RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 UBR2Q8IWV8 1755 aa16.34■□□□□ 0.21
COL9A2-207ENST00000482722 ZNF213O14771 459 aa16.34■□□□□ 0.21
COL9A2-207ENST00000482722 YEATS4O95619 227 aa16.34■□□□□ 0.21
COL9A2-207ENST00000482722 KARSQ15046 597 aaKnown RBP16.34■□□□□ 0.21
COL9A2-207ENST00000482722 ICE2Q659A1 982 aa16.34■□□□□ 0.21
COL9A2-207ENST00000482722 STK11IPQ8N1F8 1099 aa16.34■□□□□ 0.21
COL9A2-207ENST00000482722 UBN2Q6ZU65 1347 aa16.34■□□□□ 0.21
COL9A2-207ENST00000482722 GPAA1O43292 621 aa16.33■□□□□ 0.21
COL9A2-207ENST00000482722 N4BP1O75113 896 aaKnown RBP16.33■□□□□ 0.21
COL9A2-207ENST00000482722 ITGA6P23229 1130 aa16.33■□□□□ 0.21
COL9A2-207ENST00000482722 BRD3Q15059 726 aa16.33■□□□□ 0.21
COL9A2-207ENST00000482722 JAKMIP3Q5VZ66 844 aa16.33■□□□□ 0.21
COL9A2-207ENST00000482722 DESI2Q9BSY9 194 aa16.33■□□□□ 0.21
COL9A2-207ENST00000482722 GOLGA6L9A6NEM1 432 aa16.33■□□□□ 0.2
COL9A2-207ENST00000482722 IRS4O14654 1257 aaPredicted RBP16.33■□□□□ 0.2
COL9A2-207ENST00000482722 IFIT5Q13325 482 aaKnown RBP16.33■□□□□ 0.2
COL9A2-207ENST00000482722 METTL24Q5JXM2 366 aa16.33■□□□□ 0.2
COL9A2-207ENST00000482722 SPECC1Q5M775 1068 aa16.33■□□□□ 0.2
COL9A2-207ENST00000482722 CTR9Q6PD62 1173 aa16.33■□□□□ 0.2
COL9A2-207ENST00000482722 LDHAL6AQ6ZMR3 332 aa16.33■□□□□ 0.2
COL9A2-207ENST00000482722 CIAO1O76071 339 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 IVLP07476 585 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 GOLGA6L1Q8N7Z2 621 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-207ENST00000482722 IRX2Q9BZI1 471 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-207ENST00000482722 HPS5Q9UPZ3 1129 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 WTIPA6NIX2 430 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-207ENST00000482722 IDH1O75874 414 aaKnown RBP16.32■□□□□ 0.2
COL9A2-207ENST00000482722 CMA1P23946 247 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 CRKLP46109 303 aaKnown RBP16.32■□□□□ 0.2
COL9A2-207ENST00000482722 ADKP55263 362 aaKnown RBP16.32■□□□□ 0.2
COL9A2-207ENST00000482722 BEND6Q5SZJ8 279 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-207ENST00000482722 PACS2Q86VP3 889 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 ZBTB38Q8NAP3 1195 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-207ENST00000482722 TTLL11Q8NHH1 800 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 NCOA7Q8NI08 942 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 TUBE1Q9UJT0 475 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 AKAP2Q9Y2D5 859 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 LAMB4A4D0S4 1761 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 DISP2A7MBM2 1401 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 COL16A1Q07092 1604 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-207ENST00000482722 FOXN1O15353 648 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 ANTXR2P58335 489 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 KIF23Q02241 960 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-207ENST00000482722 ANKZF1Q9H8Y5 726 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 SUGCTQ9HAC7 445 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 SEC31BQ9NQW1 1179 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 FAN1Q9Y2M0 1017 aa16.32■□□□□ 0.2
COL9A2-207ENST00000482722 LOC102724428A0A0B4J2F2 783 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 CDC27P30260 824 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 SIK1P57059 783 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 CHMP4BP1P59074 171 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 SHC4Q6S5L8 630 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 YY1AP1Q9H869 796 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 PUF60Q9UHX1 559 aaKnown RBP16.31■□□□□ 0.2
COL9A2-207ENST00000482722 TBX2Q13207 712 aaPredicted RBP16.31■□□□□ 0.2
COL9A2-207ENST00000482722 SLC9C2Q5TAH2 1124 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 INTS5Q6P9B9 1019 aaKnown RBP16.31■□□□□ 0.2
COL9A2-207ENST00000482722 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
COL9A2-207ENST00000482722 FOXP4Q8IVH2 680 aaPredicted RBP16.31■□□□□ 0.2
COL9A2-207ENST00000482722 TC2NQ8N9U0 490 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 RGS22Q8NE09 1264 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 APPBP2Q92624 585 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
COL9A2-207ENST00000482722 INCENPQ9NQS7 918 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 CNNM1Q9NRU3 951 aa16.31■□□□□ 0.2
COL9A2-207ENST00000482722 UBE2Q2LH0YL09 131 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 PDE4BQ07343 736 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 TRDNQ13061 729 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
COL9A2-207ENST00000482722 SUSD4Q5VX71 490 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 WWC2Q6AWC2 1192 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 HDXQ7Z353 690 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 MB21D2Q8IYB1 491 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-207ENST00000482722 PHKBQ93100 1093 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 CHMP4CQ96CF2 233 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 PNKPQ96T60 521 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 MRPL44Q9H9J2 332 aaKnown RBP16.3■□□□□ 0.2
COL9A2-207ENST00000482722 STX10O60499 249 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 PCCAP05165 728 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-207ENST00000482722 MAGEA9P43362 315 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 LONRF3Q496Y0 759 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 TTC31Q49AM3 519 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-207ENST00000482722 MICU3Q86XE3 530 aa16.3■□□□□ 0.2
COL9A2-207ENST00000482722 EIF3CLB5ME19 914 aaKnown RBP16.29■□□□□ 0.2
COL9A2-207ENST00000482722 ANKRD65E5RJM6 399 aa16.29■□□□□ 0.2
COL9A2-207ENST00000482722 CUTAO60888 179 aa16.29■□□□□ 0.2
COL9A2-207ENST00000482722 ZFYP08048 801 aaPredicted RBP16.29■□□□□ 0.2
COL9A2-207ENST00000482722 MCAMP43121 646 aa16.29■□□□□ 0.2
COL9A2-207ENST00000482722 BRAPQ7Z569 592 aa16.29■□□□□ 0.2
COL9A2-207ENST00000482722 SRGAP1Q7Z6B7 1085 aa16.29■□□□□ 0.2
COL9A2-207ENST00000482722 EIF3CQ99613 913 aaKnown RBP16.29■□□□□ 0.2
COL9A2-207ENST00000482722 NUP188Q5SRE5 1749 aa16.29■□□□□ 0.2
COL9A2-207ENST00000482722 MTF1Q14872 753 aa16.29■□□□□ 0.2
COL9A2-207ENST00000482722 SLC39A14Q15043 492 aa16.29■□□□□ 0.2
COL9A2-207ENST00000482722 HNRNPLLQ8WVV9 542 aaKnown RBP16.29■□□□□ 0.2
COL9A2-207ENST00000482722 MYL10Q9BUA6 226 aa16.29■□□□□ 0.2
COL9A2-207ENST00000482722 PCDHA5Q9Y5H7 936 aa16.29■□□□□ 0.2
COL9A2-207ENST00000482722 TJP1Q07157 1748 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms