RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 SUSD4Q5VX71 490 aa28.29■■■□□ 2.12
SYNGAP1-206ENST00000479510 VSTM4Q8IW00 320 aa28.29■■■□□ 2.12
SYNGAP1-206ENST00000479510 DIS3L2Q8IYB7 885 aaKnown RBP28.29■■■□□ 2.12
SYNGAP1-206ENST00000479510 STK11IPQ8N1F8 1099 aa28.29■■■□□ 2.12
SYNGAP1-206ENST00000479510 ZNF397Q8NF99 534 aaPredicted RBP28.29■■■□□ 2.12
SYNGAP1-206ENST00000479510 TACC3Q9Y6A5 838 aa28.29■■■□□ 2.12
SYNGAP1-206ENST00000479510 SLC4A4Q9Y6R1 1079 aa28.29■■■□□ 2.12
SYNGAP1-206ENST00000479510 SERPINC1P01008 464 aa28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 ATP1A3P13637 1013 aa28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 KANK3Q6NY19 840 aa28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 CRACR2BQ8N4Y2 399 aaPredicted RBP28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 TRIML1Q8N9V2 468 aa28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 TMX1Q9H3N1 280 aa28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 PCDHA5Q9Y5H7 936 aa28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 STRCQ7RTU9 1775 aa28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 ZSCAN20P17040 1043 aaPredicted RBP28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 IGHMBP2P38935 993 aaKnown RBP28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 INCENPQ9NQS7 918 aa28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 FBXO2Q9UK22 296 aaPredicted RBP28.28■■■□□ 2.12
SYNGAP1-206ENST00000479510 TOB1P50616 345 aaPredicted RBP28.27■■■□□ 2.12
SYNGAP1-206ENST00000479510 DMTNQ08495 405 aa28.27■■■□□ 2.12
SYNGAP1-206ENST00000479510 LCORLQ8N3X6 602 aa28.27■■■□□ 2.12
SYNGAP1-206ENST00000479510 ANAPC4Q9UJX5 808 aa28.27■■■□□ 2.12
SYNGAP1-206ENST00000479510 BTBD18B2RXH4 712 aa28.27■■■□□ 2.12
SYNGAP1-206ENST00000479510 MLKLQ8NB16 471 aa28.27■■■□□ 2.12
SYNGAP1-206ENST00000479510 FOXP4Q8IVH2 680 aaPredicted RBP28.26■■■□□ 2.11
SYNGAP1-206ENST00000479510 CCDC87Q9NVE4 849 aa28.26■■■□□ 2.11
SYNGAP1-206ENST00000479510 DDX41Q9UJV9 622 aaKnown RBP28.26■■■□□ 2.11
SYNGAP1-206ENST00000479510 CFAP100Q494V2 611 aa28.25■■■□□ 2.11
SYNGAP1-206ENST00000479510 CT47A1Q5JQC4 288 aaPredicted RBP28.25■■■□□ 2.11
SYNGAP1-206ENST00000479510 ISM2Q6H9L7 571 aa28.25■■■□□ 2.11
SYNGAP1-206ENST00000479510 FANCBQ8NB91 859 aa28.25■■■□□ 2.11
SYNGAP1-206ENST00000479510 ZNF335Q9H4Z2 1342 aaPredicted RBP28.25■■■□□ 2.11
SYNGAP1-206ENST00000479510 LAMB2P55268 1798 aa28.25■■■□□ 2.11
SYNGAP1-206ENST00000479510 POSTNQ15063 836 aa28.25■■■□□ 2.11
SYNGAP1-206ENST00000479510 SRPRBQ9Y5M8 271 aaKnown RBP28.25■■■□□ 2.11
SYNGAP1-206ENST00000479510 PHLPP2Q6ZVD8 1323 aa28.25■■■□□ 2.11
SYNGAP1-206ENST00000479510 RREB1Q92766 1687 aa28.24■■■□□ 2.11
SYNGAP1-206ENST00000479510 SARSP49591 514 aaKnown RBP28.24■■■□□ 2.11
SYNGAP1-206ENST00000479510 INTS5Q6P9B9 1019 aaKnown RBP28.24■■■□□ 2.11
SYNGAP1-206ENST00000479510 CDCA7Q9BWT1 371 aaPredicted RBP28.24■■■□□ 2.11
SYNGAP1-206ENST00000479510 PRKAB2O43741 272 aa28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 TOP1P11387 765 aaKnown RBP28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 GUCY1A2P33402 732 aa28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 CCDC93Q567U6 631 aa28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 ZNF654Q8IZM8 581 aa28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 CDC5LQ99459 802 aaKnown RBP28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 RNF26Q9BY78 433 aaPredicted RBP28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 ETF1P62495 437 aaKnown RBP28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 PPARAQ07869 468 aa28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 ENOX1Q8TC92 643 aaKnown RBP28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 SYTL4Q96C24 671 aaPredicted RBP28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 CCDC34Q96HJ3 373 aa28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 UBAC1Q9BSL1 405 aa28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 FANCLQ9NW38 375 aa28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 LRP2BPQ9P2M1 347 aa28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 WNK3Q9BYP7 1800 aa28.23■■■□□ 2.11
SYNGAP1-206ENST00000479510 BCAMP50895 628 aa28.22■■■□□ 2.11
SYNGAP1-206ENST00000479510 NAA30Q147X3 362 aaPredicted RBP28.22■■■□□ 2.11
SYNGAP1-206ENST00000479510 RRP12Q5JTH9 1297 aaKnown RBP28.22■■■□□ 2.11
SYNGAP1-206ENST00000479510 DPF2Q92785 391 aa28.22■■■□□ 2.11
SYNGAP1-206ENST00000479510 SEC31BQ9NQW1 1179 aa28.22■■■□□ 2.11
SYNGAP1-206ENST00000479510 MAN1B1Q9UKM7 699 aa28.22■■■□□ 2.11
SYNGAP1-206ENST00000479510 PRDM4Q9UKN5 801 aa28.22■■■□□ 2.11
SYNGAP1-206ENST00000479510 CICQ96RK0 1608 aaPredicted RBP28.22■■■□□ 2.11
SYNGAP1-206ENST00000479510 ESR2Q92731 530 aa28.22■■■□□ 2.11
SYNGAP1-206ENST00000479510 TOMM22Q9NS69 142 aa28.22■■■□□ 2.11
SYNGAP1-206ENST00000479510 CAMTA2O94983 1202 aa28.21■■■□□ 2.11
SYNGAP1-206ENST00000479510 PCP11498 1178 aaKnown RBP28.21■■■□□ 2.11
SYNGAP1-206ENST00000479510 XBP1P17861 261 aa28.21■■■□□ 2.11
SYNGAP1-206ENST00000479510 MORC3Q14149 939 aa28.21■■■□□ 2.11
SYNGAP1-206ENST00000479510 SMARCE1Q969G3 411 aa28.21■■■□□ 2.11
SYNGAP1-206ENST00000479510 BCL9LQ86UU0 1499 aa28.21■■■□□ 2.11
SYNGAP1-206ENST00000479510 ZNF804BA4D1E1 1349 aa28.2■■■□□ 2.11
SYNGAP1-206ENST00000479510 SPDYE4A6NLX3 237 aa28.2■■■□□ 2.11
SYNGAP1-206ENST00000479510 UBE2Q2LH0YL09 131 aa28.2■■■□□ 2.11
SYNGAP1-206ENST00000479510 ZSCAN12O43309 604 aa28.2■■■□□ 2.11
SYNGAP1-206ENST00000479510 PHLPP1O60346 1717 aa28.2■■■□□ 2.11
SYNGAP1-206ENST00000479510 BMP6P22004 513 aa28.2■■■□□ 2.11
SYNGAP1-206ENST00000479510 KCNJ14Q9UNX9 436 aa28.2■■■□□ 2.11
SYNGAP1-206ENST00000479510 ARHGAP6O43182 974 aa28.2■■■□□ 2.1
SYNGAP1-206ENST00000479510 SEC23AQ15436 765 aa28.2■■■□□ 2.1
SYNGAP1-206ENST00000479510 SYT10Q6XYQ8 523 aa28.2■■■□□ 2.1
SYNGAP1-206ENST00000479510 GNL3LQ9NVN8 582 aaKnown RBP28.2■■■□□ 2.1
SYNGAP1-206ENST00000479510 NTSR2O95665 410 aa28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 BMP15O95972 392 aa28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 ZNF18P17022 549 aa28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 TBX2Q13207 712 aaPredicted RBP28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 SPATA20Q8TB22 786 aa28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 PKNOX2Q96KN3 472 aa28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 SRRTQ9BXP5 876 aaKnown RBP28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 DOT1LQ8TEK3 1739 aa28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 COL22A1Q8NFW1 1626 aaPredicted RBP28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 GOLGA6L9A6NEM1 432 aa28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 POLR2DO15514 142 aaKnown RBP28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 CHRNDQ07001 517 aa28.19■■■□□ 2.1
SYNGAP1-206ENST00000479510 CYP7A1P22680 504 aa28.18■■■□□ 2.1
SYNGAP1-206ENST00000479510 ERCC5P28715 1186 aaPredicted RBP28.18■■■□□ 2.1
SYNGAP1-206ENST00000479510 PDE4BQ07343 736 aa28.18■■■□□ 2.1
SYNGAP1-206ENST00000479510 SNAP23O00161 211 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms