RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SLC10A4Q96EP9 437 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 ZIC5Q96T25 663 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 TRIM34Q9BYJ4 488 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 M0R2C6 588 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 TULP1O00294 542 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-215ENST00000478531 PRKAB2O43741 272 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 HLA-DOAP06340 250 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 INPP5BP32019 993 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 NOGQ13253 232 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-215ENST00000478531 CRACR2BQ8N4Y2 399 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-215ENST00000478531 APPBP2Q92624 585 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 SEC62Q99442 399 aaKnown RBP8.3□□□□□ -1.08
BRCA1-215ENST00000478531 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.3□□□□□ -1.08
BRCA1-215ENST00000478531 SLC4A4Q9Y6R1 1079 aa8.3□□□□□ -1.08
BRCA1-215ENST00000478531 PHIPQ8WWQ0 1821 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 GPAA1O43292 621 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 POLR3DP05423 398 aaPredicted RBP8.29□□□□□ -1.08
BRCA1-215ENST00000478531 MAP3K9P80192 1104 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 HOMEZQ8IX15 550 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 JMYQ8N9B5 988 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 OPTNQ96CV9 577 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 OTUD5Q96G74 571 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 WNK4Q96J92 1243 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 DHX36Q9H2U1 1008 aaKnown RBP8.29□□□□□ -1.08
BRCA1-215ENST00000478531 OSBPL3Q9H4L5 887 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 MCM9Q9NXL9 1143 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 PI4KBQ9UBF8 816 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 PTPRFP10586 1907 aa8.29□□□□□ -1.08
BRCA1-215ENST00000478531 KIF23Q02241 960 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-215ENST00000478531 TTC22Q5TAA0 569 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 SPRYD7Q5W111 196 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 CCDC129Q6ZRS4 1044 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 DDRGK1Q96HY6 314 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 DCP1AQ9NPI6 582 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-215ENST00000478531 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-215ENST00000478531 SNCAIPQ9Y6H5 919 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 A0A0D9SFI3 127 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 APPP05067 770 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 CYP2D6P10635 497 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 GSPT1P15170 499 aaKnown RBP8.28□□□□□ -1.08
BRCA1-215ENST00000478531 GJA5P36382 358 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 MAP2K2P36507 400 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 EVX2Q03828 476 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 ZMYM1Q5SVZ6 1142 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 FAM227BQ96M60 508 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 STRBPQ96SI9 672 aaKnown RBP8.28□□□□□ -1.08
BRCA1-215ENST00000478531 BEGAINQ9BUH8 593 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 DNAJC18Q9H819 358 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 PICK1Q9NRD5 415 aa8.28□□□□□ -1.08
BRCA1-215ENST00000478531 HERC5Q9UII4 1024 aaKnown RBP8.28□□□□□ -1.08
BRCA1-215ENST00000478531 CYP2D7A0A087X1C5 515 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 UNCXA6NJT0 531 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 PHF20L1A8MW92 1017 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 GDF11O95390 407 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 HSPA1AP0DMV8 641 aaKnown RBP8.27□□□□□ -1.09
BRCA1-215ENST00000478531 HSPA1BP0DMV9 641 aaKnown RBP8.27□□□□□ -1.09
BRCA1-215ENST00000478531 TDO2P48775 406 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 PLCD1P51178 756 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 MAP2K1Q02750 393 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-215ENST00000478531 NMIQ13287 307 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-215ENST00000478531 TTC6Q86TZ1 520 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 AMOTL1Q8IY63 956 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 DIAPH3Q9NSV4 1193 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 ATP8A2Q9NTI2 1148 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 SERPINB13Q9UIV8 391 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 ZNF112Q9UJU3 913 aa8.27□□□□□ -1.09
BRCA1-215ENST00000478531 SPDYE5A6NIY4 337 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 TBC1D12O60347 775 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 ZBTB48P10074 688 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-215ENST00000478531 SHROOM1Q2M3G4 852 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-215ENST00000478531 CCDC84Q86UT8 332 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-215ENST00000478531 ERO1BQ86YB8 467 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 SCYL3Q8IZE3 742 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 STK11IPQ8N1F8 1099 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 TSKSQ9UJT2 592 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 CENPFP49454 3210 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 GSG1L2A8MUP6 293 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 USP17L12C9JPN9 530 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 USP17L21D6R901 530 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 IRF6O14896 467 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 CTNND1O60716 968 aaKnown RBP8.26□□□□□ -1.09
BRCA1-215ENST00000478531 GNAT2P19087 354 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 SDSP20132 328 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 MAP3K10Q02779 954 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 SREBF2Q12772 1141 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 RRP1BQ14684 758 aaKnown RBP8.26□□□□□ -1.09
BRCA1-215ENST00000478531 NOL9Q5SY16 702 aaKnown RBP8.26□□□□□ -1.09
BRCA1-215ENST00000478531 CWC27Q6UX04 472 aaKnown RBP8.26□□□□□ -1.09
BRCA1-215ENST00000478531 ZNF589Q86UQ0 364 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-215ENST00000478531 SLC44A5Q8NCS7 719 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 DYNLL2Q96FJ2 89 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 EHD4Q9H223 541 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 EPB41L4AQ9HCS5 686 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-215ENST00000478531 PPP4R2Q9NY27 417 aa8.26□□□□□ -1.09
BRCA1-215ENST00000478531 LAMA4Q16363 1823 aa8.25□□□□□ -1.09
BRCA1-215ENST00000478531 MINDY4BA8MYZ0 360 aa8.25□□□□□ -1.09
BRCA1-215ENST00000478531 SMIM22K7EJ46 135 aa8.25□□□□□ -1.09
BRCA1-215ENST00000478531 PTPRAP18433 802 aa8.25□□□□□ -1.09
BRCA1-215ENST00000478531 PPIL2Q13356 520 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms