RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 TTLL5Q6EMB2 1281 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 SAPCD2Q86UD0 394 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 SLC51AQ86UW1 340 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 TRPM4Q8TD43 1214 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 GMLQ99445 158 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 C1QTNF2Q9BXJ5 285 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 API5Q9BZZ5 524 aaKnown RBP7.72□□□□□ -1.17
PTCD3-215ENST00000484203 MYOZ2Q9NPC6 264 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 PRDM10Q9NQV6 1147 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 CNNM1Q9NRU3 951 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 SMC4Q9NTJ3 1288 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 COL4A5P29400 1685 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 MROH5Q6ZUA9 1318 aa7.72□□□□□ -1.17
PTCD3-215ENST00000484203 J3QL48 77 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 IPO8O15397 1037 aaKnown RBP7.71□□□□□ -1.18
PTCD3-215ENST00000484203 NF2P35240 595 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 NR1H3Q13133 447 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 NOGQ13253 232 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 IRF5Q13568 498 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 UBE4AQ14139 1066 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 RABL6Q3YEC7 729 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-215ENST00000484203 DACT2Q5SW24 774 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 CST9Q5W186 159 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 USP48Q86UV5 1035 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 TRMT2AQ8IZ69 625 aaKnown RBP7.71□□□□□ -1.18
PTCD3-215ENST00000484203 SSH1Q8WYL5 1049 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 ARHGAP45Q92619 1136 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 CLUAP1Q96AJ1 413 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 SLC10A4Q96EP9 437 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 CAPNS2Q96L46 248 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 GPR101Q96P66 508 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-215ENST00000484203 GLIS2Q9BZE0 524 aaPredicted RBP7.71□□□□□ -1.18
PTCD3-215ENST00000484203 WASF2Q9Y6W5 498 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 DICER1Q9UPY3 1922 aaKnown RBP7.71□□□□□ -1.18
PTCD3-215ENST00000484203 KIF16BQ96L93 1317 aa7.71□□□□□ -1.18
PTCD3-215ENST00000484203 ANKRD36CQ5JPF3 1778 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 TRAF5O00463 557 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 MYO1BO43795 1136 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 SASH1O94885 1247 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 IL1R1P14778 569 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 SCARF1Q14162 830 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 CAVIN4Q5BKX8 364 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 VASH1Q7L8A9 365 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-215ENST00000484203 TRMT44Q8IYL2 757 aaKnown RBP7.7□□□□□ -1.18
PTCD3-215ENST00000484203 ZNF408Q9H9D4 720 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 GBA2Q9HCG7 927 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-215ENST00000484203 CD209Q9NNX6 404 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 KCNQ5Q9NR82 932 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 GGA3Q9NZ52 723 aa7.7□□□□□ -1.18
PTCD3-215ENST00000484203 DUOX1Q9NRD9 1551 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 NBPF7P0C2Y1 421 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-215ENST00000484203 SMPD1P17405 629 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 HUNKP57058 714 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 GTF2IP78347 998 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 VAC14Q08AM6 782 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 ANGEL2Q5VTE6 544 aaKnown RBP7.69□□□□□ -1.18
PTCD3-215ENST00000484203 VPS37DQ86XT2 251 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 APOBEC3FQ8IUX4 373 aaKnown RBP7.69□□□□□ -1.18
PTCD3-215ENST00000484203 TNS4Q8IZW8 715 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 TBC1D22AQ8WUA7 517 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 CDK15Q96Q40 435 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 PCDHB9Q9Y5E1 797 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 PPP2R3BQ9Y5P8 575 aa7.69□□□□□ -1.18
PTCD3-215ENST00000484203 UNCXA6NJT0 531 aa7.68□□□□□ -1.18
PTCD3-215ENST00000484203 UBTFL1P0CB47 393 aaPredicted RBP7.68□□□□□ -1.18
PTCD3-215ENST00000484203 HIBADHP31937 336 aaKnown RBP7.68□□□□□ -1.18
PTCD3-215ENST00000484203 DLGAP5Q15398 846 aa7.68□□□□□ -1.18
PTCD3-215ENST00000484203 CYP4F22Q6NT55 531 aa7.68□□□□□ -1.18
PTCD3-215ENST00000484203 RGMBQ6NW40 437 aa7.68□□□□□ -1.18
PTCD3-215ENST00000484203 SUCLG2Q96I99 432 aa7.68□□□□□ -1.18
PTCD3-215ENST00000484203 USP44Q9H0E7 712 aa7.68□□□□□ -1.18
PTCD3-215ENST00000484203 BICC1Q9H694 974 aaKnown RBP7.68□□□□□ -1.18
PTCD3-215ENST00000484203 CDV3Q9UKY7 258 aaKnown RBP7.68□□□□□ -1.18
PTCD3-215ENST00000484203 SUGT1Q9Y2Z0 365 aa7.68□□□□□ -1.18
PTCD3-215ENST00000484203 LRRC37AA6NMS7 1700 aa7.68□□□□□ -1.18
PTCD3-215ENST00000484203 ADAMTSL1Q8N6G6 1762 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 SHTN1A0MZ66 631 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 WNT10BO00744 389 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 FOXN1O15353 648 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 PLIN1O60240 522 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 FRAT2O75474 233 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-215ENST00000484203 TAF5LO75529 589 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 PDE8BO95263 885 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 ADH1CP00326 375 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 EGFRP00533 1210 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 GNAI3P08754 354 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 IFIT1P09914 478 aaKnown RBP7.67□□□□□ -1.18
PTCD3-215ENST00000484203 ZNF157P51786 506 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-215ENST00000484203 TNFAIP1Q13829 316 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 PUM3Q15397 648 aaKnown RBP7.67□□□□□ -1.18
PTCD3-215ENST00000484203 SUPT20HL1Q3ZLR7 823 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 METTL24Q5JXM2 366 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 EPHA10Q5JZY3 1008 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 COL13A1Q5TAT6 717 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-215ENST00000484203 DIEXFQ68CQ4 756 aaKnown RBP7.67□□□□□ -1.18
PTCD3-215ENST00000484203 TXNRD3Q86VQ6 643 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 CDCA5Q96FF9 252 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 SAGE1Q9NXZ1 904 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 SERPINA10Q9UK55 444 aa7.67□□□□□ -1.18
PTCD3-215ENST00000484203 RIPOR2Q9Y4F9 1068 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms