RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
DDX56-211ENST00000479602 GPR75-ASB3A0A0A6YYF3 556 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 TBC1D12O60347 775 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 PDE1AP54750 535 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 RHBDL3P58872 404 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 UBE2Q1Q7Z7E8 422 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 NBPF11Q86T75 865 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 CCDC136Q96JN2 1154 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 TRIM47Q96LD4 638 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 NEUROD6Q96NK8 337 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 DDX4Q9NQI0 724 aaKnown RBP10.81□□□□□ -0.68
DDX56-211ENST00000479602 TAOK2Q9UL54 1235 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 AFG3L2Q9Y4W6 797 aa10.81□□□□□ -0.68
DDX56-211ENST00000479602 A0A0G2JLL6 359 aaPredicted RBP10.8□□□□□ -0.68
DDX56-211ENST00000479602 DDTLA6NHG4 134 aaPredicted RBP10.8□□□□□ -0.68
DDX56-211ENST00000479602 PDHXO00330 501 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 PTPRAP18433 802 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 RGS3P49796 1198 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 TCP10Q12799 353 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 HABP4Q5JVS0 413 aaKnown RBP10.8□□□□□ -0.68
DDX56-211ENST00000479602 TTC39AQ5SRH9 613 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 GORABQ5T7V8 394 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 ANKRD45Q5TZF3 282 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 PRRT2Q7Z6L0 340 aaPredicted RBP10.8□□□□□ -0.68
DDX56-211ENST00000479602 PLEKHM2Q8IWE5 1019 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 SLF2Q8IX21 1173 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 SRRDQ9UH36 339 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 SLC45A1Q9Y2W3 748 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 LAMA3Q16787 3333 aa10.8□□□□□ -0.68
DDX56-211ENST00000479602 SLURP2P0DP57 97 aa10.79□□□□□ -0.68
DDX56-211ENST00000479602 LRRFIP1Q32MZ4 808 aaKnown RBP10.79□□□□□ -0.68
DDX56-211ENST00000479602 SLC9C1Q4G0N8 1177 aa10.79□□□□□ -0.68
DDX56-211ENST00000479602 TMEM106CQ9BVX2 250 aa10.79□□□□□ -0.68
DDX56-211ENST00000479602 CCDC8Q9H0W5 538 aaPredicted RBP10.79□□□□□ -0.68
DDX56-211ENST00000479602 CPA4Q9UI42 421 aa10.79□□□□□ -0.68
DDX56-211ENST00000479602 RBBP6Q7Z6E9 1792 aaKnown RBP10.79□□□□□ -0.68
DDX56-211ENST00000479602 FOCADQ5VW36 1801 aa10.79□□□□□ -0.68
DDX56-211ENST00000479602 CTNND1O60716 968 aaKnown RBP10.78□□□□□ -0.68
DDX56-211ENST00000479602 CYP2E1P05181 493 aaPredicted RBP10.78□□□□□ -0.68
DDX56-211ENST00000479602 ZFYP08048 801 aaPredicted RBP10.78□□□□□ -0.68
DDX56-211ENST00000479602 OSBPP22059 807 aa10.78□□□□□ -0.68
DDX56-211ENST00000479602 PSMC4P43686 418 aa10.78□□□□□ -0.68
DDX56-211ENST00000479602 UBE3CQ15386 1083 aa10.78□□□□□ -0.68
DDX56-211ENST00000479602 SCYL3Q8IZE3 742 aa10.78□□□□□ -0.68
DDX56-211ENST00000479602 KBTBD3Q8NAB2 608 aa10.78□□□□□ -0.68
DDX56-211ENST00000479602 SH3TC2Q8TF17 1288 aa10.78□□□□□ -0.68
DDX56-211ENST00000479602 NSUN4Q96CB9 384 aaKnown RBP10.78□□□□□ -0.68
DDX56-211ENST00000479602 SHISA4Q96DD7 197 aa10.78□□□□□ -0.68
DDX56-211ENST00000479602 ZHX2Q9Y6X8 837 aa10.78□□□□□ -0.68
DDX56-211ENST00000479602 DDX60LQ5H9U9 1706 aaKnown RBP10.78□□□□□ -0.68
DDX56-211ENST00000479602 SMARCA5O60264 1052 aaPredicted RBP10.77□□□□□ -0.69
DDX56-211ENST00000479602 CYP2C8P10632 490 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 PDE4AP27815 886 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 PPP4CP60510 307 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 GSTO1P78417 241 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 MECOMQ03112 1051 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 MTFR1Q15390 333 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 BMP2KLQ5H9B9 411 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 ZSCAN25Q6NSZ9 544 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 METTL16Q86W50 562 aaKnown RBP10.77□□□□□ -0.69
DDX56-211ENST00000479602 EVI5LQ96CN4 794 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 LNPKQ9C0E8 428 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 PAG1Q9NWQ8 432 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 MYH2Q9UKX2 1941 aa10.77□□□□□ -0.69
DDX56-211ENST00000479602 AK9Q5TCS8 1911 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 LDHCP07864 332 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 GJB1P08034 283 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 BTDP43251 543 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 GJA8P48165 433 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 MAP3K12Q12852 859 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 RRP1BQ14684 758 aaKnown RBP10.76□□□□□ -0.69
DDX56-211ENST00000479602 KIF22Q14807 665 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 ERICH6Q7L0X2 663 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 FASTKD5Q7L8L6 764 aaKnown RBP10.76□□□□□ -0.69
DDX56-211ENST00000479602 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.76□□□□□ -0.699e-8■■■□□ 18
DDX56-211ENST00000479602 PRO3102Q9H379 93 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 SNRKQ9NRH2 765 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 MROH7-TTC4A0A0A0MT08 1334 aa10.76□□□□□ -0.69
DDX56-211ENST00000479602 MYO5AQ9Y4I1 1855 aaKnown RBP10.76□□□□□ -0.69
DDX56-211ENST00000479602 PLCG2P16885 1265 aa10.75□□□□□ -0.69
DDX56-211ENST00000479602 HOXD10P28358 340 aa10.75□□□□□ -0.69
DDX56-211ENST00000479602 GRK4P32298 578 aa10.75□□□□□ -0.69
DDX56-211ENST00000479602 ZAP70P43403 619 aa10.75□□□□□ -0.69
DDX56-211ENST00000479602 FXR1P51114 621 aaKnown RBP eCLIP10.75□□□□□ -0.69
DDX56-211ENST00000479602 TTC22Q5TAA0 569 aa10.75□□□□□ -0.69
DDX56-211ENST00000479602 PI16Q6UXB8 463 aa10.75□□□□□ -0.69
DDX56-211ENST00000479602 TBC1D9Q6ZT07 1266 aa10.75□□□□□ -0.69
DDX56-211ENST00000479602 OTUD7AQ8TE49 926 aaPredicted RBP10.75□□□□□ -0.69
DDX56-211ENST00000479602 PARK7Q99497 189 aaKnown RBP10.75□□□□□ -0.69
DDX56-211ENST00000479602 ABCF2Q9UG63 623 aa10.75□□□□□ -0.69
DDX56-211ENST00000479602 RAD50Q92878 1312 aa10.75□□□□□ -0.69
DDX56-211ENST00000479602 TCRBV5S4A2TA0A5A2 114 aa10.74□□□□□ -0.69
DDX56-211ENST00000479602 APBB1O00213 710 aa10.74□□□□□ -0.69
DDX56-211ENST00000479602 HIP1O00291 1037 aa10.74□□□□□ -0.69
DDX56-211ENST00000479602 ADD2P35612 726 aa10.74□□□□□ -0.69
DDX56-211ENST00000479602 PRKCZQ05513 592 aa10.74□□□□□ -0.69
DDX56-211ENST00000479602 IRF5Q13568 498 aa10.74□□□□□ -0.69
DDX56-211ENST00000479602 SH3D19Q5HYK7 790 aa10.74□□□□□ -0.69
DDX56-211ENST00000479602 PXYLP1Q8TE99 480 aa10.74□□□□□ -0.69
DDX56-211ENST00000479602 GABRQQ9UN88 632 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms