RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 STAT4Q14765 748 aa9.89□□□□□ -0.83
LSM5-210ENST00000480956 LONRF1Q17RB8 773 aa9.89□□□□□ -0.83
LSM5-210ENST00000480956 HGSNATQ68CP4 663 aa9.89□□□□□ -0.83
LSM5-210ENST00000480956 C1orf228Q6PIY5 440 aa9.89□□□□□ -0.83
LSM5-210ENST00000480956 TPH2Q8IWU9 490 aa9.89□□□□□ -0.83
LSM5-210ENST00000480956 SLC7A3Q8WY07 619 aa9.89□□□□□ -0.83
LSM5-210ENST00000480956 ELP3Q9H9T3 547 aa9.89□□□□□ -0.83
LSM5-210ENST00000480956 INTS7Q9NVH2 962 aaKnown RBP9.89□□□□□ -0.83
LSM5-210ENST00000480956 CABP1Q9NZU7 370 aa9.89□□□□□ -0.83
LSM5-210ENST00000480956 APAF1O14727 1248 aa9.88□□□□□ -0.83
LSM5-210ENST00000480956 TFE3P19532 575 aaPredicted RBP9.88□□□□□ -0.83
LSM5-210ENST00000480956 RRM1P23921 792 aa9.88□□□□□ -0.83
LSM5-210ENST00000480956 STK3Q13188 491 aa9.88□□□□□ -0.83
LSM5-210ENST00000480956 TPTE2Q6XPS3 522 aa9.88□□□□□ -0.83
LSM5-210ENST00000480956 GK5Q6ZS86 529 aa9.88□□□□□ -0.83
LSM5-210ENST00000480956 TTC30BQ8N4P2 665 aa9.88□□□□□ -0.83
LSM5-210ENST00000480956 GJA10Q969M2 543 aa9.88□□□□□ -0.83
LSM5-210ENST00000480956 TRIM8Q9BZR9 551 aa9.88□□□□□ -0.83
LSM5-210ENST00000480956 ZFATQ9P243 1243 aa9.88□□□□□ -0.83
LSM5-210ENST00000480956 BCS1LQ9Y276 419 aa9.88□□□□□ -0.83
LSM5-210ENST00000480956 PRSS47A8MTI9 375 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 EREGO14944 169 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 BRINP1O60477 761 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 CELA3AP09093 270 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 ZNF280AP59817 542 aaPredicted RBP9.87□□□□□ -0.83
LSM5-210ENST00000480956 TOMM20Q15388 145 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 SYDE2Q5VT97 1194 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 AGMOQ6ZNB7 445 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 TRIM42Q8IWZ5 723 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 REXO1Q8N1G1 1221 aaKnown RBP9.87□□□□□ -0.83
LSM5-210ENST00000480956 CNTD1Q8N815 330 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 C19orf47Q8N9M1 422 aaKnown RBP9.87□□□□□ -0.83
LSM5-210ENST00000480956 ATXN2LQ8WWM7 1075 aaKnown RBP9.87□□□□□ -0.83
LSM5-210ENST00000480956 CLUHP3Q96NS8 147 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 CNNM2Q9H8M5 875 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 TMEM63CQ9P1W3 806 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 FAM50BQ9Y247 325 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 F13A1P00488 732 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 TYRP1P17643 537 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 L1CAMP32004 1257 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 DDIT3P35638 169 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 KIAA0319Q5VV43 1072 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 VASH1Q7L8A9 365 aaPredicted RBP9.87□□□□□ -0.83
LSM5-210ENST00000480956 AHI1Q8N157 1196 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 CLASRPQ8N2M8 674 aaKnown RBP9.87□□□□□ -0.83
LSM5-210ENST00000480956 GTF2IRD1Q9UHL9 959 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 RCAN3Q9UKA8 241 aa9.87□□□□□ -0.83
LSM5-210ENST00000480956 LUC7L2Q9Y383 392 aaKnown RBP9.87□□□□□ -0.83
LSM5-210ENST00000480956 TNKSO95271 1327 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 FIBPO43427 364 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 SLC19A1P41440 591 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 MPP2Q14168 576 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 KRT72Q14CN4 511 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 TTBK2Q6IQ55 1244 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 DTHD1Q6ZMT9 781 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 BNC2Q6ZN30 1099 aaPredicted RBP9.86□□□□□ -0.83
LSM5-210ENST00000480956 DDX1Q92499 740 aaKnown RBP9.86□□□□□ -0.83
LSM5-210ENST00000480956 ESYT1Q9BSJ8 1104 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 TMPRSS4Q9NRS4 437 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 KCNG1Q9UIX4 513 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 PARP3Q9Y6F1 533 aa9.86□□□□□ -0.83
LSM5-210ENST00000480956 BICDL2A1A5D9 508 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 IQCA1LA6NCM1 817 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 UBAP1LF5GYI3 381 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 SDSP20132 328 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 GPSM2P81274 684 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 SKOR1P84550 965 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 TMPRSS15P98073 1019 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 JAKMIP3Q5VZ66 844 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 SPRYD7Q5W111 196 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 KRT77Q7Z794 578 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 GATAD2BQ8WXI9 593 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 LRRC27Q9C0I9 530 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 CSRNP2Q9H175 543 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 CHRDQ9H2X0 955 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 A0A1W2PQH9 124 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 FBXO21O94952 628 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 RENBPP51606 427 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 MAP7Q14244 749 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 GBX1Q14549 363 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 DHCR24Q15392 516 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 ALDH1L2Q3SY69 923 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 TRIM67Q6ZTA4 783 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 NLRP8Q86W28 1048 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 TTC17Q96AE7 1141 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 TNIP3Q96KP6 325 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 CEP44Q9C0F1 390 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 BRMS1Q9HCU9 246 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 NLRC4Q9NPP4 1024 aa9.85□□□□□ -0.83
LSM5-210ENST00000480956 CLCQ05315 142 aa9.84□□□□□ -0.83
LSM5-210ENST00000480956 DDX10Q13206 875 aaKnown RBP9.84□□□□□ -0.83
LSM5-210ENST00000480956 PPP4R3AQ6IN85 833 aa9.84□□□□□ -0.83
LSM5-210ENST00000480956 KISS1RQ969F8 398 aaPredicted RBP9.84□□□□□ -0.83
LSM5-210ENST00000480956 XAGE2Q96GT9 111 aa9.84□□□□□ -0.83
LSM5-210ENST00000480956 OSGEPQ9NPF4 335 aa9.84□□□□□ -0.83
LSM5-210ENST00000480956 PHTF1Q9UMS5 762 aa9.84□□□□□ -0.83
LSM5-210ENST00000480956 DGKBQ9Y6T7 804 aa9.84□□□□□ -0.83
LSM5-210ENST00000480956 TGFBR3LH3BV60 316 aa9.83□□□□□ -0.84
LSM5-210ENST00000480956 RBP3P10745 1247 aa9.83□□□□□ -0.84
LSM5-210ENST00000480956 TRIP4Q15650 581 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms