RNA–Protein interactions for RNA: ENST00000478862.1

NCK1-206, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-206ENST00000478862 KIF4BQ2VIQ3 1234 aa6.38□□□□□ -1.39
NCK1-206ENST00000478862 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.38□□□□□ -1.39
NCK1-206ENST00000478862 MRRFQ96E11 262 aaKnown RBP6.38□□□□□ -1.39
NCK1-206ENST00000478862 DUSP23Q9BVJ7 150 aa6.38□□□□□ -1.39
NCK1-206ENST00000478862 SRCIN1Q9C0H9 1055 aa6.38□□□□□ -1.39
NCK1-206ENST00000478862 C12orf49Q9H741 205 aa6.38□□□□□ -1.39
NCK1-206ENST00000478862 DISC1Q9NRI5 854 aa6.38□□□□□ -1.39
NCK1-206ENST00000478862 MBNL3Q9NUK0 354 aaKnown RBP6.38□□□□□ -1.39
NCK1-206ENST00000478862 TMEM39AQ9NV64 488 aa6.38□□□□□ -1.39
NCK1-206ENST00000478862 CARMIL2Q6F5E8 1435 aa6.37□□□□□ -1.39
NCK1-206ENST00000478862 XRCC5P13010 732 aaKnown RBP6.37□□□□□ -1.39
NCK1-206ENST00000478862 SLC23A3Q6PIS1 610 aa6.37□□□□□ -1.39
NCK1-206ENST00000478862 WDR89Q96FK6 387 aaPredicted RBP6.37□□□□□ -1.39
NCK1-206ENST00000478862 KIAA1522Q9P206 1035 aaPredicted RBP6.37□□□□□ -1.39
NCK1-206ENST00000478862 VTI1BQ9UEU0 232 aa6.37□□□□□ -1.39
NCK1-206ENST00000478862 GTF2IRD1Q9UHL9 959 aa6.37□□□□□ -1.39
NCK1-206ENST00000478862 SNX11Q9Y5W9 270 aa6.37□□□□□ -1.39
NCK1-206ENST00000478862 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.37□□□□□ -1.39
NCK1-206ENST00000478862 E9PSI1 815 aa6.36□□□□□ -1.39
NCK1-206ENST00000478862 ITIH2P19823 946 aa6.36□□□□□ -1.39
NCK1-206ENST00000478862 FCGRTP55899 365 aa6.36□□□□□ -1.39
NCK1-206ENST00000478862 MRPL58Q14197 206 aaKnown RBP6.36□□□□□ -1.39
NCK1-206ENST00000478862 NPM2Q86SE8 214 aaKnown RBP6.36□□□□□ -1.39
NCK1-206ENST00000478862 LRRN4CLQ8ND94 238 aa6.36□□□□□ -1.39
NCK1-206ENST00000478862 ASB11Q8WXH4 323 aa6.36□□□□□ -1.39
NCK1-206ENST00000478862 EMILIN2Q9BXX0 1053 aa6.36□□□□□ -1.39
NCK1-206ENST00000478862 PICK1Q9NRD5 415 aa6.36□□□□□ -1.39
NCK1-206ENST00000478862 FAM8A1Q9UBU6 413 aa6.36□□□□□ -1.39
NCK1-206ENST00000478862 LRRC10BA6NIK2 292 aa6.35□□□□□ -1.39
NCK1-206ENST00000478862 ZNF862O60290 1169 aa6.35□□□□□ -1.39
NCK1-206ENST00000478862 GSTT1P30711 240 aa6.35□□□□□ -1.39
NCK1-206ENST00000478862 OXCT1P55809 520 aa6.35□□□□□ -1.39
NCK1-206ENST00000478862 WFDC3Q8IUB2 231 aa6.35□□□□□ -1.39
NCK1-206ENST00000478862 TOP6BLQ8N6T0 577 aa6.35□□□□□ -1.39
NCK1-206ENST00000478862 ACSBG1Q96GR2 724 aa6.35□□□□□ -1.39
NCK1-206ENST00000478862 FAM84AQ96KN4 292 aa6.35□□□□□ -1.39
NCK1-206ENST00000478862 ADAMTS6Q9UKP5 1117 aa6.35□□□□□ -1.39
NCK1-206ENST00000478862 LEFTY1O75610 366 aa6.34□□□□□ -1.39
NCK1-206ENST00000478862 USP17L7P0C7H9 530 aa6.34□□□□□ -1.39
NCK1-206ENST00000478862 VAMP1P23763 118 aa6.34□□□□□ -1.39
NCK1-206ENST00000478862 CD96P40200 585 aa6.34□□□□□ -1.39
NCK1-206ENST00000478862 FAAP100Q0VG06 881 aa6.34□□□□□ -1.39
NCK1-206ENST00000478862 IKZF1Q13422 519 aa6.34□□□□□ -1.39
NCK1-206ENST00000478862 KCNMB1Q16558 191 aa6.34□□□□□ -1.39
NCK1-206ENST00000478862 ZSWIM9Q86XI8 627 aa6.34□□□□□ -1.39
NCK1-206ENST00000478862 BHLHE22Q8NFJ8 381 aaPredicted RBP6.34□□□□□ -1.39
NCK1-206ENST00000478862 AKAP2Q9Y2D5 859 aa6.34□□□□□ -1.39
NCK1-206ENST00000478862 GNAT3A8MTJ3 354 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 CTSHP09668 335 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 ARNTP27540 789 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 ERVK-24P63145 666 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 TSNAXIP1Q2TAA8 658 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 FBLN7Q53RD9 439 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 SULF2Q8IWU5 870 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 RNF214Q8ND24 703 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 C3orf58Q8NDZ4 430 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 FLAD1Q8NFF5 587 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 ISL2Q96A47 359 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 BACH2Q9BYV9 841 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 SAMM50Q9Y512 469 aa6.33□□□□□ -1.4
NCK1-206ENST00000478862 MAP1SQ66K74 1059 aaPredicted RBP6.32□□□□□ -1.4
NCK1-206ENST00000478862 CDC37L1Q7L3B6 337 aa6.32□□□□□ -1.4
NCK1-206ENST00000478862 CRELD1Q96HD1 420 aa6.32□□□□□ -1.4
NCK1-206ENST00000478862 PPP1R16BQ96T49 567 aa6.32□□□□□ -1.4
NCK1-206ENST00000478862 CBX8Q9HC52 389 aa6.32□□□□□ -1.4
NCK1-206ENST00000478862 PCDHGC5Q9Y5F6 944 aa6.32□□□□□ -1.4
NCK1-206ENST00000478862 IGF2BP3O00425 579 aaKnown RBP eCLIP6.31□□□□□ -1.4
NCK1-206ENST00000478862 NME2P22392 152 aa6.31□□□□□ -1.4
NCK1-206ENST00000478862 AFMP43652 599 aa6.31□□□□□ -1.4
NCK1-206ENST00000478862 ZP2Q05996 745 aa6.31□□□□□ -1.4
NCK1-206ENST00000478862 TAF1CQ15572 869 aaPredicted RBP6.31□□□□□ -1.4
NCK1-206ENST00000478862 ZC3H12AQ5D1E8 599 aaKnown RBP6.31□□□□□ -1.4
NCK1-206ENST00000478862 TMEM87AQ8NBN3 555 aa6.31□□□□□ -1.4
NCK1-206ENST00000478862 TOX2Q96NM4 488 aa6.31□□□□□ -1.4
NCK1-206ENST00000478862 TNKS2Q9H2K2 1166 aa6.31□□□□□ -1.4
NCK1-206ENST00000478862 PRDM10Q9NQV6 1147 aa6.31□□□□□ -1.4
NCK1-206ENST00000478862 PLAGL2Q9UPG8 496 aa6.31□□□□□ -1.4
NCK1-206ENST00000478862 NEFMP07197 916 aa6.3□□□□□ -1.4
NCK1-206ENST00000478862 RAP1GAPP47736 663 aa6.3□□□□□ -1.4
NCK1-206ENST00000478862 MLANAQ16655 118 aa6.3□□□□□ -1.4
NCK1-206ENST00000478862 LDLRAD1Q5T700 205 aa6.3□□□□□ -1.4
NCK1-206ENST00000478862 MEI1Q5TIA1 1274 aa6.3□□□□□ -1.4
NCK1-206ENST00000478862 PDZD3Q86UT5 571 aa6.3□□□□□ -1.4
NCK1-206ENST00000478862 KCT2Q8NC54 265 aa6.3□□□□□ -1.4
NCK1-206ENST00000478862 PPM1HQ9ULR3 514 aa6.3□□□□□ -1.4
NCK1-206ENST00000478862 USP31Q70CQ4 1352 aa6.3□□□□□ -1.4
NCK1-206ENST00000478862 RECKO95980 971 aa6.29□□□□□ -1.4
NCK1-206ENST00000478862 CLCN7P51798 805 aa6.29□□□□□ -1.4
NCK1-206ENST00000478862 MPZL3Q6UWV2 235 aa6.29□□□□□ -1.4
NCK1-206ENST00000478862 ZSCAN18Q8TBC5 510 aaPredicted RBP6.29□□□□□ -1.4
NCK1-206ENST00000478862 TTF2Q9UNY4 1162 aaKnown RBP6.29□□□□□ -1.4
NCK1-206ENST00000478862 FBXO24O75426 580 aa6.28□□□□□ -1.4
NCK1-206ENST00000478862 ST13P50502 369 aaKnown RBP6.28□□□□□ -1.4
NCK1-206ENST00000478862 TPTE2Q6XPS3 522 aa6.28□□□□□ -1.4
NCK1-206ENST00000478862 GPBAR1Q8TDU6 330 aa6.28□□□□□ -1.4
NCK1-206ENST00000478862 ANKRD24Q8TF21 1146 aa6.28□□□□□ -1.4
NCK1-206ENST00000478862 CCDC120Q96HB5 630 aa6.28□□□□□ -1.4
NCK1-206ENST00000478862 CEP44Q9C0F1 390 aa6.28□□□□□ -1.4
NCK1-206ENST00000478862 PRDM5Q9NQX1 630 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms