RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 ZKSCAN3Q9BRR0 538 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 ATG3Q9NT62 314 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 ERBB3P21860 1342 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 CETN3O15182 167 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 CA8P35219 290 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 TFAP4Q01664 338 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 ANO1Q5XXA6 986 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 UNC5CLQ8IV45 518 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 KIAA1524Q8TCG1 905 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 NOX5Q96PH1 765 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 USP44Q9H0E7 712 aa10.63□□□□□ -0.71
GARNL3-216ENST00000481242 MAGI3Q5TCQ9 1506 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 ARAP3Q8WWN8 1544 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 VWA3AA6NCI4 1184 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 TRIM14Q14142 442 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 KIF22Q14807 665 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 MAPKAPK5Q8IW41 473 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 KRT222Q8N1A0 295 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 CCDC155Q8N6L0 562 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 KLHDC4Q8TBB5 520 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 NT5C3AQ9H0P0 336 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 ZKSCAN5Q9Y2L8 839 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 SSH2Q76I76 1423 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 STX10O60499 249 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 CRKLP46109 303 aaKnown RBP10.62□□□□□ -0.71
GARNL3-216ENST00000481242 MYL5Q02045 173 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 DMTNQ08495 405 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 REXO1Q8N1G1 1221 aaKnown RBP10.62□□□□□ -0.71
GARNL3-216ENST00000481242 TGFBRAP1Q8WUH2 860 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 TRMT1Q9NXH9 659 aaKnown RBP10.62□□□□□ -0.71
GARNL3-216ENST00000481242 DNM3Q9UQ16 869 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 PNMA6EA0A0J9YXQ4 647 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 M0QZ92 97 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 TYRO3Q06418 890 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 UBE3CQ15386 1083 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 TTC38Q5R3I4 469 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 NSMFQ6X4W1 530 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 AOPEPQ8N6M6 819 aa10.62□□□□□ -0.71
GARNL3-216ENST00000481242 TRAF5O00463 557 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 TICAM2Q86XR7 235 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 INCENPQ9NQS7 918 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 OGFRQ9NZT2 677 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 LRWD1Q9UFC0 647 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 ZBTB21Q9ULJ3 1066 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 ATP10DQ9P241 1426 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 CALUO43852 315 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-216ENST00000481242 MCF2L2Q86YR7 1114 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 DCPSQ96C86 337 aaKnown RBP10.61□□□□□ -0.71
GARNL3-216ENST00000481242 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.61□□□□□ -0.71
GARNL3-216ENST00000481242 MRPL11Q9Y3B7 192 aaKnown RBP10.61□□□□□ -0.71
GARNL3-216ENST00000481242 CFAP65Q6ZU64 1925 aaKnown RBP10.61□□□□□ -0.71
GARNL3-216ENST00000481242 PDE8BO95263 885 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 ARID4AP29374 1257 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-216ENST00000481242 PPARAQ07869 468 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 BEND3Q5T5X7 828 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 MICALCLQ6ZW33 695 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 MYCBPQ99417 103 aaPredicted RBP10.61□□□□□ -0.71
GARNL3-216ENST00000481242 PRDM1O75626 825 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 ZNF174Q15697 407 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 USPL1Q5W0Q7 1092 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 FAM212AQ96EL1 285 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 ZNF804BA4D1E1 1349 aa10.61□□□□□ -0.71
GARNL3-216ENST00000481242 CTAGE15A4D2H0 777 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 H0YCG3 227 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 SEC24BO95487 1268 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 IVLP07476 585 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 CTAGE8P0CG41 777 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 SKILP12757 684 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 RXRAP19793 462 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 SP4Q02446 784 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 PIK3AP1Q6ZUJ8 805 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 CTAGE6Q86UF2 777 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 CTAGE4Q8IX94 777 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 MLKLQ8NB16 471 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 IQCDQ96DY2 449 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 C16orf45Q96MC5 204 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-216ENST00000481242 STMN4Q9H169 189 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-216ENST00000481242 RASSF4Q9H2L5 321 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 SNX14Q9Y5W7 946 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 FERP16591 822 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 UBXN1Q04323 297 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 BIRC3Q13489 604 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 GRIPAP1Q4V328 841 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 CLEC4GQ6UXB4 293 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 TTLL7Q6ZT98 887 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 OTUD6AQ7L8S5 288 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 GPATCH11Q8N954 259 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 ZNF274Q96GC6 653 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-216ENST00000481242 DNAJC25Q9H1X3 360 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 USP17L12C9JPN9 530 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 USP17L21D6R901 530 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 JAKMIP2Q96AA8 810 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 KCNH3Q9ULD8 1083 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 ROBO2Q9HCK4 1378 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 CCDC169A6NNP5 214 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 FOSP01100 380 aaPredicted RBP10.6□□□□□ -0.71
GARNL3-216ENST00000481242 PDE6AP16499 860 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 SUPT20HL1Q3ZLR7 823 aa10.6□□□□□ -0.71
GARNL3-216ENST00000481242 CPXCR1Q8N123 301 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms