RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 HMGB1P09429 215 aaKnown RBP11.17□□□□□ -0.62
COL13A1-207ENST00000478219 GNGT1P63211 74 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 PIP4K2BP78356 416 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 RESP18Q5W5W9 173 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 CTCFLQ8NI51 663 aaPredicted RBP11.17□□□□□ -0.62
COL13A1-207ENST00000478219 SELENOOQ9BVL4 669 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 FAM107BQ9H098 131 aa11.17□□□□□ -0.62
COL13A1-207ENST00000478219 GNL3LQ9NVN8 582 aaKnown RBP11.17□□□□□ -0.62
COL13A1-207ENST00000478219 EIF3HO15372 352 aaKnown RBP eCLIP11.16□□□□□ -0.62
COL13A1-207ENST00000478219 ATP5JP18859 108 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 MRPS25P82663 173 aaKnown RBP11.16□□□□□ -0.62
COL13A1-207ENST00000478219 TFCP2Q12800 502 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 RPAINQ86UA6 219 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 RRP36Q96EU6 259 aaKnown RBP11.16□□□□□ -0.62
COL13A1-207ENST00000478219 CAPZA3Q96KX2 299 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 CAPS2Q9BXY5 557 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 KCNH3Q9ULD8 1083 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 FLT4P35916 1363 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 TOPAZ1Q8N9V7 1692 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 GYPCP04921 128 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 PAX7P23759 505 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 STX17P56962 302 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 HAND2P61296 217 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 CCDC102BQ68D86 513 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 BRAPQ7Z569 592 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 CCDC148Q8NFR7 591 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 NKX2-3Q8TAU0 364 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 FAXDC2Q96IV6 333 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 CABS1Q96KC9 395 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 MAP3K14Q99558 947 aa11.16□□□□□ -0.62
COL13A1-207ENST00000478219 SBNO1A3KN83 1393 aa11.15□□□□□ -0.62
COL13A1-207ENST00000478219 C21orf2O43822 256 aa11.15□□□□□ -0.62
COL13A1-207ENST00000478219 MFAP3LO75121 409 aa11.15□□□□□ -0.62
COL13A1-207ENST00000478219 HSPD1P10809 573 aaKnown RBP11.15□□□□□ -0.62
COL13A1-207ENST00000478219 ENOX1Q8TC92 643 aaKnown RBP11.15□□□□□ -0.62
COL13A1-207ENST00000478219 MIEF2Q96C03 454 aa11.15□□□□□ -0.62
COL13A1-207ENST00000478219 SLF1Q9BQI6 1058 aa11.15□□□□□ -0.62
COL13A1-207ENST00000478219 MCM8Q9UJA3 840 aa11.15□□□□□ -0.62
COL13A1-207ENST00000478219 KLF18A0A0U1RQI7 1052 aa11.15□□□□□ -0.63
COL13A1-207ENST00000478219 MYO1BO43795 1136 aa11.15□□□□□ -0.63
COL13A1-207ENST00000478219 ATP1A1P05023 1023 aaKnown RBP11.15□□□□□ -0.63
COL13A1-207ENST00000478219 RXRAP19793 462 aa11.15□□□□□ -0.63
COL13A1-207ENST00000478219 ELF1P32519 619 aa11.15□□□□□ -0.63
COL13A1-207ENST00000478219 PBX1P40424 430 aa11.15□□□□□ -0.63
COL13A1-207ENST00000478219 ACTN3Q08043 901 aaPredicted RBP11.15□□□□□ -0.63
COL13A1-207ENST00000478219 AIMP1Q12904 312 aaKnown RBP11.15□□□□□ -0.63
COL13A1-207ENST00000478219 MAP9Q49MG5 647 aa11.15□□□□□ -0.63
COL13A1-207ENST00000478219 TNNI3KQ59H18 835 aa11.15□□□□□ -0.63
COL13A1-207ENST00000478219 VPS37DQ86XT2 251 aa11.15□□□□□ -0.63
COL13A1-207ENST00000478219 KIRREL3Q8IZU9 778 aa11.15□□□□□ -0.63
COL13A1-207ENST00000478219 REXO2Q9Y3B8 237 aaKnown RBP11.15□□□□□ -0.63
COL13A1-207ENST00000478219 FPGT-TNNI3KV9GXZ4 949 aa11.15□□□□□ -0.63
COL13A1-207ENST00000478219 USP6P35125 1406 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 FAM237AA0A1B0GTK4 181 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 GOLGA8BA8MQT2 603 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 PPFIA1Q13136 1202 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 PDCLQ13371 301 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 KLHL10Q6JEL2 608 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 KSR2Q6VAB6 950 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 TRAPPC11Q7Z392 1133 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 PPFIBP1Q86W92 1011 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 N4BP2L2Q92802 583 aaPredicted RBP11.14□□□□□ -0.63
COL13A1-207ENST00000478219 ARL8AQ96BM9 186 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 CRACR2AQ9BSW2 395 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 SLC24A3Q9HC58 644 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 GUCA1BQ9UMX6 200 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 H0YHG0 523 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 PDE2AO00408 941 aaPredicted RBP11.14□□□□□ -0.63
COL13A1-207ENST00000478219 ZNF185O15231 689 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
COL13A1-207ENST00000478219 CASP1P29466 404 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 USP8P40818 1118 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 POSTNQ15063 836 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 EZH2Q15910 746 aaKnown RBP11.14□□□□□ -0.63
COL13A1-207ENST00000478219 FKBP15Q5T1M5 1219 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 EGFL6Q8IUX8 553 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 NUTM2AQ8IVF1 878 aaPredicted RBP11.14□□□□□ -0.63
COL13A1-207ENST00000478219 GIMAP7Q8NHV1 300 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 SH3GL2Q99962 352 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 A1CFQ9NQ94 594 aaKnown RBP11.14□□□□□ -0.63
COL13A1-207ENST00000478219 SERTAD1Q9UHV2 236 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 DENND2AQ9ULE3 1009 aa11.14□□□□□ -0.63
COL13A1-207ENST00000478219 GOLGA6BA6NDN3 693 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 GOLIM4O00461 696 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 IGKV5-2P06315 115 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 DDR1Q08345 913 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 TUBB2AQ13885 445 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 MORC3Q14149 939 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 SMYD4Q8IYR2 804 aaPredicted RBP11.13□□□□□ -0.63
COL13A1-207ENST00000478219 HDAC7Q8WUI4 952 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 SGSM3Q96HU1 749 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 CHP1Q99653 195 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 TUBB2BQ9BVA1 445 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 ESF1Q9H501 851 aaKnown RBP11.13□□□□□ -0.63
COL13A1-207ENST00000478219 HOOK1Q9UJC3 728 aaKnown RBP11.13□□□□□ -0.63
COL13A1-207ENST00000478219 NWD1Q149M9 1564 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 SHTN1A0MZ66 631 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 FRMD3A2A2Y4 597 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 PPP6R2O75170 966 aa11.13□□□□□ -0.63
COL13A1-207ENST00000478219 SARSP49591 514 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms