RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 MIGA2Q7L4E1 593 aa23.79■■□□□ 1.4
ACTB-210ENST00000477812 FOXP4Q8IVH2 680 aaPredicted RBP23.79■■□□□ 1.4
ACTB-210ENST00000477812 ANO2Q9NQ90 1003 aa23.79■■□□□ 1.4
ACTB-210ENST00000477812 SERPINB13Q9UIV8 391 aa23.79■■□□□ 1.4
ACTB-210ENST00000477812 ANAPC4Q9UJX5 808 aa23.79■■□□□ 1.4
ACTB-210ENST00000477812 FZD1Q9UP38 647 aa23.79■■□□□ 1.4
ACTB-210ENST00000477812 FAM196BA6NMK8 535 aa23.78■■□□□ 1.4
ACTB-210ENST00000477812 KIAA1211Q6ZU35 1233 aa23.78■■□□□ 1.4
ACTB-210ENST00000477812 NBPF3Q9H094 633 aa23.78■■□□□ 1.4
ACTB-210ENST00000477812 HERC5Q9UII4 1024 aaKnown RBP23.78■■□□□ 1.4
ACTB-210ENST00000477812 TAOK2Q9UL54 1235 aa23.78■■□□□ 1.4
ACTB-210ENST00000477812 PHF20L1A8MW92 1017 aa23.77■■□□□ 1.4
ACTB-210ENST00000477812 USP2O75604 605 aaPredicted RBP23.77■■□□□ 1.4
ACTB-210ENST00000477812 NF2P35240 595 aa23.77■■□□□ 1.4
ACTB-210ENST00000477812 PPARAQ07869 468 aa23.77■■□□□ 1.4
ACTB-210ENST00000477812 MAP3K11Q16584 847 aa23.77■■□□□ 1.4
ACTB-210ENST00000477812 DCAF15Q66K64 600 aa23.77■■□□□ 1.4
ACTB-210ENST00000477812 AMOTL1Q8IY63 956 aa23.77■■□□□ 1.4
ACTB-210ENST00000477812 ZNF408Q9H9D4 720 aa23.77■■□□□ 1.4
ACTB-210ENST00000477812 ZNF112Q9UJU3 913 aa23.77■■□□□ 1.4
ACTB-210ENST00000477812 RBM8AQ9Y5S9 174 aaKnown RBP23.77■■□□□ 1.4
ACTB-210ENST00000477812 U3KPZ7 1027 aaPredicted RBP23.77■■□□□ 1.4
ACTB-210ENST00000477812 OTOFQ9HC10 1997 aa23.76■■□□□ 1.39
ACTB-210ENST00000477812 MINDY4BA8MYZ0 360 aa23.76■■□□□ 1.39
ACTB-210ENST00000477812 FKBP1BP68106 108 aa23.76■■□□□ 1.39
ACTB-210ENST00000477812 C16orf86Q6ZW13 317 aa23.76■■□□□ 1.39
ACTB-210ENST00000477812 MOB2Q70IA6 237 aa23.76■■□□□ 1.39
ACTB-210ENST00000477812 SLC44A5Q8NCS7 719 aa23.76■■□□□ 1.39
ACTB-210ENST00000477812 DYNLL2Q96FJ2 89 aa23.76■■□□□ 1.39
ACTB-210ENST00000477812 TACC3Q9Y6A5 838 aa23.76■■□□□ 1.39
ACTB-210ENST00000477812 REC8O95072 547 aa23.75■■□□□ 1.39
ACTB-210ENST00000477812 SHMT1P34896 483 aa23.75■■□□□ 1.39
ACTB-210ENST00000477812 RRP1BQ14684 758 aaKnown RBP23.75■■□□□ 1.39
ACTB-210ENST00000477812 TATDN1Q6P1N9 297 aa23.75■■□□□ 1.39
ACTB-210ENST00000477812 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.75■■□□□ 1.39
ACTB-210ENST00000477812 KLRG1Q96E93 195 aa23.75■■□□□ 1.39
ACTB-210ENST00000477812 ZNF341Q9BYN7 854 aa23.75■■□□□ 1.39
ACTB-210ENST00000477812 GBA2Q9HCG7 927 aaPredicted RBP23.75■■□□□ 1.39
ACTB-210ENST00000477812 CTNNA3Q9UI47 895 aa23.75■■□□□ 1.39
ACTB-210ENST00000477812 PPP1R12BO60237 982 aaPredicted RBP23.74■■□□□ 1.39
ACTB-210ENST00000477812 TBC1D10CQ8IV04 446 aa23.74■■□□□ 1.39
ACTB-210ENST00000477812 CRACR2BQ8N4Y2 399 aaPredicted RBP23.74■■□□□ 1.39
ACTB-210ENST00000477812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.74■■□□□ 1.392e-7■■□□□ 13.5
ACTB-210ENST00000477812 EPB41L2O43491 1005 aaKnown RBP23.73■■□□□ 1.39
ACTB-210ENST00000477812 SEC24BO95487 1268 aa23.73■■□□□ 1.39
ACTB-210ENST00000477812 FGRP09769 529 aa23.73■■□□□ 1.39
ACTB-210ENST00000477812 HAND2P61296 217 aa23.73■■□□□ 1.39
ACTB-210ENST00000477812 PRKG1Q13976 671 aa23.73■■□□□ 1.39
ACTB-210ENST00000477812 NECTIN1Q15223 517 aa23.73■■□□□ 1.39
ACTB-210ENST00000477812 LDLRAD1Q5T700 205 aa23.73■■□□□ 1.39
ACTB-210ENST00000477812 SWAP70Q9UH65 585 aa23.73■■□□□ 1.39
ACTB-210ENST00000477812 ANGEL1Q9UNK9 670 aaKnown RBP23.73■■□□□ 1.39
ACTB-210ENST00000477812 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.73■■□□□ 1.393e-23■■□□□ 14.2
ACTB-210ENST00000477812 CYP21A2P08686 494 aa23.72■■□□□ 1.39
ACTB-210ENST00000477812 CDK8P49336 464 aa23.72■■□□□ 1.39
ACTB-210ENST00000477812 CTDSPL2Q05D32 466 aa23.72■■□□□ 1.39
ACTB-210ENST00000477812 WRNIP1Q96S55 665 aa23.72■■□□□ 1.39
ACTB-210ENST00000477812 TAF6LQ9Y6J9 622 aa23.72■■□□□ 1.39
ACTB-210ENST00000477812 ZNF213O14771 459 aa23.71■■□□□ 1.39
ACTB-210ENST00000477812 INPP5BP32019 993 aa23.71■■□□□ 1.39
ACTB-210ENST00000477812 IMMTQ16891 758 aaKnown RBP23.71■■□□□ 1.39
ACTB-210ENST00000477812 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.71■■□□□ 1.39
ACTB-210ENST00000477812 ARMC9Q7Z3E5 817 aa23.71■■□□□ 1.39
ACTB-210ENST00000477812 USP26Q9BXU7 913 aa23.71■■□□□ 1.39
ACTB-210ENST00000477812 TMEM88BA6NKF7 163 aa23.7■■□□□ 1.38
ACTB-210ENST00000477812 UBE2Q2LH0YL09 131 aa23.7■■□□□ 1.38
ACTB-210ENST00000477812 IREB2P48200 963 aaKnown RBP23.7■■□□□ 1.38
ACTB-210ENST00000477812 APLP1P51693 650 aa23.7■■□□□ 1.38
ACTB-210ENST00000477812 JAG1P78504 1218 aa23.7■■□□□ 1.38
ACTB-210ENST00000477812 NOL9Q5SY16 702 aaKnown RBP23.7■■□□□ 1.38
ACTB-210ENST00000477812 SAPCD2Q86UD0 394 aa23.7■■□□□ 1.38
ACTB-210ENST00000477812 C2orf69Q8N8R5 385 aa23.7■■□□□ 1.38
ACTB-210ENST00000477812 STAG1Q8WVM7 1258 aa23.7■■□□□ 1.38
ACTB-210ENST00000477812 SLC27A2O14975 620 aa23.69■■□□□ 1.38
ACTB-210ENST00000477812 ORC4O43929 436 aa23.69■■□□□ 1.38
ACTB-210ENST00000477812 RASA1P20936 1047 aa23.69■■□□□ 1.38
ACTB-210ENST00000477812 VGLL4Q14135 290 aa23.69■■□□□ 1.38
ACTB-210ENST00000477812 TTLL12Q14166 644 aaPredicted RBP23.69■■□□□ 1.38
ACTB-210ENST00000477812 SHROOM1Q2M3G4 852 aaPredicted RBP23.69■■□□□ 1.38
ACTB-210ENST00000477812 CREB3L3Q68CJ9 461 aa23.69■■□□□ 1.38
ACTB-210ENST00000477812 STK11IPQ8N1F8 1099 aa23.69■■□□□ 1.38
ACTB-210ENST00000477812 TRIM34Q9BYJ4 488 aa23.69■■□□□ 1.38
ACTB-210ENST00000477812 INCENPQ9NQS7 918 aa23.69■■□□□ 1.38
ACTB-210ENST00000477812 TLL2Q9Y6L7 1015 aa23.69■■□□□ 1.38
ACTB-210ENST00000477812 DOCK1Q14185 1865 aa23.68■■□□□ 1.38
ACTB-210ENST00000477812 UNCXA6NJT0 531 aa23.68■■□□□ 1.38
ACTB-210ENST00000477812 CTNND1O60716 968 aaKnown RBP23.68■■□□□ 1.38
ACTB-210ENST00000477812 SLC3A2P08195 630 aaKnown RBP23.68■■□□□ 1.38
ACTB-210ENST00000477812 PCP11498 1178 aaKnown RBP23.68■■□□□ 1.38
ACTB-210ENST00000477812 HSPA4P34932 840 aa23.68■■□□□ 1.38
ACTB-210ENST00000477812 CAP2P40123 477 aa23.68■■□□□ 1.38
ACTB-210ENST00000477812 MAP3K9P80192 1104 aa23.68■■□□□ 1.38
ACTB-210ENST00000477812 AKNAD1Q5T1N1 836 aa23.68■■□□□ 1.38
ACTB-210ENST00000477812 NKX2-3Q8TAU0 364 aa23.68■■□□□ 1.38
ACTB-210ENST00000477812 KCNB2Q92953 911 aa23.68■■□□□ 1.38
ACTB-210ENST00000477812 CLMNQ96JQ2 1002 aa23.68■■□□□ 1.38
ACTB-210ENST00000477812 SNCAIPQ9Y6H5 919 aa23.68■■□□□ 1.38
ACTB-210ENST00000477812 MYH8P13535 1937 aa23.67■■□□□ 1.38
ACTB-210ENST00000477812 GREB1LQ9C091 1923 aaPredicted RBP23.67■■□□□ 1.38
ACTB-210ENST00000477812 NEDD4P46934 1319 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms