RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 PCSK2P16519 638 aa9.46□□□□□ -0.9
CLK1-212ENST00000482590 KCNA6P17658 529 aa9.46□□□□□ -0.9
CLK1-212ENST00000482590 MZF1P28698 734 aaPredicted RBP9.46□□□□□ -0.9
CLK1-212ENST00000482590 NXPE3Q969Y0 559 aa9.46□□□□□ -0.9
CLK1-212ENST00000482590 SLC26A8Q96RN1 970 aa9.46□□□□□ -0.9
CLK1-212ENST00000482590 AMOTL2Q9Y2J4 779 aa9.46□□□□□ -0.9
CLK1-212ENST00000482590 MSH6P52701 1360 aa9.46□□□□□ -0.9
CLK1-212ENST00000482590 PLEKHG1Q9ULL1 1385 aa9.46□□□□□ -0.9
CLK1-212ENST00000482590 FAM135BQ49AJ0 1406 aa9.46□□□□□ -0.9
CLK1-212ENST00000482590 TRPM2O94759 1503 aa9.46□□□□□ -0.9
CLK1-212ENST00000482590 SOX1O00570 391 aaPredicted RBP9.45□□□□□ -0.9
CLK1-212ENST00000482590 MPSTP25325 297 aa9.45□□□□□ -0.9
CLK1-212ENST00000482590 TXKP42681 527 aa9.45□□□□□ -0.9
CLK1-212ENST00000482590 EIF1AXP47813 144 aaKnown RBP9.45□□□□□ -0.9
CLK1-212ENST00000482590 VN1R5Q7Z5H4 357 aa9.45□□□□□ -0.9
CLK1-212ENST00000482590 PMEPA1Q969W9 287 aa9.45□□□□□ -0.9
CLK1-212ENST00000482590 OSMRQ99650 979 aa9.45□□□□□ -0.9
CLK1-212ENST00000482590 ROCK1Q13464 1354 aa9.45□□□□□ -0.9
CLK1-212ENST00000482590 COL16A1Q07092 1604 aaPredicted RBP9.45□□□□□ -0.9
CLK1-212ENST00000482590 WDR64B1ANS9 1081 aa9.44□□□□□ -0.9
CLK1-212ENST00000482590 WNT11O96014 354 aa9.44□□□□□ -0.9
CLK1-212ENST00000482590 HOXA10P31260 410 aaPredicted RBP9.44□□□□□ -0.9
CLK1-212ENST00000482590 ARL4DP49703 201 aa9.44□□□□□ -0.9
CLK1-212ENST00000482590 SGO2Q562F6 1265 aa9.44□□□□□ -0.9
CLK1-212ENST00000482590 BSNDQ8WZ55 320 aa9.44□□□□□ -0.9
CLK1-212ENST00000482590 MFSD14AQ96MC6 490 aa9.44□□□□□ -0.9
CLK1-212ENST00000482590 ZKSCAN3Q9BRR0 538 aa9.44□□□□□ -0.9
CLK1-212ENST00000482590 SHPRHQ149N8 1683 aa9.44□□□□□ -0.9
CLK1-212ENST00000482590 XRN1Q8IZH2 1706 aaKnown RBP9.43□□□□□ -0.9
CLK1-212ENST00000482590 NRXN3Q9Y4C0 1643 aa9.43□□□□□ -0.9
CLK1-212ENST00000482590 EREGO14944 169 aa9.43□□□□□ -0.9
CLK1-212ENST00000482590 GAS2O43903 313 aaKnown RBP9.43□□□□□ -0.9
CLK1-212ENST00000482590 MAP4P27816 1152 aaKnown RBP9.43□□□□□ -0.9
CLK1-212ENST00000482590 TTC16Q8NEE8 873 aa9.43□□□□□ -0.9
CLK1-212ENST00000482590 TMPRSS13Q9BYE2 586 aa9.43□□□□□ -0.9
CLK1-212ENST00000482590 IKBKEQ14164 716 aa9.42□□□□□ -0.9
CLK1-212ENST00000482590 GTF3C2Q8WUA4 911 aaPredicted RBP9.42□□□□□ -0.9
CLK1-212ENST00000482590 POLIQ9UNA4 740 aa9.42□□□□□ -0.9
CLK1-212ENST00000482590 TIAF1O95411 115 aa9.41□□□□□ -0.9
CLK1-212ENST00000482590 DLGAP3O95886 979 aa9.41□□□□□ -0.9
CLK1-212ENST00000482590 PDE4CQ08493 712 aa9.41□□□□□ -0.9
CLK1-212ENST00000482590 MTMR3Q13615 1198 aa9.41□□□□□ -0.9
CLK1-212ENST00000482590 NUTM2GQ5VZR2 741 aa9.41□□□□□ -0.9
CLK1-212ENST00000482590 SMG8Q8ND04 991 aaKnown RBP9.41□□□□□ -0.9
CLK1-212ENST00000482590 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.41□□□□□ -0.9
CLK1-212ENST00000482590 PIM2Q9P1W9 311 aa9.41□□□□□ -0.9
CLK1-212ENST00000482590 NALCNQ8IZF0 1738 aa9.41□□□□□ -0.9
CLK1-212ENST00000482590 CLTCL1P53675 1640 aa9.41□□□□□ -0.9
CLK1-212ENST00000482590 NHSL1Q5SYE7 1610 aa9.41□□□□□ -0.9
CLK1-212ENST00000482590 AHDC1Q5TGY3 1603 aaPredicted RBP9.41□□□□□ -0.9
CLK1-212ENST00000482590 LOC100289279A0A1B0GTE1 492 aa9.4□□□□□ -0.9
CLK1-212ENST00000482590 TNFRSF21O75509 655 aa9.4□□□□□ -0.9
CLK1-212ENST00000482590 C12orf50Q8NA57 414 aaPredicted RBP9.4□□□□□ -0.9
CLK1-212ENST00000482590 USP26Q9BXU7 913 aa9.4□□□□□ -0.9
CLK1-212ENST00000482590 SUGCTQ9HAC7 445 aa9.4□□□□□ -0.9
CLK1-212ENST00000482590 RNF114Q9Y508 228 aa9.4□□□□□ -0.9
CLK1-212ENST00000482590 SETBP1Q9Y6X0 1596 aa9.4□□□□□ -0.9
CLK1-212ENST00000482590 ADAMTS13Q76LX8 1427 aa9.39□□□□□ -0.91
CLK1-212ENST00000482590 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
CLK1-212ENST00000482590 NUP155O75694 1391 aa9.39□□□□□ -0.91
CLK1-212ENST00000482590 PIK3R4Q99570 1358 aa9.39□□□□□ -0.91
CLK1-212ENST00000482590 PHACTR2O75167 634 aa9.39□□□□□ -0.91
CLK1-212ENST00000482590 F13BP05160 661 aa9.39□□□□□ -0.91
CLK1-212ENST00000482590 ITGAEP38570 1179 aa9.39□□□□□ -0.91
CLK1-212ENST00000482590 FBXL6Q8N531 539 aa9.39□□□□□ -0.91
CLK1-212ENST00000482590 BHLHE41Q9C0J9 482 aaPredicted RBP9.39□□□□□ -0.91
CLK1-212ENST00000482590 SOX17Q9H6I2 414 aaPredicted RBP9.39□□□□□ -0.91
CLK1-212ENST00000482590 ADGRE2Q9UHX3 823 aa9.39□□□□□ -0.91
CLK1-212ENST00000482590 FOXD3Q9UJU5 478 aaPredicted RBP9.39□□□□□ -0.91
CLK1-212ENST00000482590 EDN3P14138 238 aa9.38□□□□□ -0.91
CLK1-212ENST00000482590 RXRBP28702 533 aa9.38□□□□□ -0.91
CLK1-212ENST00000482590 ALKBH2Q6NS38 261 aa9.38□□□□□ -0.91
CLK1-212ENST00000482590 FAM177A1Q8N128 213 aaPredicted RBP9.38□□□□□ -0.91
CLK1-212ENST00000482590 CYP4F12Q9HCS2 524 aa9.38□□□□□ -0.91
CLK1-212ENST00000482590 ATG3Q9NT62 314 aa9.38□□□□□ -0.91
CLK1-212ENST00000482590 JCADQ9P266 1359 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 PPLO60437 1756 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 NEXMIFQ5QGS0 1516 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 ESRRAP11474 423 aaPredicted RBP9.37□□□□□ -0.91
CLK1-212ENST00000482590 DRD2P14416 443 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 NPR3P17342 541 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 SSFA2P28290 1259 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 PEAR1Q5VY43 1037 aaPredicted RBP9.37□□□□□ -0.91
CLK1-212ENST00000482590 SHISA5Q8N114 240 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 ASAP3Q8TDY4 903 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 SNX29Q8TEQ0 813 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 LATS2Q9NRM7 1088 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 LEMD3Q9Y2U8 911 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 TBX22Q9Y458 520 aa9.37□□□□□ -0.91
CLK1-212ENST00000482590 KRTAP4-8A0A0G2JLE6 195 aa9.36□□□□□ -0.91
CLK1-212ENST00000482590 KCNA1Q09470 495 aa9.36□□□□□ -0.91
CLK1-212ENST00000482590 GIMAP7Q8NHV1 300 aa9.36□□□□□ -0.91
CLK1-212ENST00000482590 DCCP43146 1447 aa9.36□□□□□ -0.91
CLK1-212ENST00000482590 FAM95CA0A1B0GW59 222 aa9.35□□□□□ -0.91
CLK1-212ENST00000482590 TMEM88BA6NKF7 163 aa9.35□□□□□ -0.91
CLK1-212ENST00000482590 MSMPQ1L6U9 139 aa9.35□□□□□ -0.91
CLK1-212ENST00000482590 EXOSC6Q5RKV6 272 aaKnown RBP9.35□□□□□ -0.91
CLK1-212ENST00000482590 CDPF1Q6NVV7 123 aa9.35□□□□□ -0.91
CLK1-212ENST00000482590 ASXL1Q8IXJ9 1541 aa9.35□□□□□ -0.91
CLK1-212ENST00000482590 LRP6O75581 1613 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms