RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 SUGT1Q9Y2Z0 365 aa11.79□□□□□ -0.52
SMARCE1-210ENST00000481231 DAGLAQ9Y4D2 1042 aa11.79□□□□□ -0.52
SMARCE1-210ENST00000481231 MAST3O60307 1309 aa11.79□□□□□ -0.52
SMARCE1-210ENST00000481231 MAST2Q6P0Q8 1798 aa11.79□□□□□ -0.52
SMARCE1-210ENST00000481231 PEX10O60683 326 aa11.78□□□□□ -0.52
SMARCE1-210ENST00000481231 IFIT1P09914 478 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-210ENST00000481231 CACNB2Q08289 660 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-210ENST00000481231 LHX8Q68G74 356 aa11.78□□□□□ -0.52
SMARCE1-210ENST00000481231 SENP6Q9GZR1 1112 aaPredicted RBP11.78□□□□□ -0.52
SMARCE1-210ENST00000481231 PLXNB2O15031 1838 aa11.77□□□□□ -0.52
SMARCE1-210ENST00000481231 E9PSI1 815 aa11.77□□□□□ -0.53
SMARCE1-210ENST00000481231 EYA2O00167 538 aa11.77□□□□□ -0.53
SMARCE1-210ENST00000481231 RFX5P48382 616 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-210ENST00000481231 SMAD3P84022 425 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-210ENST00000481231 CCL14Q16627 93 aa11.77□□□□□ -0.53
SMARCE1-210ENST00000481231 PRKAG2Q9UGJ0 569 aa11.77□□□□□ -0.53
SMARCE1-210ENST00000481231 PNMA3Q9UL41 463 aa11.77□□□□□ -0.53
SMARCE1-210ENST00000481231 LTBP2Q14767 1821 aa11.76□□□□□ -0.53
SMARCE1-210ENST00000481231 PTPRFP10586 1907 aa11.76□□□□□ -0.53
SMARCE1-210ENST00000481231 SLC5A1P13866 664 aa11.76□□□□□ -0.53
SMARCE1-210ENST00000481231 ZKSCAN1P17029 563 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-210ENST00000481231 GRIN2CQ14957 1233 aa11.76□□□□□ -0.53
SMARCE1-210ENST00000481231 WDR66Q8TBY9 1149 aa11.76□□□□□ -0.53
SMARCE1-210ENST00000481231 ADAMTS19Q8TE59 1207 aa11.76□□□□□ -0.53
SMARCE1-210ENST00000481231 LPIN2Q92539 896 aa11.76□□□□□ -0.53
SMARCE1-210ENST00000481231 ZEB1P37275 1124 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 GCLCP48506 637 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 RTP1P59025 263 aa11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 SH3BP5LQ7L8J4 393 aa11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 ATG9AQ7Z3C6 839 aa11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 PPM1EQ8WY54 764 aa11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 BADQ92934 168 aa11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 ASCC2Q9H1I8 757 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 PRDM5Q9NQX1 630 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 USP40Q9NVE5 1235 aa11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 ATP11BQ9Y2G3 1177 aa11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 LRRFIP2Q9Y608 721 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-210ENST00000481231 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
SMARCE1-210ENST00000481231 DOCK2Q92608 1830 aa11.74□□□□□ -0.53
SMARCE1-210ENST00000481231 PRDX5P30044 214 aa11.74□□□□□ -0.53
SMARCE1-210ENST00000481231 RGS3P49796 1198 aa11.74□□□□□ -0.53
SMARCE1-210ENST00000481231 HMGCS2P54868 508 aa11.74□□□□□ -0.53
SMARCE1-210ENST00000481231 SLFN5Q08AF3 891 aa11.74□□□□□ -0.53
SMARCE1-210ENST00000481231 UHRF1Q96T88 793 aaPredicted RBP11.74□□□□□ -0.53
SMARCE1-210ENST00000481231 NUDT12Q9BQG2 462 aa11.74□□□□□ -0.53
SMARCE1-210ENST00000481231 DOCK1Q14185 1865 aa11.74□□□□□ -0.53
SMARCE1-210ENST00000481231 AK9Q5TCS8 1911 aa11.74□□□□□ -0.53
SMARCE1-210ENST00000481231 DDTLA6NHG4 134 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 FAM196BA6NMK8 535 aa11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 CTNND1O60716 968 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 SPP2Q13103 211 aa11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 ATP2B3Q16720 1220 aa11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 ALDH1L2Q3SY69 923 aa11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 ZSCAN29Q8IWY8 852 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 PROCA1Q8NCQ7 364 aaPredicted RBP11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 SOCS4Q8WXH5 440 aa11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 SIL1Q9H173 461 aa11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 SMC4Q9NTJ3 1288 aa11.73□□□□□ -0.53
SMARCE1-210ENST00000481231 LOC285556D6RIA3 1793 aa11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 RFX7Q2KHR2 1363 aa11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 CIAO1O76071 339 aa11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 LDHBP07195 334 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 UBTFL1P0CB47 393 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 XRCC5P13010 732 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 CDCA7LQ96GN5 454 aa11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 NECAB3Q96P71 396 aaPredicted RBP11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 ASB2Q96Q27 587 aa11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 TXNRD2Q9NNW7 524 aa11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 GNL3LQ9NVN8 582 aaKnown RBP11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 CEP126Q9P2H0 1117 aa11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 MORF4L1Q9UBU8 362 aa11.72□□□□□ -0.53
SMARCE1-210ENST00000481231 SYNGAP1Q96PV0 1343 aa11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 BDP1A6H8Y1 2624 aa11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 ADORA1P30542 326 aa11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 PHKA1P46020 1223 aa11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 PDE3AQ14432 1141 aa11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 SH3RF1Q7Z6J0 888 aa11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 ATXN2LQ8WWM7 1075 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 USP6NLQ92738 828 aa11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 RNPC3Q96LT9 517 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 PORCNQ9H237 461 aa11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 DDX4Q9NQI0 724 aaKnown RBP11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 THEGQ9P2T0 379 aa11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 FBXO3Q9UK99 471 aa11.71□□□□□ -0.53
SMARCE1-210ENST00000481231 FRMPD3Q5JV73 1810 aa11.71□□□□□ -0.54
SMARCE1-210ENST00000481231 SALL1Q9NSC2 1324 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 DNAJB2P25686 324 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 IL15P40933 162 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 EPHB4P54760 987 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 MAP3K10Q02779 954 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 PABPC4Q13310 644 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 PICALMQ13492 652 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 POTEEQ6S8J3 1075 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 TRMT44Q8IYL2 757 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 ZNF280CQ8ND82 737 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 APBA2Q99767 749 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 PDLIM7Q9NR12 457 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 FLRT1Q9NZU1 646 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 DENND2AQ9ULE3 1009 aa11.7□□□□□ -0.54
SMARCE1-210ENST00000481231 PA2G4Q9UQ80 394 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms