RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 COA7Q96BR5 231 aa16.03■□□□□ 0.16
UBR4-213ENST00000483922 XAGE2Q96GT9 111 aa16.03■□□□□ 0.16
UBR4-213ENST00000483922 ZMYND8Q9ULU4 1186 aaPredicted RBP16.03■□□□□ 0.16
UBR4-213ENST00000483922 PLXNB2O15031 1838 aa16.03■□□□□ 0.16
UBR4-213ENST00000483922 PDS5AQ29RF7 1337 aaKnown RBP16.02■□□□□ 0.16
UBR4-213ENST00000483922 UBTFL1P0CB47 393 aaPredicted RBP16.02■□□□□ 0.16
UBR4-213ENST00000483922 HMGCS2P54868 508 aa16.02■□□□□ 0.16
UBR4-213ENST00000483922 TFCP2Q12800 502 aa16.02■□□□□ 0.16
UBR4-213ENST00000483922 ALDH1L2Q3SY69 923 aa16.02■□□□□ 0.16
UBR4-213ENST00000483922 Q7L0L9 218 aa16.02■□□□□ 0.16
UBR4-213ENST00000483922 NECAB2Q7Z6G3 386 aa16.02■□□□□ 0.16
UBR4-213ENST00000483922 DZIP1Q86YF9 867 aaKnown RBP16.02■□□□□ 0.16
UBR4-213ENST00000483922 PROCA1Q8NCQ7 364 aaPredicted RBP16.02■□□□□ 0.16
UBR4-213ENST00000483922 MEIS3Q99687 375 aa16.02■□□□□ 0.16
UBR4-213ENST00000483922 ASCC2Q9H1I8 757 aaPredicted RBP16.02■□□□□ 0.16
UBR4-213ENST00000483922 HMG20BQ9P0W2 317 aa16.02■□□□□ 0.16
UBR4-213ENST00000483922 NOB1Q9ULX3 412 aaKnown RBP16.02■□□□□ 0.16
UBR4-213ENST00000483922 A0A1B0GUL7 405 aa16.01■□□□□ 0.15
UBR4-213ENST00000483922 E9PSI1 815 aa16.01■□□□□ 0.15
UBR4-213ENST00000483922 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
UBR4-213ENST00000483922 SYN1P17600 705 aa16.01■□□□□ 0.15
UBR4-213ENST00000483922 CAPN2P17655 700 aa16.01■□□□□ 0.15
UBR4-213ENST00000483922 CAP2P40123 477 aa16.01■□□□□ 0.15
UBR4-213ENST00000483922 SHROOM1Q2M3G4 852 aaPredicted RBP16.01■□□□□ 0.15
UBR4-213ENST00000483922 SH3D19Q5HYK7 790 aa16.01■□□□□ 0.15
UBR4-213ENST00000483922 C7orf61Q8IZ16 206 aa16.01■□□□□ 0.15
UBR4-213ENST00000483922 TRMT2AQ8IZ69 625 aaKnown RBP16.01■□□□□ 0.15
UBR4-213ENST00000483922 ZGPATQ8N5A5 531 aaKnown RBP16.01■□□□□ 0.15
UBR4-213ENST00000483922 ZNF280CQ8ND82 737 aa16.01■□□□□ 0.15
UBR4-213ENST00000483922 TRIB2Q92519 343 aa16.01■□□□□ 0.15
UBR4-213ENST00000483922 NSUN4Q96CB9 384 aaKnown RBP16.01■□□□□ 0.15
UBR4-213ENST00000483922 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBR4-213ENST00000483922 DNAH12Q6ZR08 3092 aa16■□□□□ 0.15
UBR4-213ENST00000483922 RPTORQ8N122 1335 aa16■□□□□ 0.15
UBR4-213ENST00000483922 MAP3K21Q5TCX8 1036 aa16■□□□□ 0.15
UBR4-213ENST00000483922 ANKLE1Q8NAG6 615 aa16■□□□□ 0.15
UBR4-213ENST00000483922 OSBPL5Q9H0X9 879 aaPredicted RBP16■□□□□ 0.15
UBR4-213ENST00000483922 TXNRD2Q9NNW7 524 aa16■□□□□ 0.15
UBR4-213ENST00000483922 MORF4L1Q9UBU8 362 aa16■□□□□ 0.15
UBR4-213ENST00000483922 OGDHLQ9ULD0 1010 aa16■□□□□ 0.15
UBR4-213ENST00000483922 LOC285556D6RIA3 1793 aa16■□□□□ 0.15
UBR4-213ENST00000483922 PFASO15067 1338 aa15.99■□□□□ 0.15
UBR4-213ENST00000483922 HMGCRP04035 888 aa15.99■□□□□ 0.15
UBR4-213ENST00000483922 Q3C1V9 767 aa15.99■□□□□ 0.15
UBR4-213ENST00000483922 ERICH6Q7L0X2 663 aa15.99■□□□□ 0.15
UBR4-213ENST00000483922 P2RX7Q99572 595 aaKnown RBP15.99■□□□□ 0.15
UBR4-213ENST00000483922 SMC4Q9NTJ3 1288 aa15.99■□□□□ 0.15
UBR4-213ENST00000483922 CUL9Q8IWT3 2517 aa15.99■□□□□ 0.15
UBR4-213ENST00000483922 MAGEA10P43363 369 aaPredicted RBP15.98■□□□□ 0.15
UBR4-213ENST00000483922 GCLCP48506 637 aaPredicted RBP15.98■□□□□ 0.15
UBR4-213ENST00000483922 SPTY2D1Q68D10 685 aaPredicted RBP15.98■□□□□ 0.15
UBR4-213ENST00000483922 NBPF3Q9H094 633 aa15.98■□□□□ 0.15
UBR4-213ENST00000483922 DNAJC18Q9H819 358 aa15.98■□□□□ 0.15
UBR4-213ENST00000483922 HMX1Q9NP08 348 aaPredicted RBP15.98■□□□□ 0.15
UBR4-213ENST00000483922 VCANP13611 3396 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 SIPA1L1O43166 1804 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 USP17L5A8MUK1 530 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 COL6A1P12109 1028 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 CYP2B6P20813 491 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 LRIT3Q3SXY7 679 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 SLF2Q8IX21 1173 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 DEFB123Q8N688 67 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 SH3RF3Q8TEJ3 882 aaPredicted RBP15.97■□□□□ 0.15
UBR4-213ENST00000483922 USP6NLQ92738 828 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 RBPJLQ9UBG7 517 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 PNMA3Q9UL41 463 aa15.97■□□□□ 0.15
UBR4-213ENST00000483922 SPTBN5Q9NRC6 3674 aaKnown RBP15.97■□□□□ 0.15
UBR4-213ENST00000483922 DDX60LQ5H9U9 1706 aaKnown RBP15.97■□□□□ 0.15
UBR4-213ENST00000483922 EYSQ5T1H1 3165 aa15.96■□□□□ 0.15
UBR4-213ENST00000483922 LHX8Q68G74 356 aa15.96■□□□□ 0.15
UBR4-213ENST00000483922 GPR153Q6NV75 609 aa15.96■□□□□ 0.15
UBR4-213ENST00000483922 SPATA5Q8NB90 893 aa15.96■□□□□ 0.15
UBR4-213ENST00000483922 NEUROD6Q96NK8 337 aa15.96■□□□□ 0.15
UBR4-213ENST00000483922 WDR18Q9BV38 432 aa15.96■□□□□ 0.15
UBR4-213ENST00000483922 C11orf49Q9H6J7 331 aa15.96■□□□□ 0.15
UBR4-213ENST00000483922 MTMR10Q9NXD2 777 aa15.96■□□□□ 0.15
UBR4-213ENST00000483922 COL2A1P02458 1487 aaPredicted RBP15.96■□□□□ 0.14
UBR4-213ENST00000483922 HOXA7P31268 230 aaPredicted RBP15.95■□□□□ 0.14
UBR4-213ENST00000483922 MCAMP43121 646 aa15.95■□□□□ 0.14
UBR4-213ENST00000483922 BACE1P56817 501 aa15.95■□□□□ 0.14
UBR4-213ENST00000483922 CACNB2Q08289 660 aaPredicted RBP15.95■□□□□ 0.14
UBR4-213ENST00000483922 MTX1Q13505 466 aa15.95■□□□□ 0.14
UBR4-213ENST00000483922 CCL14Q16627 93 aa15.95■□□□□ 0.14
UBR4-213ENST00000483922 ADGRA1Q86SQ6 560 aa15.95■□□□□ 0.14
UBR4-213ENST00000483922 METTL16Q86W50 562 aaKnown RBP15.95■□□□□ 0.14
UBR4-213ENST00000483922 PORCNQ9H237 461 aa15.95■□□□□ 0.14
UBR4-213ENST00000483922 ATAD5Q96QE3 1844 aa15.95■□□□□ 0.14
UBR4-213ENST00000483922 SRGAP3O43295 1099 aa15.94■□□□□ 0.14
UBR4-213ENST00000483922 PRKAR2AP13861 404 aaKnown RBP15.94■□□□□ 0.14
UBR4-213ENST00000483922 ARID4AP29374 1257 aaPredicted RBP15.94■□□□□ 0.14
UBR4-213ENST00000483922 CCND3P30281 292 aaPredicted RBP15.94■□□□□ 0.14
UBR4-213ENST00000483922 MTMR2Q13614 643 aa15.94■□□□□ 0.14
UBR4-213ENST00000483922 MVPQ14764 893 aaKnown RBP15.94■□□□□ 0.14
UBR4-213ENST00000483922 TDHQ8IZJ6 230 aa15.94■□□□□ 0.14
UBR4-213ENST00000483922 TNNQ9UQP3 1299 aa15.94■□□□□ 0.14
UBR4-213ENST00000483922 ZNF316A6NFI3 1004 aaPredicted RBP15.93■□□□□ 0.14
UBR4-213ENST00000483922 MAP4K4O95819 1239 aaPredicted RBP15.93■□□□□ 0.14
UBR4-213ENST00000483922 HERVK_113P62684 666 aa15.93■□□□□ 0.14
UBR4-213ENST00000483922 LRRC26Q2I0M4 334 aa15.93■□□□□ 0.14
UBR4-213ENST00000483922 TEX11Q8IYF3 940 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms