RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RRP12Q5JTH9 1297 aaKnown RBP12.88□□□□□ -0.35
VTI1A-204ENST00000480057 TEX11Q8IYF3 940 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 CERS5Q8N5B7 392 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 NKX2-3Q8TAU0 364 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 ZSCAN10Q96SZ4 725 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-204ENST00000480057 PDGFDQ9GZP0 370 aaPredicted RBP12.88□□□□□ -0.35
VTI1A-204ENST00000480057 NCOA5Q9HCD5 579 aaKnown RBP12.88□□□□□ -0.35
VTI1A-204ENST00000480057 INCENPQ9NQS7 918 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 DAGLAQ9Y4D2 1042 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 TNKSO95271 1327 aa12.88□□□□□ -0.35
VTI1A-204ENST00000480057 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 GOLGA8AA7E2F4 631 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 H3BQV1 296 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 ECE2O60344 883 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 DDAH1O94760 285 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 KCNA3P22001 575 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 DACT2Q5SW24 774 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 IFFO2Q5TF58 517 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 FOXD4L5Q5VV16 416 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-204ENST00000480057 ATL3Q6DD88 541 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 CDC37L1Q7L3B6 337 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 FOXD4L4Q8WXT5 416 aaPredicted RBP12.87□□□□□ -0.35
VTI1A-204ENST00000480057 ANKS1AQ92625 1134 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 TEKT1Q969V4 418 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 TCP11L1Q9NUJ3 509 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 TTF2Q9UNY4 1162 aaKnown RBP12.87□□□□□ -0.35
VTI1A-204ENST00000480057 FLT1P17948 1338 aa12.87□□□□□ -0.35
VTI1A-204ENST00000480057 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 PRPF40AO75400 957 aaKnown RBP12.86□□□□□ -0.35
VTI1A-204ENST00000480057 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
VTI1A-204ENST00000480057 USP17L8P0C7I0 530 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 FDPSP14324 419 aaKnown RBP12.86□□□□□ -0.35
VTI1A-204ENST00000480057 DPEP1P16444 411 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 IFNAR1P17181 557 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 KRT85P78386 507 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 RESTQ13127 1097 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 TGFBRAP1Q8WUH2 860 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 WASF1Q92558 559 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 DDX11Q96FC9 970 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 ZDHHC15Q96MV8 337 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 ORC3Q9UBD5 711 aaPredicted RBP12.86□□□□□ -0.35
VTI1A-204ENST00000480057 ISY1Q9ULR0 285 aaKnown RBP12.86□□□□□ -0.35
VTI1A-204ENST00000480057 DDX49Q9Y6V7 483 aaKnown RBP12.86□□□□□ -0.35
VTI1A-204ENST00000480057 ELP1O95163 1332 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 MYO3BQ8WXR4 1341 aa12.86□□□□□ -0.35
VTI1A-204ENST00000480057 C21orf2O43822 256 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 RANBP6O60518 1105 aaKnown RBP12.85□□□□□ -0.35
VTI1A-204ENST00000480057 POLR3DP05423 398 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-204ENST00000480057 CYP2D6P10635 497 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 NCLP19338 710 aaKnown RBP12.85□□□□□ -0.35
VTI1A-204ENST00000480057 NTRK3Q16288 839 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 RTN1Q16799 776 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 IFIT1BQ5T764 474 aaKnown RBP12.85□□□□□ -0.35
VTI1A-204ENST00000480057 C16orf86Q6ZW13 317 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 CATIPQ7Z7H3 387 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 TTC6Q86TZ1 520 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 MICU3Q86XE3 530 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 DGKHQ86XP1 1220 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 ZNF654Q8IZM8 581 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 ENAHQ8N8S7 591 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-204ENST00000480057 FBXW7Q969H0 707 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 MAP3K14Q99558 947 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 DBNDD1Q9H9R9 158 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 SENP2Q9HC62 589 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 FAM217BQ9NTX9 383 aaPredicted RBP12.85□□□□□ -0.35
VTI1A-204ENST00000480057 RBM28Q9NW13 759 aaKnown RBP12.85□□□□□ -0.35
VTI1A-204ENST00000480057 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 MYH1P12882 1939 aa12.85□□□□□ -0.35
VTI1A-204ENST00000480057 ECM29Q5VYK3 1845 aa12.84□□□□□ -0.35
VTI1A-204ENST00000480057 SCN9AQ15858 1988 aa12.84□□□□□ -0.35
VTI1A-204ENST00000480057 TSPY2A6NKD2 308 aa12.84□□□□□ -0.35
VTI1A-204ENST00000480057 PPIP5K2O43314 1243 aa12.84□□□□□ -0.35
VTI1A-204ENST00000480057 FMNL1O95466 1100 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-204ENST00000480057 IARSP41252 1262 aaKnown RBP12.84□□□□□ -0.35
VTI1A-204ENST00000480057 CRKP46108 304 aa12.84□□□□□ -0.35
VTI1A-204ENST00000480057 AOC3Q16853 763 aa12.84□□□□□ -0.35
VTI1A-204ENST00000480057 MAPKAPK5Q8IW41 473 aa12.84□□□□□ -0.35
VTI1A-204ENST00000480057 FANCBQ8NB91 859 aa12.84□□□□□ -0.35
VTI1A-204ENST00000480057 C8orf76Q96K31 380 aa12.84□□□□□ -0.35
VTI1A-204ENST00000480057 SCAND2PQ9GZW5 306 aaPredicted RBP12.84□□□□□ -0.35
VTI1A-204ENST00000480057 CFAP45Q9UL16 551 aa12.84□□□□□ -0.35
VTI1A-204ENST00000480057 BRCA1P38398 1863 aaKnown RBP12.84□□□□□ -0.35
VTI1A-204ENST00000480057 CDC27P30260 824 aa12.83□□□□□ -0.36
VTI1A-204ENST00000480057 ADD1P35611 737 aaKnown RBP12.83□□□□□ -0.36
VTI1A-204ENST00000480057 UBE2HP62256 183 aa12.83□□□□□ -0.36
VTI1A-204ENST00000480057 DNM1Q05193 864 aaKnown RBP12.83□□□□□ -0.36
VTI1A-204ENST00000480057 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
VTI1A-204ENST00000480057 USP48Q86UV5 1035 aa12.83□□□□□ -0.36
VTI1A-204ENST00000480057 TRIM22Q8IYM9 498 aa12.83□□□□□ -0.36
VTI1A-204ENST00000480057 ZNF444Q8N0Y2 327 aaPredicted RBP12.83□□□□□ -0.36
VTI1A-204ENST00000480057 FBXO18Q8NFZ0 1043 aa12.83□□□□□ -0.36
VTI1A-204ENST00000480057 ZKSCAN3Q9BRR0 538 aa12.83□□□□□ -0.36
VTI1A-204ENST00000480057 MKNK2Q9HBH9 465 aa12.83□□□□□ -0.36
VTI1A-204ENST00000480057 SWAP70Q9UH65 585 aa12.83□□□□□ -0.36
VTI1A-204ENST00000480057 CD2APQ9Y5K6 639 aa12.83□□□□□ -0.36
VTI1A-204ENST00000480057 MYH15Q9Y2K3 1946 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms