RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PTPN18Q99952 460 aa15.74■□□□□ 0.11
COL21A1-209ENST00000482933 IDI2Q9BXS1 227 aa15.74■□□□□ 0.11
COL21A1-209ENST00000482933 FAM198AQ9UFP1 575 aa15.74■□□□□ 0.11
COL21A1-209ENST00000482933 CCL15-CCL14A0A0B4J2E2 113 aa15.73■□□□□ 0.11
COL21A1-209ENST00000482933 ENTPD3O75355 529 aa15.73■□□□□ 0.11
COL21A1-209ENST00000482933 SURF6O75683 361 aaKnown RBP15.73■□□□□ 0.11
COL21A1-209ENST00000482933 RLBP1P12271 317 aa15.73■□□□□ 0.11
COL21A1-209ENST00000482933 CCL15Q16663 113 aa15.73■□□□□ 0.11
COL21A1-209ENST00000482933 ZKSCAN4Q969J2 545 aaPredicted RBP15.73■□□□□ 0.11
COL21A1-209ENST00000482933 C1orf115Q9H7X2 142 aa15.73■□□□□ 0.11
COL21A1-209ENST00000482933 HMG20BQ9P0W2 317 aa15.73■□□□□ 0.11
COL21A1-209ENST00000482933 SNCAIPQ9Y6H5 919 aa15.73■□□□□ 0.11
COL21A1-209ENST00000482933 MROH7-TTC4A0A0A0MT08 1334 aa15.72■□□□□ 0.11
COL21A1-209ENST00000482933 WDHD1O75717 1129 aaPredicted RBP15.72■□□□□ 0.11
COL21A1-209ENST00000482933 LDHCP07864 332 aa15.72■□□□□ 0.11
COL21A1-209ENST00000482933 BTDP43251 543 aa15.72■□□□□ 0.11
COL21A1-209ENST00000482933 GSTO1P78417 241 aa15.72■□□□□ 0.11
COL21A1-209ENST00000482933 MLLT1Q03111 559 aaPredicted RBP15.72■□□□□ 0.11
COL21A1-209ENST00000482933 PPATQ06203 517 aa15.72■□□□□ 0.11
COL21A1-209ENST00000482933 CRHR2Q13324 411 aa15.72■□□□□ 0.11
COL21A1-209ENST00000482933 CCDC158Q5M9N0 1113 aa15.72■□□□□ 0.11
COL21A1-209ENST00000482933 PPP4R3BQ5MIZ7 849 aa15.72■□□□□ 0.11
COL21A1-209ENST00000482933 FBXO46Q6PJ61 603 aaPredicted RBP15.72■□□□□ 0.11
COL21A1-209ENST00000482933 CETPP11597 493 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 RGS3P49796 1198 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 MECOMQ03112 1051 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 PPIL2Q13356 520 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 SNAPC2Q13487 334 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 TNNI3KQ59H18 835 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 TTC39AQ5SRH9 613 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 BRI3BPQ8WY22 251 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 ERO1AQ96HE7 468 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 ZFYVE28Q9HCC9 887 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 ZNF112Q9UJU3 913 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 HPS5Q9UPZ3 1129 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 NOP58Q9Y2X3 529 aaKnown RBP15.71■□□□□ 0.11
COL21A1-209ENST00000482933 FPGT-TNNI3KV9GXZ4 949 aa15.71■□□□□ 0.11
COL21A1-209ENST00000482933 GPR75-ASB3A0A0A6YYF3 556 aa15.7■□□□□ 0.1
COL21A1-209ENST00000482933 ARHGAP33O14559 1287 aa15.7■□□□□ 0.1
COL21A1-209ENST00000482933 IRF6O14896 467 aa15.7■□□□□ 0.1
COL21A1-209ENST00000482933 MAP4K4O95819 1239 aaPredicted RBP15.7■□□□□ 0.1
COL21A1-209ENST00000482933 INPP5BP32019 993 aa15.7■□□□□ 0.1
COL21A1-209ENST00000482933 MCAMP43121 646 aa15.7■□□□□ 0.1
COL21A1-209ENST00000482933 TAF1CQ15572 869 aaPredicted RBP15.7■□□□□ 0.1
COL21A1-209ENST00000482933 ZCCHC17Q9NP64 241 aaKnown RBP15.7■□□□□ 0.1
COL21A1-209ENST00000482933 RAI14Q9P0K7 980 aa15.7■□□□□ 0.1
COL21A1-209ENST00000482933 SP3Q02447 781 aa15.69■□□□□ 0.1
COL21A1-209ENST00000482933 NOL9Q5SY16 702 aaKnown RBP15.69■□□□□ 0.1
COL21A1-209ENST00000482933 PI16Q6UXB8 463 aa15.69■□□□□ 0.1
COL21A1-209ENST00000482933 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
COL21A1-209ENST00000482933 NSUN4Q96CB9 384 aaKnown RBP15.69■□□□□ 0.1
COL21A1-209ENST00000482933 LRP2BPQ9P2M1 347 aa15.69■□□□□ 0.1
COL21A1-209ENST00000482933 TRIM17Q9Y577 477 aa15.69■□□□□ 0.1
COL21A1-209ENST00000482933 IGSF3O75054 1194 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 CEP85Q6P2H3 762 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 TBC1D9Q6ZT07 1266 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 ZFPM1Q8IX07 1006 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 PANK1Q8TE04 598 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 DDX27Q96GQ7 796 aaKnown RBP15.68■□□□□ 0.1
COL21A1-209ENST00000482933 DBNDD2Q9BQY9 259 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 RFX7Q2KHR2 1363 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 PICALMQ13492 652 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 ARHGEF6Q15052 776 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 POTEEQ6S8J3 1075 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 ERC1Q8IUD2 1116 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 FAM43AQ8N2R8 423 aa15.68■□□□□ 0.1
COL21A1-209ENST00000482933 ZNF512BQ96KM6 892 aaPredicted RBP15.68■□□□□ 0.1
COL21A1-209ENST00000482933 NOL10Q9BSC4 688 aaKnown RBP15.68■□□□□ 0.1
COL21A1-209ENST00000482933 DOCK2Q92608 1830 aa15.67■□□□□ 0.1
COL21A1-209ENST00000482933 CENPBP07199 599 aaPredicted RBP15.67■□□□□ 0.1
COL21A1-209ENST00000482933 RHBDL3P58872 404 aa15.67■□□□□ 0.1
COL21A1-209ENST00000482933 MFSD10Q14728 455 aa15.67■□□□□ 0.1
COL21A1-209ENST00000482933 OTOP1Q7RTM1 612 aa15.67■□□□□ 0.1
COL21A1-209ENST00000482933 CD99L2Q8TCZ2 262 aa15.67■□□□□ 0.1
COL21A1-209ENST00000482933 ZNF384Q8TF68 577 aa15.67■□□□□ 0.1
COL21A1-209ENST00000482933 DDX4Q9NQI0 724 aaKnown RBP15.67■□□□□ 0.1
COL21A1-209ENST00000482933 KCNH4Q9UQ05 1017 aa15.67■□□□□ 0.1
COL21A1-209ENST00000482933 DDTLA6NHG4 134 aaPredicted RBP15.66■□□□□ 0.1
COL21A1-209ENST00000482933 BTBD19C9JJ37 291 aa15.66■□□□□ 0.1
COL21A1-209ENST00000482933 SOX10P56693 466 aa15.66■□□□□ 0.1
COL21A1-209ENST00000482933 MAP3K10Q02779 954 aa15.66■□□□□ 0.1
COL21A1-209ENST00000482933 HSP90AB4PQ58FF6 505 aa15.66■□□□□ 0.1
COL21A1-209ENST00000482933 SH3BP5LQ7L8J4 393 aa15.66■□□□□ 0.1
COL21A1-209ENST00000482933 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.66■□□□□ 0.1
COL21A1-209ENST00000482933 LARP6Q9BRS8 491 aaKnown RBP15.66■□□□□ 0.1
COL21A1-209ENST00000482933 CHMP4BQ9H444 224 aaKnown RBP15.66■□□□□ 0.1
COL21A1-209ENST00000482933 EFCC1Q9HA90 598 aa15.66■□□□□ 0.1
COL21A1-209ENST00000482933 DDX19BQ9UMR2 479 aa15.66■□□□□ 0.1
COL21A1-209ENST00000482933 ATRNL1Q5VV63 1379 aa15.66■□□□□ 0.1
COL21A1-209ENST00000482933 PHF20L1A8MW92 1017 aa15.65■□□□□ 0.1
COL21A1-209ENST00000482933 CXCL11O14625 94 aa15.65■□□□□ 0.1
COL21A1-209ENST00000482933 TLR2O60603 784 aa15.65■□□□□ 0.1
COL21A1-209ENST00000482933 BAG3O95817 575 aa15.65■□□□□ 0.1
COL21A1-209ENST00000482933 NAA16Q6N069 864 aaPredicted RBP15.65■□□□□ 0.1
COL21A1-209ENST00000482933 SCYL3Q8IZE3 742 aa15.65■□□□□ 0.1
COL21A1-209ENST00000482933 CCDC8Q9H0W5 538 aaPredicted RBP15.65■□□□□ 0.1
COL21A1-209ENST00000482933 PICK1Q9NRD5 415 aa15.65■□□□□ 0.1
COL21A1-209ENST00000482933 SNRKQ9NRH2 765 aa15.65■□□□□ 0.1
COL21A1-209ENST00000482933 CTNND1O60716 968 aaKnown RBP15.64■□□□□ 0.09
COL21A1-209ENST00000482933 ANKRD23Q86SG2 305 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms