RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 RNGTTO60942 597 aaKnown RBP6.04□□□□□ -1.44
VPS50-216ENST00000484954 EAPPQ56P03 285 aaPredicted RBP6.04□□□□□ -1.44
VPS50-216ENST00000484954 PPM1JQ5JR12 505 aa6.04□□□□□ -1.44
VPS50-216ENST00000484954 ACSBG1Q96GR2 724 aa6.04□□□□□ -1.44
VPS50-216ENST00000484954 FAM161BQ96MY7 647 aa6.04□□□□□ -1.44
VPS50-216ENST00000484954 EMILIN2Q9BXX0 1053 aa6.04□□□□□ -1.44
VPS50-216ENST00000484954 RC3H2Q9HBD1 1191 aaKnown RBP6.04□□□□□ -1.44
VPS50-216ENST00000484954 LEFTY1O75610 366 aa6.03□□□□□ -1.44
VPS50-216ENST00000484954 EIF4BP23588 611 aaKnown RBP6.03□□□□□ -1.44
VPS50-216ENST00000484954 MEI1Q5TIA1 1274 aa6.03□□□□□ -1.44
VPS50-216ENST00000484954 LLGL2Q6P1M3 1020 aa6.03□□□□□ -1.44
VPS50-216ENST00000484954 FBXO33Q7Z6M2 555 aa6.03□□□□□ -1.44
VPS50-216ENST00000484954 C12orf40Q86WS4 652 aa6.03□□□□□ -1.44
VPS50-216ENST00000484954 GZF1Q9H116 711 aaPredicted RBP6.03□□□□□ -1.44
VPS50-216ENST00000484954 PARP2Q9UGN5 583 aa6.03□□□□□ -1.44
VPS50-216ENST00000484954 AK5Q9Y6K8 562 aa6.03□□□□□ -1.44
VPS50-216ENST00000484954 RBAK-RBAKDNI3L0D1 243 aa6.02□□□□□ -1.45
VPS50-216ENST00000484954 TRIM37O94972 964 aa6.02□□□□□ -1.45
VPS50-216ENST00000484954 FAM87AP0C7U9 286 aa6.02□□□□□ -1.45
VPS50-216ENST00000484954 CDK8P49336 464 aa6.02□□□□□ -1.45
VPS50-216ENST00000484954 ERVK-24P63145 666 aa6.02□□□□□ -1.45
VPS50-216ENST00000484954 INPP5AQ14642 412 aa6.02□□□□□ -1.45
VPS50-216ENST00000484954 OGFOD3Q6PK18 319 aa6.02□□□□□ -1.45
VPS50-216ENST00000484954 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.02□□□□□ -1.45
VPS50-216ENST00000484954 GAL3ST3Q96A11 431 aa6.02□□□□□ -1.45
VPS50-216ENST00000484954 PCDHA4Q9UN74 947 aa6.02□□□□□ -1.45
VPS50-216ENST00000484954 CTSHP09668 335 aa6.01□□□□□ -1.45
VPS50-216ENST00000484954 RING1Q06587 406 aa6.01□□□□□ -1.45
VPS50-216ENST00000484954 LILRA6Q6PI73 481 aa6.01□□□□□ -1.45
VPS50-216ENST00000484954 ATG4DQ86TL0 474 aaPredicted RBP6.01□□□□□ -1.45
VPS50-216ENST00000484954 FAM181AQ8N9Y4 354 aa6.01□□□□□ -1.45
VPS50-216ENST00000484954 RNF214Q8ND24 703 aa6.01□□□□□ -1.45
VPS50-216ENST00000484954 TMEM40Q8WWA1 233 aa6.01□□□□□ -1.45
VPS50-216ENST00000484954 FRMD6Q96NE9 622 aa6.01□□□□□ -1.45
VPS50-216ENST00000484954 RNASE1P07998 156 aaKnown RBP6□□□□□ -1.45
VPS50-216ENST00000484954 CD96P40200 585 aa6□□□□□ -1.45
VPS50-216ENST00000484954 CYP27A1Q02318 531 aa6□□□□□ -1.45
VPS50-216ENST00000484954 CCDC85BQ15834 202 aaPredicted RBP6□□□□□ -1.45
VPS50-216ENST00000484954 MAP3K11Q16584 847 aa6□□□□□ -1.45
VPS50-216ENST00000484954 KRTAP19-4Q3LI73 84 aa6□□□□□ -1.45
VPS50-216ENST00000484954 TTBK2Q6IQ55 1244 aa6□□□□□ -1.45
VPS50-216ENST00000484954 LRFN4Q6PJG9 635 aa6□□□□□ -1.45
VPS50-216ENST00000484954 SV2BQ7L1I2 683 aa6□□□□□ -1.45
VPS50-216ENST00000484954 STK11IPQ8N1F8 1099 aa6□□□□□ -1.45
VPS50-216ENST00000484954 DUSP23Q9BVJ7 150 aa6□□□□□ -1.45
VPS50-216ENST00000484954 ADAMTS6Q9UKP5 1117 aa6□□□□□ -1.45
VPS50-216ENST00000484954 PCOLCE2Q9UKZ9 415 aa6□□□□□ -1.45
VPS50-216ENST00000484954 SAMM50Q9Y512 469 aa6□□□□□ -1.45
VPS50-216ENST00000484954 PCDHB5Q9Y5E4 795 aa6□□□□□ -1.45
VPS50-216ENST00000484954 NCANO14594 1321 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 PRRG2O14669 202 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 CD8BP10966 210 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 DAB2P98082 770 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 MESP2Q0VG99 397 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 SEPT6Q14141 434 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 LRRC14Q15048 493 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 ZBTB37Q5TC79 503 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS50-216ENST00000484954 TOP6BLQ8N6T0 577 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 FAM84AQ96KN4 292 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 SSU72Q9NP77 194 aaKnown RBP5.99□□□□□ -1.45
VPS50-216ENST00000484954 MBNL3Q9NUK0 354 aaKnown RBP5.99□□□□□ -1.45
VPS50-216ENST00000484954 CYP8B1Q9UNU6 501 aa5.99□□□□□ -1.45
VPS50-216ENST00000484954 B8ZZF3 427 aa5.98□□□□□ -1.45
VPS50-216ENST00000484954 F6X3S4 739 aa5.98□□□□□ -1.45
VPS50-216ENST00000484954 FUT4P22083 530 aa5.98□□□□□ -1.45
VPS50-216ENST00000484954 CFPP27918 469 aa5.98□□□□□ -1.45
VPS50-216ENST00000484954 BUD31P41223 144 aaPredicted RBP5.98□□□□□ -1.45
VPS50-216ENST00000484954 PSMD2Q13200 908 aa5.98□□□□□ -1.45
VPS50-216ENST00000484954 PLD6Q8N2A8 252 aaKnown RBP5.98□□□□□ -1.45
VPS50-216ENST00000484954 PLPPR2Q96GM1 343 aa5.98□□□□□ -1.45
VPS50-216ENST00000484954 PRAMEF27A3QJZ7 478 aa5.97□□□□□ -1.45
VPS50-216ENST00000484954 LRRC10BA6NIK2 292 aa5.97□□□□□ -1.45
VPS50-216ENST00000484954 LIG3P49916 1009 aa5.97□□□□□ -1.45
VPS50-216ENST00000484954 HNRNPUQ00839 825 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS50-216ENST00000484954 CCDC27Q2M243 656 aa5.97□□□□□ -1.45
VPS50-216ENST00000484954 TMC4Q7Z404 712 aa5.97□□□□□ -1.45
VPS50-216ENST00000484954 LRRN4CLQ8ND94 238 aa5.97□□□□□ -1.45
VPS50-216ENST00000484954 ELMO3Q96BJ8 720 aa5.97□□□□□ -1.45
VPS50-216ENST00000484954 FBRSQ9HAH7 460 aa5.97□□□□□ -1.45
VPS50-216ENST00000484954 TFE3P19532 575 aaPredicted RBP5.96□□□□□ -1.46
VPS50-216ENST00000484954 RAP1GAPP47736 663 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 MLANAQ16655 118 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 CYP27C1Q4G0S4 372 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 WIPI1Q5MNZ9 446 aaPredicted RBP5.96□□□□□ -1.46
VPS50-216ENST00000484954 AGMOQ6ZNB7 445 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 LCNL1Q6ZST4 164 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 CYFIP1Q7L576 1253 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 FAM214BQ7L5A3 538 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 CILP2Q8IUL8 1156 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 PI4K2BQ8TCG2 481 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 HEXIM2Q96MH2 286 aaKnown RBP5.96□□□□□ -1.46
VPS50-216ENST00000484954 TOX2Q96NM4 488 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 PICK1Q9NRD5 415 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.96□□□□□ -1.46
VPS50-216ENST00000484954 TLR6Q9Y2C9 796 aa5.96□□□□□ -1.46
VPS50-216ENST00000484954 FANCGO15287 622 aa5.95□□□□□ -1.46
VPS50-216ENST00000484954 NKG7Q16617 165 aa5.95□□□□□ -1.46
VPS50-216ENST00000484954 SCARA3Q6AZY7 606 aa5.95□□□□□ -1.46
VPS50-216ENST00000484954 PLAGL2Q9UPG8 496 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms