RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 GOLIM4O00461 696 aa20.65■□□□□ 0.9
HSPG2-209ENST00000480900 PDE6AP16499 860 aa20.65■□□□□ 0.9
HSPG2-209ENST00000480900 MIGA1Q8NAN2 632 aa20.65■□□□□ 0.9
HSPG2-209ENST00000480900 PCDHB15Q9Y5E8 787 aa20.65■□□□□ 0.9
HSPG2-209ENST00000480900 FAM196BA6NMK8 535 aa20.64■□□□□ 0.89
HSPG2-209ENST00000480900 SMARCA5O60264 1052 aaPredicted RBP20.64■□□□□ 0.89
HSPG2-209ENST00000480900 SLC9C2Q5TAH2 1124 aa20.64■□□□□ 0.89
HSPG2-209ENST00000480900 ANKRD23Q86SG2 305 aa20.64■□□□□ 0.89
HSPG2-209ENST00000480900 ERO1AQ96HE7 468 aa20.64■□□□□ 0.89
HSPG2-209ENST00000480900 HAUS7Q99871 368 aa20.64■□□□□ 0.89
HSPG2-209ENST00000480900 PAG1Q9NWQ8 432 aa20.64■□□□□ 0.89
HSPG2-209ENST00000480900 ZHX2Q9Y6X8 837 aa20.64■□□□□ 0.89
HSPG2-209ENST00000480900 CCDC85CA6NKD9 419 aa20.63■□□□□ 0.89
HSPG2-209ENST00000480900 SP3Q02447 781 aa20.63■□□□□ 0.89
HSPG2-209ENST00000480900 MOGSQ13724 837 aa20.63■□□□□ 0.89
HSPG2-209ENST00000480900 METTL16Q86W50 562 aaKnown RBP20.63■□□□□ 0.89
HSPG2-209ENST00000480900 BOLA2Q9H3K6 86 aa20.63■□□□□ 0.89
HSPG2-209ENST00000480900 AFG3L2Q9Y4W6 797 aa20.63■□□□□ 0.89
HSPG2-209ENST00000480900 FOXP4Q8IVH2 680 aaPredicted RBP20.62■□□□□ 0.89
HSPG2-209ENST00000480900 EDC3Q96F86 508 aaKnown RBP20.62■□□□□ 0.89
HSPG2-209ENST00000480900 CRBNQ96SW2 442 aa20.62■□□□□ 0.89
HSPG2-209ENST00000480900 RIOK1Q9BRS2 568 aaKnown RBP20.62■□□□□ 0.89
HSPG2-209ENST00000480900 PALD1Q9ULE6 856 aa20.62■□□□□ 0.89
HSPG2-209ENST00000480900 LOC285556D6RIA3 1793 aa20.62■□□□□ 0.89
HSPG2-209ENST00000480900 ZNF532Q9HCE3 1301 aa20.61■□□□□ 0.89
HSPG2-209ENST00000480900 A0A0G2JLL6 359 aaPredicted RBP20.61■□□□□ 0.89
HSPG2-209ENST00000480900 MAGEB6P1A0A0J9YX57 407 aa20.61■□□□□ 0.89
HSPG2-209ENST00000480900 TLR2O60603 784 aa20.61■□□□□ 0.89
HSPG2-209ENST00000480900 HLA-DOAP06340 250 aa20.61■□□□□ 0.89
HSPG2-209ENST00000480900 CAP2P40123 477 aa20.61■□□□□ 0.89
HSPG2-209ENST00000480900 USP5P45974 858 aa20.61■□□□□ 0.89
HSPG2-209ENST00000480900 FBXO46Q6PJ61 603 aaPredicted RBP20.61■□□□□ 0.89
HSPG2-209ENST00000480900 PRRT2Q7Z6L0 340 aaPredicted RBP20.61■□□□□ 0.89
HSPG2-209ENST00000480900 ECHDC1Q9NTX5 307 aa20.61■□□□□ 0.89
HSPG2-209ENST00000480900 SAP30BPQ9UHR5 308 aaKnown RBP20.61■□□□□ 0.89
HSPG2-209ENST00000480900 TCRBV5S4A2TA0A5A2 114 aa20.6■□□□□ 0.89
HSPG2-209ENST00000480900 PDHXO00330 501 aa20.6■□□□□ 0.89
HSPG2-209ENST00000480900 FASTKD5Q7L8L6 764 aaKnown RBP20.6■□□□□ 0.89
HSPG2-209ENST00000480900 CRACR2BQ8N4Y2 399 aaPredicted RBP20.6■□□□□ 0.89
HSPG2-209ENST00000480900 CD99L2Q8TCZ2 262 aa20.6■□□□□ 0.89
HSPG2-209ENST00000480900 GPATCH3Q96I76 525 aa20.6■□□□□ 0.89
HSPG2-209ENST00000480900 TRIM34Q9BYJ4 488 aa20.6■□□□□ 0.89
HSPG2-209ENST00000480900 TBC1D2Q9BYX2 928 aa20.6■□□□□ 0.89
HSPG2-209ENST00000480900 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.6■□□□□ 0.898e-7■■■■□ 23.9
HSPG2-209ENST00000480900 DNAJC18Q9H819 358 aa20.6■□□□□ 0.89
HSPG2-209ENST00000480900 MYH8P13535 1937 aa20.6■□□□□ 0.89
HSPG2-209ENST00000480900 BAZ2AQ9UIF9 1905 aaKnown RBP20.6■□□□□ 0.89
HSPG2-209ENST00000480900 RRP1BQ14684 758 aaKnown RBP20.59■□□□□ 0.89
HSPG2-209ENST00000480900 OTOP1Q7RTM1 612 aa20.59■□□□□ 0.89
HSPG2-209ENST00000480900 CRNKL1Q9BZJ0 848 aaKnown RBP20.59■□□□□ 0.89
HSPG2-209ENST00000480900 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.59■□□□□ 0.89
HSPG2-209ENST00000480900 HPS5Q9UPZ3 1129 aa20.59■□□□□ 0.89
HSPG2-209ENST00000480900 TRIM17Q9Y577 477 aa20.59■□□□□ 0.89
HSPG2-209ENST00000480900 HTTP42858 3142 aa20.59■□□□□ 0.89
HSPG2-209ENST00000480900 ZSWIM8A7E2V4 1837 aa20.58■□□□□ 0.89
HSPG2-209ENST00000480900 TRIM75PA6NK02 468 aa20.58■□□□□ 0.89
HSPG2-209ENST00000480900 ADD2P35612 726 aa20.58■□□□□ 0.89
HSPG2-209ENST00000480900 GPAT2Q6NUI2 795 aa20.58■□□□□ 0.89
HSPG2-209ENST00000480900 GINM1Q9NU53 330 aa20.58■□□□□ 0.89
HSPG2-209ENST00000480900 KIAA0100Q14667 2235 aaKnown RBP20.58■□□□□ 0.88
HSPG2-209ENST00000480900 MGAMO43451 1857 aa20.58■□□□□ 0.88
HSPG2-209ENST00000480900 ADGRA2Q96PE1 1338 aa20.57■□□□□ 0.88
HSPG2-209ENST00000480900 USP17L5A8MUK1 530 aa20.57■□□□□ 0.88
HSPG2-209ENST00000480900 ASNSP08243 561 aa20.57■□□□□ 0.88
HSPG2-209ENST00000480900 AAMPQ13685 434 aa20.57■□□□□ 0.88
HSPG2-209ENST00000480900 ARHGEF6Q15052 776 aa20.57■□□□□ 0.88
HSPG2-209ENST00000480900 CCDC84Q86UT8 332 aaPredicted RBP20.57■□□□□ 0.88
HSPG2-209ENST00000480900 PARK7Q99497 189 aaKnown RBP20.57■□□□□ 0.88
HSPG2-209ENST00000480900 EHD4Q9H223 541 aa20.57■□□□□ 0.88
HSPG2-209ENST00000480900 EFCC1Q9HA90 598 aa20.57■□□□□ 0.88
HSPG2-209ENST00000480900 SLC45A1Q9Y2W3 748 aa20.57■□□□□ 0.88
HSPG2-209ENST00000480900 UBE3CQ15386 1083 aa20.56■□□□□ 0.88
HSPG2-209ENST00000480900 GADL1Q6ZQY3 521 aa20.56■□□□□ 0.88
HSPG2-209ENST00000480900 TTC6Q86TZ1 520 aa20.56■□□□□ 0.88
HSPG2-209ENST00000480900 ZNF280CQ8ND82 737 aa20.56■□□□□ 0.88
HSPG2-209ENST00000480900 AS3MTQ9HBK9 375 aa20.56■□□□□ 0.88
HSPG2-209ENST00000480900 SERPINB13Q9UIV8 391 aa20.56■□□□□ 0.88
HSPG2-209ENST00000480900 SPP2Q13103 211 aa20.55■□□□□ 0.88
HSPG2-209ENST00000480900 SLC4A8Q2Y0W8 1093 aa20.55■□□□□ 0.88
HSPG2-209ENST00000480900 ZSCAN25Q6NSZ9 544 aa20.55■□□□□ 0.88
HSPG2-209ENST00000480900 C17orf99Q6UX52 265 aa20.55■□□□□ 0.88
HSPG2-209ENST00000480900 CAP1Q01518 475 aa20.54■□□□□ 0.88
HSPG2-209ENST00000480900 KIF22Q14807 665 aa20.54■□□□□ 0.88
HSPG2-209ENST00000480900 LCORLQ8N3X6 602 aa20.54■□□□□ 0.88
HSPG2-209ENST00000480900 PROCA1Q8NCQ7 364 aaPredicted RBP20.54■□□□□ 0.88
HSPG2-209ENST00000480900 WDR18Q9BV38 432 aa20.54■□□□□ 0.88
HSPG2-209ENST00000480900 AGTPBP1Q9UPW5 1226 aa20.54■□□□□ 0.88
HSPG2-209ENST00000480900 TTC41PQ6P2S7 1318 aa20.53■□□□□ 0.88
HSPG2-209ENST00000480900 MBD4O95243 580 aa20.53■□□□□ 0.88
HSPG2-209ENST00000480900 LACTBP83111 547 aaPredicted RBP20.53■□□□□ 0.88
HSPG2-209ENST00000480900 HDAC1Q13547 482 aaPredicted RBP20.53■□□□□ 0.88
HSPG2-209ENST00000480900 TATDN1Q6P1N9 297 aa20.53■□□□□ 0.88
HSPG2-209ENST00000480900 ARMT1Q9H993 441 aa20.53■□□□□ 0.88
HSPG2-209ENST00000480900 DCP1AQ9NPI6 582 aaPredicted RBP20.53■□□□□ 0.88
HSPG2-209ENST00000480900 CPA4Q9UI42 421 aa20.53■□□□□ 0.88
HSPG2-209ENST00000480900 ZBTB21Q9ULJ3 1066 aa20.53■□□□□ 0.88
HSPG2-209ENST00000480900 PTPN22Q9Y2R2 807 aa20.53■□□□□ 0.88
HSPG2-209ENST00000480900 DOCK3Q8IZD9 2030 aa20.53■□□□□ 0.88
HSPG2-209ENST00000480900 GDF11O95390 407 aa20.52■□□□□ 0.88
HSPG2-209ENST00000480900 POLR3DP05423 398 aaPredicted RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms