RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 SIPA1L1O43166 1804 aa16.78■□□□□ 0.28
HDAC7-222ENST00000477937 FAM196BA6NMK8 535 aa16.78■□□□□ 0.28
HDAC7-222ENST00000477937 DYNLL1P63167 89 aaKnown RBP16.78■□□□□ 0.28
HDAC7-222ENST00000477937 ARHGEF6Q15052 776 aa16.78■□□□□ 0.28
HDAC7-222ENST00000477937 MAPKAPK5Q8IW41 473 aa16.78■□□□□ 0.28
HDAC7-222ENST00000477937 EFCC1Q9HA90 598 aa16.78■□□□□ 0.28
HDAC7-222ENST00000477937 AFG3L2Q9Y4W6 797 aa16.78■□□□□ 0.28
HDAC7-222ENST00000477937 PDHXO00330 501 aa16.77■□□□□ 0.28
HDAC7-222ENST00000477937 FASTKD5Q7L8L6 764 aaKnown RBP16.77■□□□□ 0.28
HDAC7-222ENST00000477937 FOXP4Q8IVH2 680 aaPredicted RBP16.77■□□□□ 0.28
HDAC7-222ENST00000477937 MIGA1Q8NAN2 632 aa16.77■□□□□ 0.28
HDAC7-222ENST00000477937 YTHDC1Q96MU7 727 aaKnown RBP16.77■□□□□ 0.28
HDAC7-222ENST00000477937 DNAJC2Q99543 621 aaKnown RBP16.77■□□□□ 0.28
HDAC7-222ENST00000477937 TRIM34Q9BYJ4 488 aa16.77■□□□□ 0.28
HDAC7-222ENST00000477937 A0A0G2JLL6 359 aaPredicted RBP16.76■□□□□ 0.27
HDAC7-222ENST00000477937 GOLIM4O00461 696 aa16.76■□□□□ 0.27
HDAC7-222ENST00000477937 USP5P45974 858 aa16.76■□□□□ 0.27
HDAC7-222ENST00000477937 RGS19P49795 217 aa16.76■□□□□ 0.27
HDAC7-222ENST00000477937 MOGSQ13724 837 aa16.76■□□□□ 0.27
HDAC7-222ENST00000477937 SLC9C2Q5TAH2 1124 aa16.76■□□□□ 0.27
HDAC7-222ENST00000477937 PRRT2Q7Z6L0 340 aaPredicted RBP16.76■□□□□ 0.27
HDAC7-222ENST00000477937 PALD1Q9ULE6 856 aa16.76■□□□□ 0.27
HDAC7-222ENST00000477937 MYH7P12883 1935 aa16.76■□□□□ 0.27
HDAC7-222ENST00000477937 HLA-DOAP06340 250 aa16.75■□□□□ 0.27
HDAC7-222ENST00000477937 ATP5JP18859 108 aa16.75■□□□□ 0.27
HDAC7-222ENST00000477937 CAP2P40123 477 aa16.75■□□□□ 0.27
HDAC7-222ENST00000477937 RRP1P56182 461 aaKnown RBP16.75■□□□□ 0.27
HDAC7-222ENST00000477937 KIF22Q14807 665 aa16.75■□□□□ 0.27
HDAC7-222ENST00000477937 CRACR2BQ8N4Y2 399 aaPredicted RBP16.75■□□□□ 0.27
HDAC7-222ENST00000477937 TBC1D2Q9BYX2 928 aa16.75■□□□□ 0.27
HDAC7-222ENST00000477937 BOLA2Q9H3K6 86 aa16.75■□□□□ 0.27
HDAC7-222ENST00000477937 SAP30BPQ9UHR5 308 aaKnown RBP16.75■□□□□ 0.27
HDAC7-222ENST00000477937 MAGEB6P1A0A0J9YX57 407 aa16.74■□□□□ 0.27
HDAC7-222ENST00000477937 TRIM75PA6NK02 468 aa16.74■□□□□ 0.27
HDAC7-222ENST00000477937 SMARCA5O60264 1052 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-222ENST00000477937 PDE6AP16499 860 aa16.74■□□□□ 0.27
HDAC7-222ENST00000477937 MLLT1Q03111 559 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-222ENST00000477937 GPAT2Q6NUI2 795 aa16.74■□□□□ 0.27
HDAC7-222ENST00000477937 GADL1Q6ZQY3 521 aa16.74■□□□□ 0.27
HDAC7-222ENST00000477937 METTL16Q86W50 562 aaKnown RBP16.74■□□□□ 0.27
HDAC7-222ENST00000477937 DCTPP1Q9H773 170 aa16.74■□□□□ 0.27
HDAC7-222ENST00000477937 PAG1Q9NWQ8 432 aa16.74■□□□□ 0.27
HDAC7-222ENST00000477937 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.74■□□□□ 0.27
HDAC7-222ENST00000477937 PTPN22Q9Y2R2 807 aa16.74■□□□□ 0.27
HDAC7-222ENST00000477937 USP17L5A8MUK1 530 aa16.73■□□□□ 0.27
HDAC7-222ENST00000477937 C17orf99Q6UX52 265 aa16.73■□□□□ 0.27
HDAC7-222ENST00000477937 CCDC84Q86UT8 332 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-222ENST00000477937 PARK7Q99497 189 aaKnown RBP16.73■□□□□ 0.27
HDAC7-222ENST00000477937 HAUS7Q99871 368 aa16.73■□□□□ 0.27
HDAC7-222ENST00000477937 AS3MTQ9HBK9 375 aa16.73■□□□□ 0.27
HDAC7-222ENST00000477937 CPA4Q9UI42 421 aa16.73■□□□□ 0.27
HDAC7-222ENST00000477937 SLC45A1Q9Y2W3 748 aa16.73■□□□□ 0.27
HDAC7-222ENST00000477937 ZNF532Q9HCE3 1301 aa16.72■□□□□ 0.27
HDAC7-222ENST00000477937 MGAMO43451 1857 aa16.72■□□□□ 0.27
HDAC7-222ENST00000477937 SOX10P56693 466 aa16.72■□□□□ 0.27
HDAC7-222ENST00000477937 LACTBP83111 547 aaPredicted RBP16.72■□□□□ 0.27
HDAC7-222ENST00000477937 CAP1Q01518 475 aa16.72■□□□□ 0.27
HDAC7-222ENST00000477937 SPP2Q13103 211 aa16.72■□□□□ 0.27
HDAC7-222ENST00000477937 RRP1BQ14684 758 aaKnown RBP16.72■□□□□ 0.27
HDAC7-222ENST00000477937 ZNF280CQ8ND82 737 aa16.72■□□□□ 0.27
HDAC7-222ENST00000477937 EDC3Q96F86 508 aaKnown RBP16.72■□□□□ 0.27
HDAC7-222ENST00000477937 RIOK1Q9BRS2 568 aaKnown RBP16.72■□□□□ 0.27
HDAC7-222ENST00000477937 ZSWIM8A7E2V4 1837 aa16.72■□□□□ 0.27
HDAC7-222ENST00000477937 NAV1Q8NEY1 1877 aa16.71■□□□□ 0.27
HDAC7-222ENST00000477937 ASNSP08243 561 aa16.71■□□□□ 0.27
HDAC7-222ENST00000477937 SLC4A8Q2Y0W8 1093 aa16.71■□□□□ 0.27
HDAC7-222ENST00000477937 TTC6Q86TZ1 520 aa16.71■□□□□ 0.27
HDAC7-222ENST00000477937 CRNKL1Q9BZJ0 848 aaKnown RBP16.71■□□□□ 0.27
HDAC7-222ENST00000477937 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.71■□□□□ 0.279e-9■■■■■ 27.4
HDAC7-222ENST00000477937 DNAJC18Q9H819 358 aa16.71■□□□□ 0.27
HDAC7-222ENST00000477937 GINM1Q9NU53 330 aa16.71■□□□□ 0.27
HDAC7-222ENST00000477937 PCDHB15Q9Y5E8 787 aa16.71■□□□□ 0.27
HDAC7-222ENST00000477937 ADGRA2Q96PE1 1338 aa16.7■□□□□ 0.26
HDAC7-222ENST00000477937 LOC285556D6RIA3 1793 aa16.7■□□□□ 0.26
HDAC7-222ENST00000477937 TCRBV5S4A2TA0A5A2 114 aa16.7■□□□□ 0.26
HDAC7-222ENST00000477937 GNRH1P01148 92 aa16.7■□□□□ 0.26
HDAC7-222ENST00000477937 CYP2C8P10632 490 aa16.7■□□□□ 0.26
HDAC7-222ENST00000477937 PROCA1Q8NCQ7 364 aaPredicted RBP16.7■□□□□ 0.26
HDAC7-222ENST00000477937 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
HDAC7-222ENST00000477937 ECHDC1Q9NTX5 307 aa16.7■□□□□ 0.26
HDAC7-222ENST00000477937 AGTPBP1Q9UPW5 1226 aa16.7■□□□□ 0.26
HDAC7-222ENST00000477937 POLR3DP05423 398 aaPredicted RBP16.69■□□□□ 0.26
HDAC7-222ENST00000477937 ADD2P35612 726 aa16.69■□□□□ 0.26
HDAC7-222ENST00000477937 ZSCAN25Q6NSZ9 544 aa16.69■□□□□ 0.26
HDAC7-222ENST00000477937 WDR18Q9BV38 432 aa16.69■□□□□ 0.26
HDAC7-222ENST00000477937 ARHGAP39Q9C0H5 1083 aa16.69■□□□□ 0.26
HDAC7-222ENST00000477937 EHD4Q9H223 541 aa16.69■□□□□ 0.26
HDAC7-222ENST00000477937 SERPINB13Q9UIV8 391 aa16.69■□□□□ 0.26
HDAC7-222ENST00000477937 PNMA3Q9UL41 463 aa16.69■□□□□ 0.26
HDAC7-222ENST00000477937 DDX60LQ5H9U9 1706 aaKnown RBP16.68■□□□□ 0.26
HDAC7-222ENST00000477937 GDF11O95390 407 aa16.68■□□□□ 0.26
HDAC7-222ENST00000477937 PSMC4P43686 418 aa16.68■□□□□ 0.26
HDAC7-222ENST00000477937 HMGCS2P54868 508 aa16.68■□□□□ 0.26
HDAC7-222ENST00000477937 PRMT2P55345 433 aa16.68■□□□□ 0.26
HDAC7-222ENST00000477937 PABPC4Q13310 644 aaKnown RBP eCLIP16.68■□□□□ 0.26
HDAC7-222ENST00000477937 SH3D19Q5HYK7 790 aa16.68■□□□□ 0.26
HDAC7-222ENST00000477937 SMCR8Q8TEV9 937 aaPredicted RBP16.68■□□□□ 0.26
HDAC7-222ENST00000477937 MYH8P13535 1937 aa16.68■□□□□ 0.26
HDAC7-222ENST00000477937 BAZ2AQ9UIF9 1905 aaKnown RBP16.68■□□□□ 0.26
HDAC7-222ENST00000477937 ECM2O94769 699 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms