RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 PAPPA2Q9BXP8 1791 aa21.29■■□□□ 1
CPNE1-224ENST00000483359 FGAP02671 866 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 PTH1RQ03431 593 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 DCAF15Q66K64 600 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 C2orf69Q8N8R5 385 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 HOOK2Q96ED9 719 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 DYNLL2Q96FJ2 89 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 DNAJC18Q9H819 358 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 TMEM88BA6NKF7 163 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 APLP1P51693 650 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 C12orf60Q5U649 245 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 SERPINB13Q9UIV8 391 aa21.28■■□□□ 1
CPNE1-224ENST00000483359 ABT1Q9ULW3 272 aaKnown RBP21.28■■□□□ 1
CPNE1-224ENST00000483359 UBE2Q2LH0YL09 131 aa21.27■■□□□ 1
CPNE1-224ENST00000483359 USP2O75604 605 aaPredicted RBP21.27■■□□□ 1
CPNE1-224ENST00000483359 SLC44A5Q8NCS7 719 aa21.27■■□□□ 1
CPNE1-224ENST00000483359 WRNIP1Q96S55 665 aa21.27■■□□□ 1
CPNE1-224ENST00000483359 DSCC1Q9BVC3 393 aa21.27■■□□□ 1
CPNE1-224ENST00000483359 OTOFQ9HC10 1997 aa21.27■■□□□ 1
CPNE1-224ENST00000483359 HAND2P61296 217 aa21.27■□□□□ 0.99
CPNE1-224ENST00000483359 HTRA3P83110 453 aa21.27■□□□□ 0.99
CPNE1-224ENST00000483359 KIAA1211Q6ZU35 1233 aa21.27■□□□□ 0.99
CPNE1-224ENST00000483359 ZNF341Q9BYN7 854 aa21.27■□□□□ 0.99
CPNE1-224ENST00000483359 ARMC9Q7Z3E5 817 aa21.26■□□□□ 0.99
CPNE1-224ENST00000483359 HERC5Q9UII4 1024 aaKnown RBP21.26■□□□□ 0.99
CPNE1-224ENST00000483359 IREB2P48200 963 aaKnown RBP21.25■□□□□ 0.99
CPNE1-224ENST00000483359 PPARAQ07869 468 aa21.25■□□□□ 0.99
CPNE1-224ENST00000483359 SBK1Q52WX2 424 aa21.25■□□□□ 0.99
CPNE1-224ENST00000483359 EHD4Q9H223 541 aa21.25■□□□□ 0.99
CPNE1-224ENST00000483359 INPP5BP32019 993 aa21.25■□□□□ 0.99
CPNE1-224ENST00000483359 HUNKP57058 714 aa21.25■□□□□ 0.99
CPNE1-224ENST00000483359 CTDSPL2Q05D32 466 aa21.25■□□□□ 0.99
CPNE1-224ENST00000483359 FOXP4Q8IVH2 680 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-224ENST00000483359 ZKSCAN4Q969J2 545 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-224ENST00000483359 KLRG1Q96E93 195 aa21.25■□□□□ 0.99
CPNE1-224ENST00000483359 LSG1Q9H089 658 aaKnown RBP21.25■□□□□ 0.99
CPNE1-224ENST00000483359 ALX1Q15699 326 aa21.24■□□□□ 0.99
CPNE1-224ENST00000483359 SAPCD2Q86UD0 394 aa21.24■□□□□ 0.99
CPNE1-224ENST00000483359 ZMYM6O95789 1325 aa21.23■□□□□ 0.99
CPNE1-224ENST00000483359 TBC1D12O60347 775 aa21.23■□□□□ 0.99
CPNE1-224ENST00000483359 FKBP1BP68106 108 aa21.23■□□□□ 0.99
CPNE1-224ENST00000483359 GABPAQ06546 454 aa21.23■□□□□ 0.99
CPNE1-224ENST00000483359 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.23■□□□□ 0.992e-6■□□□□ 10.3
CPNE1-224ENST00000483359 PRDM1O75626 825 aa21.23■□□□□ 0.99
CPNE1-224ENST00000483359 GDF11O95390 407 aa21.23■□□□□ 0.99
CPNE1-224ENST00000483359 RRP1BQ14684 758 aaKnown RBP21.23■□□□□ 0.99
CPNE1-224ENST00000483359 CLMNQ96JQ2 1002 aa21.23■□□□□ 0.99
CPNE1-224ENST00000483359 CREBZFQ9NS37 354 aa21.23■□□□□ 0.99
CPNE1-224ENST00000483359 TLL2Q9Y6L7 1015 aa21.23■□□□□ 0.99
CPNE1-224ENST00000483359 MYH8P13535 1937 aa21.22■□□□□ 0.99
CPNE1-224ENST00000483359 LAMA4Q16363 1823 aa21.22■□□□□ 0.99
CPNE1-224ENST00000483359 PHF20L1A8MW92 1017 aa21.22■□□□□ 0.99
CPNE1-224ENST00000483359 SHMT1P34896 483 aa21.22■□□□□ 0.99
CPNE1-224ENST00000483359 MAP3K10Q02779 954 aa21.22■□□□□ 0.99
CPNE1-224ENST00000483359 VGLL4Q14135 290 aa21.22■□□□□ 0.99
CPNE1-224ENST00000483359 MAP3K11Q16584 847 aa21.22■□□□□ 0.99
CPNE1-224ENST00000483359 SHROOM1Q2M3G4 852 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-224ENST00000483359 METTL16Q86W50 562 aaKnown RBP21.22■□□□□ 0.99
CPNE1-224ENST00000483359 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-224ENST00000483359 ROBO3Q96MS0 1386 aa21.22■□□□□ 0.99
CPNE1-224ENST00000483359 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-224ENST00000483359 C16orf86Q6ZW13 317 aa21.21■□□□□ 0.99
CPNE1-224ENST00000483359 PAXIP1Q6ZW49 1069 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-224ENST00000483359 MAP4K1Q92918 833 aa21.21■□□□□ 0.99
CPNE1-224ENST00000483359 RBM8AQ9Y5S9 174 aaKnown RBP21.21■□□□□ 0.99
CPNE1-224ENST00000483359 ZNF213O14771 459 aa21.21■□□□□ 0.99
CPNE1-224ENST00000483359 CDK8P49336 464 aa21.21■□□□□ 0.99
CPNE1-224ENST00000483359 ANKRD13AQ8IZ07 590 aa21.21■□□□□ 0.99
CPNE1-224ENST00000483359 INCENPQ9NQS7 918 aa21.21■□□□□ 0.99
CPNE1-224ENST00000483359 CSADQ9Y600 493 aa21.21■□□□□ 0.99
CPNE1-224ENST00000483359 HSPA6P17066 643 aa21.2■□□□□ 0.98
CPNE1-224ENST00000483359 MAP3K9P80192 1104 aa21.2■□□□□ 0.98
CPNE1-224ENST00000483359 GRM1Q13255 1194 aa21.2■□□□□ 0.98
CPNE1-224ENST00000483359 IMMTQ16891 758 aaKnown RBP21.2■□□□□ 0.98
CPNE1-224ENST00000483359 NBPF3Q9H094 633 aa21.2■□□□□ 0.98
CPNE1-224ENST00000483359 ELP3Q9H9T3 547 aa21.2■□□□□ 0.98
CPNE1-224ENST00000483359 SWAP70Q9UH65 585 aa21.2■□□□□ 0.98
CPNE1-224ENST00000483359 CTNNA3Q9UI47 895 aa21.2■□□□□ 0.98
CPNE1-224ENST00000483359 U3KPZ7 1027 aaPredicted RBP21.2■□□□□ 0.98
CPNE1-224ENST00000483359 ATAD5Q96QE3 1844 aa21.2■□□□□ 0.98
CPNE1-224ENST00000483359 LDLRAD1Q5T700 205 aa21.19■□□□□ 0.98
CPNE1-224ENST00000483359 TBC1D10CQ8IV04 446 aa21.19■□□□□ 0.98
CPNE1-224ENST00000483359 ZNF112Q9UJU3 913 aa21.19■□□□□ 0.98
CPNE1-224ENST00000483359 DOCK1Q14185 1865 aa21.19■□□□□ 0.98
CPNE1-224ENST00000483359 SLC3A2P08195 630 aaKnown RBP21.19■□□□□ 0.98
CPNE1-224ENST00000483359 C8orf34Q49A92 452 aa21.19■□□□□ 0.98
CPNE1-224ENST00000483359 CERKLQ49MI3 558 aaPredicted RBP21.19■□□□□ 0.98
CPNE1-224ENST00000483359 TATDN1Q6P1N9 297 aa21.19■□□□□ 0.98
CPNE1-224ENST00000483359 MKNK2Q9HBH9 465 aa21.19■□□□□ 0.98
CPNE1-224ENST00000483359 TOMM22Q9NS69 142 aa21.19■□□□□ 0.98
CPNE1-224ENST00000483359 TACC3Q9Y6A5 838 aa21.19■□□□□ 0.98
CPNE1-224ENST00000483359 MPHOSPH10O00566 681 aaKnown RBP21.18■□□□□ 0.98
CPNE1-224ENST00000483359 REC8O95072 547 aa21.18■□□□□ 0.98
CPNE1-224ENST00000483359 JAG1P78504 1218 aa21.18■□□□□ 0.98
CPNE1-224ENST00000483359 CCDC84Q86UT8 332 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-224ENST00000483359 ANAPC4Q9UJX5 808 aa21.18■□□□□ 0.98
CPNE1-224ENST00000483359 SNCAIPQ9Y6H5 919 aa21.18■□□□□ 0.98
CPNE1-224ENST00000483359 CYP21A2P08686 494 aa21.17■□□□□ 0.98
CPNE1-224ENST00000483359 CAP2P40123 477 aa21.17■□□□□ 0.98
CPNE1-224ENST00000483359 PDE4BQ07343 736 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms