RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 PLEKHH2Q8IVE3 1493 aa5.68□□□□□ -1.5
LRCH3-217ENST00000483442 AFF2P51816 1311 aa5.68□□□□□ -1.5
LRCH3-217ENST00000483442 PLXNC1O60486 1568 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 FAM170BA6NMN3 283 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 PPP1R15AO75807 674 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-217ENST00000483442 ADH5P11766 374 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 FOSL1P15407 271 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 MAOBP27338 520 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 USP11P51784 963 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 RBM6P78332 1123 aaKnown RBP5.67□□□□□ -1.5
LRCH3-217ENST00000483442 EZH1Q92800 747 aaPredicted RBP5.67□□□□□ -1.5
LRCH3-217ENST00000483442 OSBPL1AQ9BXW6 950 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 LIN7BQ9HAP6 207 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 ATG3Q9NT62 314 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 CCDC39Q9UFE4 941 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 LEMD3Q9Y2U8 911 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 ACTL7BQ9Y614 415 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 CDC42BPAQ5VT25 1732 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 MSH6P52701 1360 aa5.67□□□□□ -1.5
LRCH3-217ENST00000483442 RTEL1-TNFRSF6BF6WH68 1400 aa5.66□□□□□ -1.5
LRCH3-217ENST00000483442 CASKIN1Q8WXD9 1431 aa5.66□□□□□ -1.5
LRCH3-217ENST00000483442 CCDC18Q5T9S5 1454 aa5.66□□□□□ -1.5
LRCH3-217ENST00000483442 SCAF11Q99590 1463 aaKnown RBP5.66□□□□□ -1.5
LRCH3-217ENST00000483442 KDM5DQ9BY66 1539 aa5.66□□□□□ -1.5
LRCH3-217ENST00000483442 SERPINB4P48594 390 aa5.66□□□□□ -1.5
LRCH3-217ENST00000483442 PAOXQ6QHF9 649 aa5.66□□□□□ -1.5
LRCH3-217ENST00000483442 ZAR1Q86SH2 424 aa5.66□□□□□ -1.5
LRCH3-217ENST00000483442 C8orf37Q96NL8 207 aa5.66□□□□□ -1.5
LRCH3-217ENST00000483442 CLEC4MQ9H2X3 399 aaPredicted RBP5.66□□□□□ -1.5
LRCH3-217ENST00000483442 RNF114Q9Y508 228 aa5.66□□□□□ -1.5
LRCH3-217ENST00000483442 ROBO1Q9Y6N7 1651 aa5.66□□□□□ -1.5
LRCH3-217ENST00000483442 INO80Q9ULG1 1556 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-217ENST00000483442 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
LRCH3-217ENST00000483442 DYNC1LI2O43237 492 aaPredicted RBP5.65□□□□□ -1.5
LRCH3-217ENST00000483442 ICMTO60725 284 aa5.65□□□□□ -1.5
LRCH3-217ENST00000483442 NFICP08651 508 aa5.65□□□□□ -1.5
LRCH3-217ENST00000483442 ATF3P18847 181 aa5.65□□□□□ -1.5
LRCH3-217ENST00000483442 ORC1Q13415 861 aa5.65□□□□□ -1.5
LRCH3-217ENST00000483442 IDI1Q13907 227 aa5.65□□□□□ -1.5
LRCH3-217ENST00000483442 POU4F3Q15319 338 aa5.65□□□□□ -1.5
LRCH3-217ENST00000483442 TBC1D32Q96NH3 1257 aa5.65□□□□□ -1.5
LRCH3-217ENST00000483442 FAM105AQ9NUU6 356 aa5.65□□□□□ -1.5
LRCH3-217ENST00000483442 TIMELESSQ9UNS1 1208 aa5.65□□□□□ -1.5
LRCH3-217ENST00000483442 LRP6O75581 1613 aa5.65□□□□□ -1.51
LRCH3-217ENST00000483442 MTUS2Q5JR59 1369 aa5.65□□□□□ -1.51
LRCH3-217ENST00000483442 LRRIQ1Q96JM4 1722 aa5.65□□□□□ -1.51
LRCH3-217ENST00000483442 MBD5Q9P267 1494 aa5.64□□□□□ -1.51
LRCH3-217ENST00000483442 SYNMO15061 1565 aa5.64□□□□□ -1.51
LRCH3-217ENST00000483442 RAB6AP20340 208 aa5.64□□□□□ -1.51
LRCH3-217ENST00000483442 ARHGAP4P98171 946 aa5.64□□□□□ -1.51
LRCH3-217ENST00000483442 AKAP4Q5JQC9 854 aa5.64□□□□□ -1.51
LRCH3-217ENST00000483442 SEZ6L2Q6UXD5 910 aa5.64□□□□□ -1.51
LRCH3-217ENST00000483442 ERICH6Q7L0X2 663 aa5.64□□□□□ -1.51
LRCH3-217ENST00000483442 SEMA6CQ9H3T2 930 aa5.64□□□□□ -1.51
LRCH3-217ENST00000483442 XIRP1Q702N8 1843 aaKnown RBP5.64□□□□□ -1.51
LRCH3-217ENST00000483442 TMEM2Q9UHN6 1383 aa5.64□□□□□ -1.51
LRCH3-217ENST00000483442 NCOA2Q15596 1464 aa5.64□□□□□ -1.51
LRCH3-217ENST00000483442 ADGBQ8N7X0 1667 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 PHLPP1O60346 1717 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 H3BRB1 525 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 IGHA2P01877 340 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 PRNPP04156 253 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 TXKP42681 527 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 KIAA0319Q5VV43 1072 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 CBLL1Q75N03 491 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 DYMQ7RTS9 669 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 WDR89Q96FK6 387 aaPredicted RBP5.63□□□□□ -1.51
LRCH3-217ENST00000483442 ZNF576Q9H609 170 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 TUT1Q9H6E5 874 aaKnown RBP5.63□□□□□ -1.51
LRCH3-217ENST00000483442 ACSS3Q9H6R3 686 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 C19orf44Q9H6X5 657 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 LGR6Q9HBX8 967 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 NPHS2Q9NP85 383 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 C1GALT1Q9NS00 363 aa5.63□□□□□ -1.51
LRCH3-217ENST00000483442 ZC3H7BQ9UGR2 993 aaKnown RBP5.63□□□□□ -1.51
LRCH3-217ENST00000483442 CFAP65Q6ZU64 1925 aaKnown RBP5.63□□□□□ -1.51
LRCH3-217ENST00000483442 BTBD11A6QL63 1104 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 CYP26A1O43174 497 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 B3GALT4O96024 378 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 BRINP3Q76B58 766 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 ZNF765Q7L2R6 523 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 WFDC3Q8IUB2 231 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 DDX17Q92841 729 aaKnown RBP5.62□□□□□ -1.51
LRCH3-217ENST00000483442 LRRC59Q96AG4 307 aaKnown RBP5.62□□□□□ -1.51
LRCH3-217ENST00000483442 GSX1Q9H4S2 264 aaPredicted RBP5.62□□□□□ -1.51
LRCH3-217ENST00000483442 EGFL7Q9UHF1 273 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 PPP1R9AQ9ULJ8 1098 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 FGD6Q6ZV73 1430 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 ERVK-7P63135 1459 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 LRRC9Q6ZRR7 1453 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 CDK12Q9NYV4 1490 aaPredicted RBP5.62□□□□□ -1.51
LRCH3-217ENST00000483442 ARHGAP23Q9P227 1491 aa5.62□□□□□ -1.51
LRCH3-217ENST00000483442 ZC3H13Q5T200 1668 aaKnown RBP5.62□□□□□ -1.51
LRCH3-217ENST00000483442 RGS12O14924 1447 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 CYP11A1P05108 521 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 ITPKAP23677 461 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 FAAP100Q0VG06 881 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 GIMAP7Q8NHV1 300 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 FAM129BQ96TA1 746 aa5.61□□□□□ -1.51
LRCH3-217ENST00000483442 WDR18Q9BV38 432 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms