RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 MX2P20592 715 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 IL6STP40189 918 aaPredicted RBP8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 CTCFP49711 727 aaPredicted RBP8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 LRRC69Q6ZNQ3 347 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 NLRP8Q86W28 1048 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 ALDH16A1Q8IZ83 802 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 ABHD17AQ96GS6 310 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 MASTLQ96GX5 879 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 TEX13AQ9BXU3 409 aaPredicted RBP8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 PCGF6Q9BYE7 350 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 TAF1DQ9H5J8 278 aaPredicted RBP8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 PRDM10Q9NQV6 1147 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 ZNF541Q9H0D2 1346 aa8.04□□□□□ -1.12
SEMA3D-204ENST00000484038 GNAT3A8MTJ3 354 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 KHNYNO15037 678 aaKnown RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 U2SURPO15042 1029 aaKnown RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 ATXN7O15265 892 aaPredicted RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 CAMTA2O94983 1202 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 A1BGP04217 495 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 PIP4K2AP48426 406 aaPredicted RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 CNGB1Q14028 1251 aaPredicted RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 GAS6Q14393 721 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 CCDC93Q567U6 631 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 NBPF5PQ86XG9 351 aaPredicted RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 FMNL2Q96PY5 1086 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 ZCCHC2Q9C0B9 1178 aaKnown RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 MBIPQ9NS73 344 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 LBX1P52954 281 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 HIRAP54198 1017 aaPredicted RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 CC2D1BQ5T0F9 858 aaKnown RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 STAG2Q8N3U4 1231 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 IL17REQ8NFR9 667 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 ZNF277Q9NRM2 450 aaPredicted RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 HACL1Q9UJ83 578 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 ATXN7L1Q9ULK2 861 aaPredicted RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 NSFL1CQ9UNZ2 370 aaKnown RBP8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 PCDHGC4Q9Y5F7 938 aa8.03□□□□□ -1.12
SEMA3D-204ENST00000484038 RNF123Q5XPI4 1314 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 CLSPNQ9HAW4 1339 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 BTBD11A6QL63 1104 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 NPR1P16066 1061 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 WEE1P30291 646 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 EPHX2P34913 555 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 FKBP4Q02790 459 aaKnown RBP eCLIP8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 C1orf53Q5VUE5 145 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 OLFM4Q6UX06 510 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 ZSCAN1Q8NBB4 408 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 CFHR5Q9BXR6 569 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 ABT1Q9ULW3 272 aaKnown RBP8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 ZNF652Q9Y2D9 606 aa8.02□□□□□ -1.13
SEMA3D-204ENST00000484038 ADAMTSL1Q8N6G6 1762 aa8.01□□□□□ -1.13
SEMA3D-204ENST00000484038 FAM177BA6PVY3 158 aa8.01□□□□□ -1.13
SEMA3D-204ENST00000484038 KCNQ3O43525 872 aa8.01□□□□□ -1.13
SEMA3D-204ENST00000484038 BNIP3LO60238 219 aa8.01□□□□□ -1.13
SEMA3D-204ENST00000484038 FGFR3P22607 806 aa8.01□□□□□ -1.13
SEMA3D-204ENST00000484038 MAP1SQ66K74 1059 aaPredicted RBP8.01□□□□□ -1.13
SEMA3D-204ENST00000484038 HSH2DQ96JZ2 352 aa8.01□□□□□ -1.13
SEMA3D-204ENST00000484038 MKNK1Q9BUB5 465 aa8.01□□□□□ -1.13
SEMA3D-204ENST00000484038 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
SEMA3D-204ENST00000484038 COL3A1P02461 1466 aaPredicted RBP8.01□□□□□ -1.13
SEMA3D-204ENST00000484038 KIF7Q2M1P5 1343 aa8□□□□□ -1.13
SEMA3D-204ENST00000484038 PRAMEF22A3QJZ6 481 aa8□□□□□ -1.13
SEMA3D-204ENST00000484038 UBAP2LQ14157 1087 aaKnown RBP8□□□□□ -1.13
SEMA3D-204ENST00000484038 DEFB115Q30KQ5 88 aa8□□□□□ -1.13
SEMA3D-204ENST00000484038 PNMA8AQ86V59 439 aaPredicted RBP8□□□□□ -1.13
SEMA3D-204ENST00000484038 CNTROBQ8N137 903 aa8□□□□□ -1.13
SEMA3D-204ENST00000484038 C7orf43Q8WVR3 580 aa8□□□□□ -1.13
SEMA3D-204ENST00000484038 ANKIB1Q9P2G1 1089 aa8□□□□□ -1.13
SEMA3D-204ENST00000484038 NIP7Q9Y221 180 aaKnown RBP eCLIP8□□□□□ -1.13
SEMA3D-204ENST00000484038 USP16Q9Y5T5 823 aa8□□□□□ -1.13
SEMA3D-204ENST00000484038 WDR33Q9C0J8 1336 aaKnown RBP8□□□□□ -1.13
SEMA3D-204ENST00000484038 CEMIPQ8WUJ3 1361 aa7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 RASSF10A6NK89 507 aa7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 HSPA8P11142 646 aaKnown RBP7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 BMP4P12644 408 aa7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 IARSP41252 1262 aaKnown RBP7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 MAP2K1Q02750 393 aaPredicted RBP7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 SRSF11Q05519 484 aaKnown RBP7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 GRM1Q13255 1194 aa7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 FKBP5Q13451 457 aaPredicted RBP7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 CLEC4GQ6UXB4 293 aa7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 TPTE2Q6XPS3 522 aa7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 RTKN2Q8IZC4 609 aa7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 SVOPQ8N4V2 548 aa7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 ABHD8Q96I13 439 aa7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.99□□□□□ -1.13
SEMA3D-204ENST00000484038 FZD9O00144 591 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 MAPTP10636 758 aaKnown RBP7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 PRKAR2BP31323 418 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 HIF1AQ16665 826 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 RTN1Q16799 776 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 GPC2Q8N158 579 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 SYNE4Q8N205 404 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 JDP2Q8WYK2 163 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 SUSD3Q96L08 255 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 SNRPA1P09661 255 aaKnown RBP7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 CD33P20138 364 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 MCM10Q7L590 875 aa7.98□□□□□ -1.13
SEMA3D-204ENST00000484038 ZNF280CQ8ND82 737 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms