RNA–Protein interactions for RNA: ENST00000480348.6

CNKSR1-204, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 5

Gene CNKSR1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-204ENST00000480348 ZNF384Q8TF68 577 aa13.17□□□□□ -0.3
CNKSR1-204ENST00000480348 ZNF333Q96JL9 665 aa13.17□□□□□ -0.3
CNKSR1-204ENST00000480348 ZHX2Q9Y6X8 837 aa13.17□□□□□ -0.3
CNKSR1-204ENST00000480348 EAF2Q96CJ1 260 aaPredicted RBP13.16□□□□□ -0.3
CNKSR1-204ENST00000480348 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.3
CNKSR1-204ENST00000480348 IL1RAPL2Q9NP60 686 aa13.16□□□□□ -0.3
CNKSR1-204ENST00000480348 TLR7Q9NYK1 1049 aaKnown RBP13.16□□□□□ -0.3
CNKSR1-204ENST00000480348 DBNLQ9UJU6 430 aaKnown RBP13.16□□□□□ -0.3
CNKSR1-204ENST00000480348 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
CNKSR1-204ENST00000480348 AFG3L2Q9Y4W6 797 aa13.16□□□□□ -0.3
CNKSR1-204ENST00000480348 PTCH2Q9Y6C5 1203 aa13.16□□□□□ -0.3
CNKSR1-204ENST00000480348 NAV1Q8NEY1 1877 aa13.16□□□□□ -0.3
CNKSR1-204ENST00000480348 TNRC18O15417 2968 aaPredicted RBP13.16□□□□□ -0.3
CNKSR1-204ENST00000480348 MYH7P12883 1935 aa13.15□□□□□ -0.3
CNKSR1-204ENST00000480348 MOGSQ13724 837 aa13.15□□□□□ -0.3
CNKSR1-204ENST00000480348 PROCA1Q8NCQ7 364 aaPredicted RBP13.15□□□□□ -0.3
CNKSR1-204ENST00000480348 PI4KBQ9UBF8 816 aa13.15□□□□□ -0.3
CNKSR1-204ENST00000480348 HTTP42858 3142 aa13.15□□□□□ -0.3
CNKSR1-204ENST00000480348 MYH8P13535 1937 aa13.15□□□□□ -0.3
CNKSR1-204ENST00000480348 DDX60LQ5H9U9 1706 aaKnown RBP13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 ZAP70P43403 619 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 FCGRTP55899 365 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 PPP4CP60510 307 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 CAP1Q01518 475 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 PABPC4Q13310 644 aaKnown RBP eCLIP13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 GADL1Q6ZQY3 521 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 CLASRPQ8N2M8 674 aaKnown RBP13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 RHPN1Q8TCX5 695 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 SMCR8Q8TEV9 937 aaPredicted RBP13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 KIF1BPQ96EK5 621 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 AS3MTQ9HBK9 375 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 GINM1Q9NU53 330 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 AATFQ9NY61 560 aaKnown RBP eCLIP13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 SRRDQ9UH36 339 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 CPA4Q9UI42 421 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 AGTPBP1Q9UPW5 1226 aa13.14□□□□□ -0.31
CNKSR1-204ENST00000480348 POTEFA5A3E0 1075 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 TRIM75PA6NK02 468 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 RAB11FIP3O75154 756 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 CYP2E1P05181 493 aaPredicted RBP13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 BCRP11274 1271 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 PSMC4P43686 418 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 GPAT2Q6NUI2 795 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 SIRT2Q8IXJ6 389 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 GCC1Q96CN9 775 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 ARHGAP39Q9C0H5 1083 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 FLT1P17948 1338 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 MYPNQ86TC9 1320 aa13.13□□□□□ -0.31
CNKSR1-204ENST00000480348 IDH1O75874 414 aaKnown RBP13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 SLC34A2O95436 690 aa13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 FMNL1O95466 1100 aaPredicted RBP13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 HLA-DOAP06340 250 aa13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 ASNSP08243 561 aa13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 CAP2P40123 477 aa13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 SLC4A8Q2Y0W8 1093 aa13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 ZNF280CQ8ND82 737 aa13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 RAET1EQ8TD07 263 aa13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 SH3RF3Q8TEJ3 882 aaPredicted RBP13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 TRIM47Q96LD4 638 aa13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 PIH1D3Q9NQM4 214 aaKnown RBP13.12□□□□□ -0.31
CNKSR1-204ENST00000480348 USP17L5A8MUK1 530 aa13.11□□□□□ -0.31
CNKSR1-204ENST00000480348 CYP2C8P10632 490 aa13.11□□□□□ -0.31
CNKSR1-204ENST00000480348 OSBPP22059 807 aa13.11□□□□□ -0.31
CNKSR1-204ENST00000480348 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
CNKSR1-204ENST00000480348 MAP3K12Q12852 859 aa13.11□□□□□ -0.31
CNKSR1-204ENST00000480348 TTF1Q15361 905 aaPredicted RBP13.11□□□□□ -0.31
CNKSR1-204ENST00000480348 FOXP4Q8IVH2 680 aaPredicted RBP13.11□□□□□ -0.31
CNKSR1-204ENST00000480348 CRACR2BQ8N4Y2 399 aaPredicted RBP13.11□□□□□ -0.31
CNKSR1-204ENST00000480348 SLAIN1Q8ND83 568 aa13.11□□□□□ -0.31
CNKSR1-204ENST00000480348 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
CNKSR1-204ENST00000480348 DOCK3Q8IZD9 2030 aa13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 FAM196BA6NMK8 535 aa13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 CAPN2P17655 700 aa13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 GRK4P32298 578 aa13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 GCLCP48506 637 aaPredicted RBP13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 UBXN2AP68543 259 aa13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 FAM110CQ1W6H9 321 aa13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 METTL16Q86W50 562 aaKnown RBP13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 SH3TC2Q8TF17 1288 aa13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 TGFBRAP1Q8WUH2 860 aa13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 NDUFB9Q9Y6M9 179 aa13.1□□□□□ -0.31
CNKSR1-204ENST00000480348 CYP7A1P22680 504 aa13.09□□□□□ -0.31
CNKSR1-204ENST00000480348 CENPFP49454 3210 aa13.09□□□□□ -0.31
CNKSR1-204ENST00000480348 SPP2Q13103 211 aa13.09□□□□□ -0.31
CNKSR1-204ENST00000480348 SH3D19Q5HYK7 790 aa13.09□□□□□ -0.31
CNKSR1-204ENST00000480348 ADGRA1Q86SQ6 560 aa13.09□□□□□ -0.31
CNKSR1-204ENST00000480348 MAPKAPK5Q8IW41 473 aa13.09□□□□□ -0.31
CNKSR1-204ENST00000480348 DNAJC2Q99543 621 aaKnown RBP13.09□□□□□ -0.31
CNKSR1-204ENST00000480348 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
CNKSR1-204ENST00000480348 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
CNKSR1-204ENST00000480348 C19orf81C9J6K1 198 aa13.08□□□□□ -0.32
CNKSR1-204ENST00000480348 TNPO2O14787 897 aaKnown RBP13.08□□□□□ -0.32
CNKSR1-204ENST00000480348 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
CNKSR1-204ENST00000480348 CTGFP29279 349 aa13.08□□□□□ -0.32
CNKSR1-204ENST00000480348 HMGCS2P54868 508 aa13.08□□□□□ -0.32
CNKSR1-204ENST00000480348 PRKCZQ05513 592 aa13.08□□□□□ -0.32
CNKSR1-204ENST00000480348 MAGEB6Q8N7X4 407 aa13.08□□□□□ -0.32
CNKSR1-204ENST00000480348 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms