RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 FSD1Q9BTV5 496 aa16.16■□□□□ 0.18
SSR1-208ENST00000483409 PUS7LQ9H0K6 701 aaKnown RBP16.16■□□□□ 0.18
SSR1-208ENST00000483409 PI4KBQ9UBF8 816 aa16.16■□□□□ 0.18
SSR1-208ENST00000483409 CASP8AP2Q9UKL3 1982 aa16.16■□□□□ 0.18
SSR1-208ENST00000483409 PTPRFP10586 1907 aa16.15■□□□□ 0.18
SSR1-208ENST00000483409 MANSC4A6NHS7 340 aaPredicted RBP16.15■□□□□ 0.18
SSR1-208ENST00000483409 RNF113AO15541 343 aaKnown RBP16.15■□□□□ 0.18
SSR1-208ENST00000483409 TBC1D12O60347 775 aa16.15■□□□□ 0.18
SSR1-208ENST00000483409 HSPA8P11142 646 aaKnown RBP16.15■□□□□ 0.18
SSR1-208ENST00000483409 NOL9Q5SY16 702 aaKnown RBP16.15■□□□□ 0.18
SSR1-208ENST00000483409 ERO1BQ86YB8 467 aa16.15■□□□□ 0.18
SSR1-208ENST00000483409 RNF186Q9NXI6 227 aa16.15■□□□□ 0.18
SSR1-208ENST00000483409 CA12O43570 354 aa16.14■□□□□ 0.17
SSR1-208ENST00000483409 PRKAB2O43741 272 aa16.14■□□□□ 0.17
SSR1-208ENST00000483409 HLA-DOAP06340 250 aa16.14■□□□□ 0.17
SSR1-208ENST00000483409 TM4SF4P48230 202 aa16.14■□□□□ 0.17
SSR1-208ENST00000483409 LBX1P52954 281 aa16.14■□□□□ 0.17
SSR1-208ENST00000483409 PLEKHM2Q8IWE5 1019 aa16.14■□□□□ 0.17
SSR1-208ENST00000483409 SCYL3Q8IZE3 742 aa16.14■□□□□ 0.17
SSR1-208ENST00000483409 CRACR2BQ8N4Y2 399 aaPredicted RBP16.14■□□□□ 0.17
SSR1-208ENST00000483409 APPBP2Q92624 585 aa16.14■□□□□ 0.17
SSR1-208ENST00000483409 TRIM34Q9BYJ4 488 aa16.14■□□□□ 0.17
SSR1-208ENST00000483409 PICK1Q9NRD5 415 aa16.14■□□□□ 0.17
SSR1-208ENST00000483409 HERC5Q9UII4 1024 aaKnown RBP16.14■□□□□ 0.17
SSR1-208ENST00000483409 TRPA1O75762 1119 aa16.13■□□□□ 0.17
SSR1-208ENST00000483409 ZFYP08048 801 aaPredicted RBP16.13■□□□□ 0.17
SSR1-208ENST00000483409 PPIL2Q13356 520 aa16.13■□□□□ 0.17
SSR1-208ENST00000483409 LRRFIP1Q32MZ4 808 aaKnown RBP16.13■□□□□ 0.17
SSR1-208ENST00000483409 OSBP2Q969R2 916 aa16.13■□□□□ 0.17
SSR1-208ENST00000483409 DNAJC18Q9H819 358 aa16.13■□□□□ 0.17
SSR1-208ENST00000483409 DCP1AQ9NPI6 582 aaPredicted RBP16.13■□□□□ 0.17
SSR1-208ENST00000483409 MCM9Q9NXL9 1143 aa16.13■□□□□ 0.17
SSR1-208ENST00000483409 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.13■□□□□ 0.17
SSR1-208ENST00000483409 M0R2C6 588 aa16.12■□□□□ 0.17
SSR1-208ENST00000483409 IRF6O14896 467 aa16.12■□□□□ 0.17
SSR1-208ENST00000483409 CTNND1O60716 968 aaKnown RBP16.12■□□□□ 0.17
SSR1-208ENST00000483409 POLR3DP05423 398 aaPredicted RBP16.12■□□□□ 0.17
SSR1-208ENST00000483409 PPATQ06203 517 aa16.12■□□□□ 0.17
SSR1-208ENST00000483409 RRP1BQ14684 758 aaKnown RBP16.12■□□□□ 0.17
SSR1-208ENST00000483409 FOXP4Q8IVH2 680 aaPredicted RBP16.12■□□□□ 0.17
SSR1-208ENST00000483409 EVI5LQ96CN4 794 aa16.12■□□□□ 0.17
SSR1-208ENST00000483409 MS4A4AQ96JQ5 239 aa16.12■□□□□ 0.17
SSR1-208ENST00000483409 SAGE1Q9NXZ1 904 aa16.12■□□□□ 0.17
SSR1-208ENST00000483409 SLC4A4Q9Y6R1 1079 aa16.12■□□□□ 0.17
SSR1-208ENST00000483409 CCL15-CCL14A0A0B4J2E2 113 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 TRIM6-TRIM34B2RNG4 842 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 IGF2BP3O00425 579 aaKnown RBP eCLIP16.11■□□□□ 0.17
SSR1-208ENST00000483409 PDE4AP27815 886 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 PLCD1P51178 756 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 GTF2A2P52657 109 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 INHBEP58166 350 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 EVX2Q03828 476 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 CCL15Q16663 113 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 TTC6Q86TZ1 520 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 CCDC84Q86UT8 332 aaPredicted RBP16.11■□□□□ 0.17
SSR1-208ENST00000483409 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
SSR1-208ENST00000483409 IFNL1Q8IU54 200 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 BRI3BPQ8WY22 251 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 ATP8A2Q9NTI2 1148 aa16.11■□□□□ 0.17
SSR1-208ENST00000483409 TESPA1A2RU30 521 aaPredicted RBP16.1■□□□□ 0.17
SSR1-208ENST00000483409 GPAA1O43292 621 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 GDF11O95390 407 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 CYP2D6P10635 497 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 PTPRAP18433 802 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 CAP2P40123 477 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 SNAPC2Q13487 334 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 SHROOM1Q2M3G4 852 aaPredicted RBP16.1■□□□□ 0.17
SSR1-208ENST00000483409 RILPL2Q969X0 211 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 STRBPQ96SI9 672 aaKnown RBP16.1■□□□□ 0.17
SSR1-208ENST00000483409 SEC62Q99442 399 aaKnown RBP16.1■□□□□ 0.17
SSR1-208ENST00000483409 PTPN18Q99952 460 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 EHD4Q9H223 541 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 OSBPL3Q9H4L5 887 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 SERPINB13Q9UIV8 391 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 ZHX2Q9Y6X8 837 aa16.1■□□□□ 0.17
SSR1-208ENST00000483409 TBC1D8O95759 1140 aa16.09■□□□□ 0.17
SSR1-208ENST00000483409 CENPBP07199 599 aaPredicted RBP16.09■□□□□ 0.17
SSR1-208ENST00000483409 ZMYM1Q5SVZ6 1142 aa16.09■□□□□ 0.17
SSR1-208ENST00000483409 DDRGK1Q96HY6 314 aa16.09■□□□□ 0.17
SSR1-208ENST00000483409 CYP2D7A0A087X1C5 515 aa16.08■□□□□ 0.16
SSR1-208ENST00000483409 NEFLP07196 543 aa16.08■□□□□ 0.16
SSR1-208ENST00000483409 CETPP11597 493 aa16.08■□□□□ 0.16
SSR1-208ENST00000483409 COL13A1Q5TAT6 717 aaPredicted RBP16.08■□□□□ 0.16
SSR1-208ENST00000483409 PRDM10Q9NQV6 1147 aa16.08■□□□□ 0.16
SSR1-208ENST00000483409 KCNH4Q9UQ05 1017 aa16.08■□□□□ 0.16
SSR1-208ENST00000483409 TRIM75PA6NK02 468 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 GSG1L2A8MUP6 293 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 USP17L12C9JPN9 530 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 USP17L21D6R901 530 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 SMIM22K7EJ46 135 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 ALDH1A1P00352 501 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 JAG1P78504 1218 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 OTUD7BQ6GQQ9 843 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 CCDC129Q6ZRS4 1044 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 FAM43AQ8N2R8 423 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 SLC44A5Q8NCS7 719 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 R3HDMLQ9H3Y0 253 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 AFG3L2Q9Y4W6 797 aa16.07■□□□□ 0.16
SSR1-208ENST00000483409 LOC285556D6RIA3 1793 aa16.06■□□□□ 0.16
SSR1-208ENST00000483409 APPP05067 770 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms