RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 IL1RAPL2Q9NP60 686 aa28.68■■■□□ 2.18
TTC3-217ENST00000481605 NDUFB9Q9Y6M9 179 aa28.68■■■□□ 2.18
TTC3-217ENST00000481605 MYO5AQ9Y4I1 1855 aaKnown RBP28.68■■■□□ 2.18
TTC3-217ENST00000481605 IDH1O75874 414 aaKnown RBP28.67■■■□□ 2.18
TTC3-217ENST00000481605 GNRH1P01148 92 aa28.67■■■□□ 2.18
TTC3-217ENST00000481605 RPAP2Q8IXW5 612 aaPredicted RBP28.67■■■□□ 2.18
TTC3-217ENST00000481605 RHPN1Q8TCX5 695 aa28.67■■■□□ 2.18
TTC3-217ENST00000481605 DHX36Q9H2U1 1008 aaKnown RBP28.67■■■□□ 2.18
TTC3-217ENST00000481605 ZBTB40Q9NUA8 1239 aa28.67■■■□□ 2.18
TTC3-217ENST00000481605 PI4KBQ9UBF8 816 aa28.67■■■□□ 2.18
TTC3-217ENST00000481605 HERC5Q9UII4 1024 aaKnown RBP28.67■■■□□ 2.18
TTC3-217ENST00000481605 PHIPQ8WWQ0 1821 aa28.66■■■□□ 2.18
TTC3-217ENST00000481605 NBPF11Q86T75 865 aa28.66■■■□□ 2.18
TTC3-217ENST00000481605 MAPKAPK5Q8IW41 473 aa28.66■■■□□ 2.18
TTC3-217ENST00000481605 FLT1P17948 1338 aa28.66■■■□□ 2.18
TTC3-217ENST00000481605 CYP7A1P22680 504 aa28.65■■■□□ 2.18
TTC3-217ENST00000481605 CTGFP29279 349 aa28.65■■■□□ 2.18
TTC3-217ENST00000481605 PSMC4P43686 418 aa28.65■■■□□ 2.18
TTC3-217ENST00000481605 ZNF333Q96JL9 665 aa28.65■■■□□ 2.18
TTC3-217ENST00000481605 CAP2P40123 477 aa28.64■■■□□ 2.18
TTC3-217ENST00000481605 RRP1BQ14684 758 aaKnown RBP28.64■■■□□ 2.18
TTC3-217ENST00000481605 ANTXR1Q9H6X2 564 aa28.64■■■□□ 2.18
TTC3-217ENST00000481605 MKI67P46013 3256 aaKnown RBP28.64■■■□□ 2.18
TTC3-217ENST00000481605 APBB1O00213 710 aa28.64■■■□□ 2.17
TTC3-217ENST00000481605 HMMRO75330 724 aa28.64■■■□□ 2.17
TTC3-217ENST00000481605 DYNLL1P63167 89 aaKnown RBP28.64■■■□□ 2.17
TTC3-217ENST00000481605 SIRT2Q8IXJ6 389 aa28.64■■■□□ 2.17
TTC3-217ENST00000481605 TRIM47Q96LD4 638 aa28.64■■■□□ 2.17
TTC3-217ENST00000481605 SLC45A1Q9Y2W3 748 aa28.64■■■□□ 2.17
TTC3-217ENST00000481605 PTPRFP10586 1907 aa28.63■■■□□ 2.17
TTC3-217ENST00000481605 BCRP11274 1271 aa28.63■■■□□ 2.17
TTC3-217ENST00000481605 PRMT2P55345 433 aa28.63■■■□□ 2.17
TTC3-217ENST00000481605 MAGEB6Q8N7X4 407 aa28.63■■■□□ 2.17
TTC3-217ENST00000481605 FMNL1O95466 1100 aaPredicted RBP28.62■■■□□ 2.17
TTC3-217ENST00000481605 SPP2Q13103 211 aa28.62■■■□□ 2.17
TTC3-217ENST00000481605 MIGA1Q8NAN2 632 aa28.62■■■□□ 2.17
TTC3-217ENST00000481605 KIF1BPQ96EK5 621 aa28.62■■■□□ 2.17
TTC3-217ENST00000481605 PALD1Q9ULE6 856 aa28.62■■■□□ 2.17
TTC3-217ENST00000481605 CLASRPQ8N2M8 674 aaKnown RBP28.61■■■□□ 2.17
TTC3-217ENST00000481605 ZNF280CQ8ND82 737 aa28.61■■■□□ 2.17
TTC3-217ENST00000481605 SH3TC2Q8TF17 1288 aa28.61■■■□□ 2.17
TTC3-217ENST00000481605 TMEM106CQ9BVX2 250 aa28.61■■■□□ 2.17
TTC3-217ENST00000481605 CHMP4BQ9H444 224 aaKnown RBP28.61■■■□□ 2.17
TTC3-217ENST00000481605 SRRDQ9UH36 339 aa28.61■■■□□ 2.17
TTC3-217ENST00000481605 AGTPBP1Q9UPW5 1226 aa28.61■■■□□ 2.17
TTC3-217ENST00000481605 CDK5RAP2Q96SN8 1893 aa28.6■■■□□ 2.17
TTC3-217ENST00000481605 OSBPP22059 807 aa28.6■■■□□ 2.17
TTC3-217ENST00000481605 HOXD10P28358 340 aa28.6■■■□□ 2.17
TTC3-217ENST00000481605 MAP3K12Q12852 859 aa28.6■■■□□ 2.17
TTC3-217ENST00000481605 TBC1D2Q9BYX2 928 aa28.6■■■□□ 2.17
TTC3-217ENST00000481605 SAP30BPQ9UHR5 308 aaKnown RBP28.6■■■□□ 2.17
TTC3-217ENST00000481605 SIPA1L1O43166 1804 aa28.6■■■□□ 2.17
TTC3-217ENST00000481605 FOCADQ5VW36 1801 aa28.6■■■□□ 2.17
TTC3-217ENST00000481605 USP17L5A8MUK1 530 aa28.59■■■□□ 2.17
TTC3-217ENST00000481605 FOXP4Q8IVH2 680 aaPredicted RBP28.59■■■□□ 2.17
TTC3-217ENST00000481605 CRACR2BQ8N4Y2 399 aaPredicted RBP28.59■■■□□ 2.17
TTC3-217ENST00000481605 SMCR8Q8TEV9 937 aaPredicted RBP28.59■■■□□ 2.17
TTC3-217ENST00000481605 TRIM34Q9BYJ4 488 aa28.59■■■□□ 2.17
TTC3-217ENST00000481605 ATAD5Q96QE3 1844 aa28.59■■■□□ 2.17
TTC3-217ENST00000481605 PDE4DIPQ5VU43 2346 aa28.59■■■□□ 2.17
TTC3-217ENST00000481605 RBBP6Q7Z6E9 1792 aaKnown RBP28.59■■■□□ 2.17
TTC3-217ENST00000481605 MYCP01106 439 aaPredicted RBP28.59■■■□□ 2.17
TTC3-217ENST00000481605 EN2P19622 333 aaPredicted RBP28.59■■■□□ 2.17
TTC3-217ENST00000481605 TREML2Q5T2D2 321 aa28.59■■■□□ 2.17
TTC3-217ENST00000481605 METTL16Q86W50 562 aaKnown RBP28.59■■■□□ 2.17
TTC3-217ENST00000481605 CERS3Q8IU89 383 aa28.59■■■□□ 2.17
TTC3-217ENST00000481605 BCL11AQ9H165 835 aa28.59■■■□□ 2.17
TTC3-217ENST00000481605 DNAJC18Q9H819 358 aa28.59■■■□□ 2.17
TTC3-217ENST00000481605 PROCA1Q8NCQ7 364 aaPredicted RBP28.58■■■□□ 2.17
TTC3-217ENST00000481605 HLA-DOAP06340 250 aa28.57■■■□□ 2.16
TTC3-217ENST00000481605 IFIT2P09913 472 aaKnown RBP28.57■■■□□ 2.16
TTC3-217ENST00000481605 FCGRTP55899 365 aa28.57■■■□□ 2.16
TTC3-217ENST00000481605 SLC4A8Q2Y0W8 1093 aa28.57■■■□□ 2.16
TTC3-217ENST00000481605 C20orf194Q5TEA3 1177 aa28.57■■■□□ 2.16
TTC3-217ENST00000481605 AS3MTQ9HBK9 375 aa28.57■■■□□ 2.16
TTC3-217ENST00000481605 MYPNQ86TC9 1320 aa28.56■■■□□ 2.16
TTC3-217ENST00000481605 RAB11FIP3O75154 756 aa28.56■■■□□ 2.16
TTC3-217ENST00000481605 USP5P45974 858 aa28.56■■■□□ 2.16
TTC3-217ENST00000481605 HMGCS2P54868 508 aa28.56■■■□□ 2.16
TTC3-217ENST00000481605 TMED8Q6PL24 325 aaPredicted RBP28.56■■■□□ 2.16
TTC3-217ENST00000481605 RAET1EQ8TD07 263 aa28.56■■■□□ 2.16
TTC3-217ENST00000481605 ASNSP08243 561 aa28.55■■■□□ 2.16
TTC3-217ENST00000481605 TTF1Q15361 905 aaPredicted RBP28.55■■■□□ 2.16
TTC3-217ENST00000481605 PNMA3Q9UL41 463 aa28.55■■■□□ 2.16
TTC3-217ENST00000481605 KIAA0100Q14667 2235 aaKnown RBP28.54■■■□□ 2.16
TTC3-217ENST00000481605 JAG1P78504 1218 aa28.54■■■□□ 2.16
TTC3-217ENST00000481605 PDE3AQ14432 1141 aa28.54■■■□□ 2.16
TTC3-217ENST00000481605 PRPF38BQ5VTL8 546 aaKnown RBP28.54■■■□□ 2.16
TTC3-217ENST00000481605 PRKCZQ05513 592 aa28.53■■■□□ 2.16
TTC3-217ENST00000481605 GDF11O95390 407 aa28.53■■■□□ 2.16
TTC3-217ENST00000481605 SHROOM1Q2M3G4 852 aaPredicted RBP28.53■■■□□ 2.16
TTC3-217ENST00000481605 SH3D19Q5HYK7 790 aa28.53■■■□□ 2.16
TTC3-217ENST00000481605 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.53■■■□□ 2.16
TTC3-217ENST00000481605 DNAJC2Q99543 621 aaKnown RBP28.53■■■□□ 2.16
TTC3-217ENST00000481605 WDR18Q9BV38 432 aa28.53■■■□□ 2.16
TTC3-217ENST00000481605 LOC285556D6RIA3 1793 aa28.52■■■□□ 2.16
TTC3-217ENST00000481605 GRK4P32298 578 aa28.52■■■□□ 2.16
TTC3-217ENST00000481605 MTMR2Q13614 643 aa28.52■■■□□ 2.16
TTC3-217ENST00000481605 ANKRD13CQ8N6S4 541 aa28.52■■■□□ 2.16
TTC3-217ENST00000481605 GOLIM4O00461 696 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms