RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-206	ENST00000479994	OSBP2	Q969R2	916 aa		13.75	□□□□□ -0.21
HCLS1-206	ENST00000479994	STRBP	Q96SI9	672 aa	Known RBP	13.75	□□□□□ -0.21
HCLS1-206	ENST00000479994	CFHR5	Q9BXR6	569 aa		13.75	□□□□□ -0.21
HCLS1-206	ENST00000479994	MYOZ2	Q9NPC6	264 aa		13.75	□□□□□ -0.21
HCLS1-206	ENST00000479994	ANO2	Q9NQ90	1003 aa		13.75	□□□□□ -0.21
HCLS1-206	ENST00000479994	PTPN22	Q9Y2R2	807 aa		13.75	□□□□□ -0.21
HCLS1-206	ENST00000479994	DAGLA	Q9Y4D2	1042 aa		13.75	□□□□□ -0.21
HCLS1-206	ENST00000479994	TNFAIP1	Q13829	316 aa		13.74	□□□□□ -0.21
HCLS1-206	ENST00000479994	CFAP100	Q494V2	611 aa		13.74	□□□□□ -0.21
HCLS1-206	ENST00000479994	SAMD7	Q7Z3H4	446 aa		13.74	□□□□□ -0.21
HCLS1-206	ENST00000479994	RIOK1	Q9BRS2	568 aa	Known RBP	13.74	□□□□□ -0.21
HCLS1-206	ENST00000479994	PUS7L	Q9H0K6	701 aa	Known RBP	13.74	□□□□□ -0.21
HCLS1-206	ENST00000479994	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
HCLS1-206	ENST00000479994	COL2A1	P02458	1487 aa	Predicted RBP	13.74	□□□□□ -0.21
HCLS1-206	ENST00000479994	SPDYE2B	A6NHP3	402 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994		M0R2C6	588 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	EGFR	P00533	1210 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	APP	P05067	770 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	SLC3A2	P08195	630 aa	Known RBP	13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	SPDYE6	P0CI01	402 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	PC	P11498	1178 aa	Known RBP	13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	ZKSCAN1	P17029	563 aa	Predicted RBP	13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	USP5	P45974	858 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	TNNI2	P48788	182 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	DIXDC1	Q155Q3	683 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	MICALL2	Q8IY33	904 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	TEX11	Q8IYF3	940 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	ZNF384	Q8TF68	577 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	MAP4K1	Q92918	833 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	SLC4A4	Q9Y6R1	1079 aa		13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	DDX60L	Q5H9U9	1706 aa	Known RBP	13.73	□□□□□ -0.21
HCLS1-206	ENST00000479994	HSPD1	P10809	573 aa	Known RBP	13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	ANAPC15	P60006	121 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	KRT32	Q14532	448 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	DEFB123	Q8N688	67 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	MIGA1	Q8NAN2	632 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	DCPS	Q96C86	337 aa	Known RBP	13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	HOOK2	Q96ED9	719 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	MXD3	Q9BW11	206 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	IDI2	Q9BXS1	227 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	NAPB	Q9H115	298 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	DHX36	Q9H2U1	1008 aa	Known RBP	13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	ZNF287	Q9HBT7	754 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	USP40	Q9NVE5	1235 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	RAPGEFL1	Q9UHV5	662 aa		13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.72	□□□□□ -0.21
HCLS1-206	ENST00000479994		A0A1W2PPC1	479 aa		13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	ENTPD3	O75355	529 aa		13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	TDO2	P48775	406 aa		13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	GRIK5	Q16478	980 aa		13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	IMMT	Q16891	758 aa	Known RBP	13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	ADGRA1	Q86SQ6	560 aa		13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	LCORL	Q8N3X6	602 aa		13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	DPF3	Q92784	378 aa		13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	CDCA5	Q96FF9	252 aa		13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	ZNF333	Q96JL9	665 aa		13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	LSG1	Q9H089	658 aa	Known RBP	13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	ARMT1	Q9H993	441 aa		13.71	□□□□□ -0.21
HCLS1-206	ENST00000479994	TTC28	Q96AY4	2481 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	PLA2G5	P39877	138 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	KIF4B	Q2VIQ3	1234 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	SPDYE2	Q495Y8	402 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	SBK1	Q52WX2	424 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994		Q7L0L9	218 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	TTC6	Q86TZ1	520 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	FAM83A	Q86UY5	434 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	IFNL3	Q8IZI9	196 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	ZBED3	Q96IU2	234 aa	Predicted RBP	13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	SEC62	Q99442	399 aa	Known RBP	13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	USP26	Q9BXU7	913 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	RNF41	Q9H4P4	317 aa	Predicted RBP	13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	PPP2R3B	Q9Y5P8	575 aa		13.7	□□□□□ -0.22
HCLS1-206	ENST00000479994	ZNF213	O14771	459 aa		13.69	□□□□□ -0.22
HCLS1-206	ENST00000479994	RHBDL3	P58872	404 aa		13.69	□□□□□ -0.22
HCLS1-206	ENST00000479994	CDC42EP5	Q6NZY7	148 aa		13.69	□□□□□ -0.22
HCLS1-206	ENST00000479994	MOB2	Q70IA6	237 aa		13.69	□□□□□ -0.22
HCLS1-206	ENST00000479994	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.69	□□□□□ -0.22
HCLS1-206	ENST00000479994	GSG1L2	A8MUP6	293 aa		13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	WNT10B	O00744	389 aa		13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	HLA-DOA	P06340	250 aa		13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	HMGB1	P09429	215 aa	Known RBP	13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	HSPA4	P34932	840 aa		13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	RBM25	P49756	843 aa	Known RBP	13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	DYNLL1	P63167	89 aa	Known RBP	13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	CCDC129	Q6ZRS4	1044 aa		13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	PRMT6	Q96LA8	375 aa	Predicted RBP	13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	C22orf23	Q9BZE7	217 aa		13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	CNNM2	Q9H8M5	875 aa		13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	ANAPC4	Q9UJX5	808 aa		13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	RBM8A	Q9Y5S9	174 aa	Known RBP	13.68	□□□□□ -0.22
HCLS1-206	ENST00000479994	FLT1	P17948	1338 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	FGA	P02671	866 aa		13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	POLR3D	P05423	398 aa	Predicted RBP	13.67	□□□□□ -0.22
HCLS1-206	ENST00000479994	PSMA5	P28066	241 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms