RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 LEMD3Q9Y2U8 911 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 ERICH3Q5RHP9 1530 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 FAM170BA6NMN3 283 aa6.27□□□□□ -1.41
GPNMB-210ENST00000478451 HCLS1P14317 486 aaPredicted RBP6.27□□□□□ -1.41
GPNMB-210ENST00000478451 HOXA10P31260 410 aaPredicted RBP6.27□□□□□ -1.41
GPNMB-210ENST00000478451 ERVK-24P63145 666 aa6.27□□□□□ -1.41
GPNMB-210ENST00000478451 ZC3H12AQ5D1E8 599 aaKnown RBP6.27□□□□□ -1.41
GPNMB-210ENST00000478451 FBXO33Q7Z6M2 555 aa6.27□□□□□ -1.41
GPNMB-210ENST00000478451 NPM2Q86SE8 214 aaKnown RBP6.27□□□□□ -1.41
GPNMB-210ENST00000478451 SMYD4Q8IYR2 804 aaPredicted RBP6.27□□□□□ -1.41
GPNMB-210ENST00000478451 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
GPNMB-210ENST00000478451 C1GALT1Q9NS00 363 aa6.27□□□□□ -1.41
GPNMB-210ENST00000478451 PARP2Q9UGN5 583 aa6.27□□□□□ -1.41
GPNMB-210ENST00000478451 HMGXB3Q12766 1538 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 RNGTTO60942 597 aaKnown RBP6.26□□□□□ -1.41
GPNMB-210ENST00000478451 NEFMP07197 916 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 FOSL1P15407 271 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 ERCC3P19447 782 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 DAB2P98082 770 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 CYP27A1Q02318 531 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 PSMD2Q13200 908 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 CCDC85BQ15834 202 aaPredicted RBP6.26□□□□□ -1.41
GPNMB-210ENST00000478451 SPOCD1Q6ZMY3 1216 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 RGS22Q8NE09 1264 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 CYP8B1Q9UNU6 501 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 ATAD2BQ9ULI0 1458 aa6.26□□□□□ -1.41
GPNMB-210ENST00000478451 XPCQ01831 940 aaPredicted RBP6.25□□□□□ -1.41
GPNMB-210ENST00000478451 CDK5R2Q13319 367 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 SCARA3Q6AZY7 606 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 TTBK2Q6IQ55 1244 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 ZNF765Q7L2R6 523 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 RNF214Q8ND24 703 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 ISL2Q96A47 359 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 ASIC4Q96FT7 647 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 PCDHA4Q9UN74 947 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 CSADQ9Y600 493 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 CLIP1P30622 1438 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 VPS8Q8N3P4 1428 aa6.25□□□□□ -1.41
GPNMB-210ENST00000478451 DCDC2CA8MYV0 355 aa6.24□□□□□ -1.41
GPNMB-210ENST00000478451 CYP26A1O43174 497 aa6.24□□□□□ -1.41
GPNMB-210ENST00000478451 MSMPQ1L6U9 139 aa6.24□□□□□ -1.41
GPNMB-210ENST00000478451 MEI1Q5TIA1 1274 aa6.24□□□□□ -1.41
GPNMB-210ENST00000478451 DUSP27Q5VZP5 1158 aa6.24□□□□□ -1.41
GPNMB-210ENST00000478451 FAM161BQ96MY7 647 aa6.24□□□□□ -1.41
GPNMB-210ENST00000478451 PCOLCE2Q9UKZ9 415 aa6.24□□□□□ -1.41
GPNMB-210ENST00000478451 FAM87AP0C7U9 286 aa6.23□□□□□ -1.41
GPNMB-210ENST00000478451 TAGLNQ01995 201 aaKnown RBP6.23□□□□□ -1.41
GPNMB-210ENST00000478451 PPM1JQ5JR12 505 aa6.23□□□□□ -1.41
GPNMB-210ENST00000478451 DIEXFQ68CQ4 756 aaKnown RBP6.23□□□□□ -1.41
GPNMB-210ENST00000478451 OGFOD3Q6PK18 319 aa6.23□□□□□ -1.41
GPNMB-210ENST00000478451 TMC4Q7Z404 712 aa6.23□□□□□ -1.41
GPNMB-210ENST00000478451 GAL3ST3Q96A11 431 aa6.23□□□□□ -1.41
GPNMB-210ENST00000478451 LRRC4CQ9HCJ2 640 aa6.23□□□□□ -1.41
GPNMB-210ENST00000478451 SSU72Q9NP77 194 aaKnown RBP6.23□□□□□ -1.41
GPNMB-210ENST00000478451 PICK1Q9NRD5 415 aa6.23□□□□□ -1.41
GPNMB-210ENST00000478451 RUSC2Q8N2Y8 1516 aa6.23□□□□□ -1.41
GPNMB-210ENST00000478451 RPS26P62854 115 aaKnown RBP6.22□□□□□ -1.41
GPNMB-210ENST00000478451 C12orf40Q86WS4 652 aa6.22□□□□□ -1.41
GPNMB-210ENST00000478451 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.22□□□□□ -1.41
GPNMB-210ENST00000478451 ELMO3Q96BJ8 720 aa6.22□□□□□ -1.41
GPNMB-210ENST00000478451 CTSHP09668 335 aa6.21□□□□□ -1.42
GPNMB-210ENST00000478451 LMNB1P20700 586 aa6.21□□□□□ -1.42
GPNMB-210ENST00000478451 NTF4P34130 210 aa6.21□□□□□ -1.42
GPNMB-210ENST00000478451 LIG3P49916 1009 aa6.21□□□□□ -1.42
GPNMB-210ENST00000478451 ST13P50502 369 aaKnown RBP6.21□□□□□ -1.42
GPNMB-210ENST00000478451 PTPN11Q06124 597 aaPredicted RBP6.21□□□□□ -1.42
GPNMB-210ENST00000478451 RING1Q06587 406 aa6.21□□□□□ -1.42
GPNMB-210ENST00000478451 MAP3K11Q16584 847 aa6.21□□□□□ -1.42
GPNMB-210ENST00000478451 CYP27C1Q4G0S4 372 aa6.21□□□□□ -1.42
GPNMB-210ENST00000478451 ZBTB37Q5TC79 503 aa6.21□□□□□ -1.42
GPNMB-210ENST00000478451 LRFN4Q6PJG9 635 aa6.21□□□□□ -1.42
GPNMB-210ENST00000478451 MRS2Q9HD23 443 aa6.21□□□□□ -1.42
GPNMB-210ENST00000478451 PRAMEF27A3QJZ7 478 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 DBX1A6NMT0 343 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 FANCGO15287 622 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 SORBS3O60504 671 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 SEPT6Q14141 434 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 INPP5AQ14642 412 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 TAF1CQ15572 869 aaPredicted RBP6.2□□□□□ -1.42
GPNMB-210ENST00000478451 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.2□□□□□ -1.42
GPNMB-210ENST00000478451 UBE3DQ7Z6J8 389 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 TOP6BLQ8N6T0 577 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 PLPPR2Q96GM1 343 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 CRELD1Q96HD1 420 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 VTI1BQ9UEU0 232 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 ZC3H7BQ9UGR2 993 aaKnown RBP6.2□□□□□ -1.42
GPNMB-210ENST00000478451 ANGEL1Q9UNK9 670 aaKnown RBP6.2□□□□□ -1.42
GPNMB-210ENST00000478451 CLSPNQ9HAW4 1339 aa6.2□□□□□ -1.42
GPNMB-210ENST00000478451 LEFTY1O75610 366 aa6.19□□□□□ -1.42
GPNMB-210ENST00000478451 PRNPP04156 253 aa6.19□□□□□ -1.42
GPNMB-210ENST00000478451 WIPI1Q5MNZ9 446 aaPredicted RBP6.19□□□□□ -1.42
GPNMB-210ENST00000478451 AGMOQ6ZNB7 445 aa6.19□□□□□ -1.42
GPNMB-210ENST00000478451 HDXQ7Z353 690 aa6.19□□□□□ -1.42
GPNMB-210ENST00000478451 VSIG10LQ86VR7 867 aa6.19□□□□□ -1.42
GPNMB-210ENST00000478451 ZNF428Q96B54 188 aa6.19□□□□□ -1.42
GPNMB-210ENST00000478451 NOC4LQ9BVI4 516 aaKnown RBP6.19□□□□□ -1.42
GPNMB-210ENST00000478451 DUSP23Q9BVJ7 150 aa6.19□□□□□ -1.42
GPNMB-210ENST00000478451 BSDC1Q9NW68 430 aaPredicted RBP6.19□□□□□ -1.42
GPNMB-210ENST00000478451 CCDC39Q9UFE4 941 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms