213ENST00000485080 MS4A4AQ96JQ5 239 aa21.38■■□□□ 1.01
SREBF1-213ENST00000485080 DNAJC18Q9H819 358 aa21.38■■□□□ 1.01
SREBF1-213ENST00000485080 GINM1Q9NU53 330 aa21.38■■□□□ 1.01
SREBF1-213ENST00000485080 SERPINB13Q9UIV8 391 aa21.38■■□□□ 1.01
SREBF1-213ENST00000485080 NEFLP07196 543 aa21.37■■□□□ 1.01
SREBF1-213ENST00000485080 SLURP2P0DP57 97 aa21.37■■□□□ 1.01
SREBF1-213ENST00000485080 GNAT2P19087 354 aa21.37■■□□□ 1.01
SREBF1-213ENST00000485080 ERICH6BQ5W0A0 696 aa21.37■■□□□ 1.01
SREBF1-213ENST00000485080 CNKSR2Q8WXI2 1034 aa21.37■■□□□ 1.01
SREBF1-213ENST00000485080 MCM9Q9NXL9 1143 aa21.37■■□□□ 1.01
SREBF1-213ENST00000485080 FOXN1O15353 648 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 GPAA1O43292 621 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 PRKAB2O43741 272 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 CAP2P40123 477 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 CTCFP49711 727 aaPredicted RBP21.36■■□□□ 1.01
SREBF1-213ENST00000485080 GTF2A2P52657 109 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 GABPAQ06546 454 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 MKRN3Q13064 507 aaKnown RBP21.36■■□□□ 1.01
SREBF1-213ENST00000485080 TATDN1Q6P1N9 297 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 OTUD5Q96G74 571 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 PICK1Q9NRD5 415 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 KCNH4Q9UQ05 1017 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 SLC4A4Q9Y6R1 1079 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 NAV1Q8NEY1 1877 aa21.36■■□□□ 1.01
SREBF1-213ENST00000485080 FAM196BA6NMK8 535 aa21.35■■□□□ 1.01
SREBF1-213ENST00000485080 M0R2C6 588 aa21.35■■□□□ 1.01
SREBF1-213ENST00000485080 IRF6O14896 467 aa21.35■■□□□ 1.01
SREBF1-213ENST00000485080 PTPRAP18433 802 aa21.35■■□□□ 1.01
SREBF1-213ENST00000485080 PLCD1P51178 756 aa21.35■■□□□ 1.01
SREBF1-213ENST00000485080 CRACR2BQ8N4Y2 399 aaPredicted RBP21.35■■□□□ 1.01
SREBF1-213ENST00000485080 DDRGK1Q96HY6 314 aa21.35■■□□□ 1.01
SREBF1-213ENST00000485080 CFHR5Q9BXR6 569 aa21.35■■□□□ 1.01
SREBF1-213ENST00000485080 TBC1D2Q9BYX2 928 aa21.35■■□□□ 1.01
SREBF1-213ENST00000485080 HELLSQ9NRZ9 838 aa21.35■■□□□ 1.01
SREBF1-213ENST00000485080 GSG1L2A8MUP6 293 aa21.34■■□□□ 1.01
SREBF1-213ENST00000485080 TRIM6-TRIM34B2RNG4 842 aa21.34■■□□□ 1.01
SREBF1-213ENST00000485080 CXCL11O14625 94 aa21.34■■□□□ 1.01
SREBF1-213ENST00000485080 ALDH1A1P00352 501 aa21.34■■□□□ 1.01
SREBF1-213ENST00000485080 POLR3DP05423 398 aaPredicted RBP21.34■■□□□ 1.01
SREBF1-213ENST00000485080 SNAPC2Q13487 334 aa21.34■■□□□ 1.01
SREBF1-213ENST00000485080 RRP1BQ14684 758 aaKnown RBP21.34■■□□□ 1.01
SREBF1-213ENST00000485080 TRIM34Q9BYJ4 488 aa21.34■■□□□ 1.01
SREBF1-213ENST00000485080 RNF186Q9NXI6 227 aa21.34■■□□□ 1.01
SREBF1-213ENST00000485080 DOCK1Q14185 1865 aa21.34■■□□□ 1.01
SREBF1-213ENST00000485080 SBK1Q52WX2 424 aa21.33■■□□□ 1.01
SREBF1-213ENST00000485080 C12orf60Q5U649 245 aa21.33■■□□□ 1.01
SREBF1-213ENST00000485080 IFNL1Q8IU54 200 aa21.33■■□□□ 1.01
SREBF1-213ENST00000485080 PATL2C9JE40 543 aaKnown RBP21.32■■□□□ 1
SREBF1-213ENST00000485080 ASNSP08243 561 aa21.32■■□□□ 1
SREBF1-213ENST00000485080 HSPA8P11142 646 aaKnown RBP21.32■■□□□ 1
SREBF1-213ENST00000485080 CETPP11597 493 aa21.32■■□□□ 1
SREBF1-213ENST00000485080 TTC22Q5TAA0 569 aa21.32■■□□□ 1
SREBF1-213ENST00000485080 BRI3BPQ8WY22 251 aa21.32■■□□□ 1
SREBF1-213ENST00000485080 SEC62Q99442 399 aaKnown RBP21.32■■□□□ 1
SREBF1-213ENST00000485080 ZCCHC17Q9NP64 241 aaKnown RBP21.32■■□□□ 1
SREBF1-213ENST00000485080 PRDM10Q9NQV6 1147 aa21.32■■□□□ 1
SREBF1-213ENST00000485080 SWAP70Q9UH65 585 aa21.32■■□□□ 1
SREBF1-213ENST00000485080 AFG3L2Q9Y4W6 797 aa21.32■■□□□ 1
SREBF1-213ENST00000485080 ZHX2Q9Y6X8 837 aa21.32■■□□□ 1
SREBF1-213ENST00000485080 BAZ2AQ9UIF9 1905 aaKnown RBP21.31■■□□□ 1
SREBF1-213ENST00000485080 USP17L12C9JPN9 530 aa21.31■■□□□ 1
SREBF1-213ENST00000485080 USP17L21D6R901 530 aa21.31■■□□□ 1
SREBF1-213ENST00000485080 SHMT1P34896 483 aa21.31■■□□□ 1
SREBF1-213ENST00000485080 NOM1Q5C9Z4 860 aaKnown RBP21.31■■□□□ 1
SREBF1-213ENST00000485080 OTUD7BQ6GQQ9 843 aa21.31■■□□□ 1
SREBF1-213ENST00000485080 AMOTL1Q8IY63 956 aa21.31■■□□□ 1
SREBF1-213ENST00000485080 RILPL2Q969X0 211 aa21.31■■□□□ 1
SREBF1-213ENST00000485080 PTPN18Q99952 460 aa21.31■■□□□ 1
SREBF1-213ENST00000485080 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.31■■□□□ 1
SREBF1-213ENST00000485080 ARPP21Q9UBL0 812 aaPredicted RBP21.31■■□□□ 1
SREBF1-213ENST00000485080 PHIPQ8WWQ0 1821 aa21.3■■□□□ 1
SREBF1-213ENST00000485080 CCL15-CCL14A0A0B4J2E2 113 aa21.3■■□□□ 1
SREBF1-213ENST00000485080 HIP1O00291 1037 aa21.3■■□□□ 1
SREBF1-213ENST00000485080 IGF2BP3O00425 579 aaKnown RBP eCLIP21.3■■□□□ 1
SREBF1-213ENST00000485080 SDSP20132 328 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms